Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f15f
         (632 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.9  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   6.5  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +1

Query: 202 NYQFEWRHFQQNFNSFTVISCYIIIE 279
           NYQ    + +  F  F V+ CY+  E
Sbjct: 518 NYQSLAHYLRVFFTVFNVVHCYLASE 543


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 24  RFRFECE*RAPAS 62
           RFR+ECE R+  S
Sbjct: 77  RFRYECEGRSAGS 89


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 452 CVLSLKYLLDVCALIFFACNLATIDLARWHFVCFF 556
           C L +  LL    L+ + C  AT +  +   +CF+
Sbjct: 286 CALWITTLLLFTILLAYGCAGATSEAEKIAKICFY 320


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +2

Query: 437 YFNSECVLSLKYLLDVCALIFFAC 508
           YF S  ++   +LL  C LI   C
Sbjct: 214 YFYSAFIIFTIHLLFYCVLIILLC 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,841
Number of Sequences: 336
Number of extensions: 2903
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)