Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f24f
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    27   0.14 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    27   0.14 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.1  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   7.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   7.2  

>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 71  VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 193
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVLSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +2

Query: 71  VLTAIVAVSTNEVADPRSTDRANALSIGSITSSDRLLRSFV 193
           VL   VAV +   A  + T + + + +  I  SDRLL+++V
Sbjct: 5   VLVLFVAVVSVVFAADKYTTKYDNIDLNQILKSDRLLKNYV 45


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +1

Query: 355 CERAAKSIFFYRTNLGTLKCIFWTFTCKYTKF 450
           C++ +   F   T LGT   I+    CK  +F
Sbjct: 41  CDKISAICFLLSTILGTCWIIYVRIYCKEIRF 72


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +3

Query: 447 VFVFLFAQKIRSPHFXN**FAYLLRSFLVFFFRTV 551
           VF+  FAQ + SP F N  + Y   +    F R V
Sbjct: 141 VFILFFAQGLTSPIF-NLVYVYCCDNNFNVFLRQV 174


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 424 TFTCKYTKFLFFCLHKKFVLPI 489
           +F   Y +FL+ C H   +L I
Sbjct: 136 SFIENYCQFLYNCFHSTLLLMI 157



 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -2

Query: 549 QSEKKRQGSFVINTRIINXKNGENEFFVQTKKQKLRV 439
           + +K + G FV   R    K    +FF+  K   L+V
Sbjct: 269 ERDKNKLGDFVALIRDAQVKITAADFFILDKSTILKV 305


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,151
Number of Sequences: 336
Number of extensions: 2294
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)