Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f15f
         (632 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0550 - 11413912-11414079,11414338-11414513,11414617-114146...    30   1.8  
01_01_1120 - 8884760-8885017,8886088-8886150,8887365-8887627,888...    28   5.4  

>02_02_0550 -
           11413912-11414079,11414338-11414513,11414617-11414629,
           11414844-11414871,11415447-11415784
          Length = 240

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -2

Query: 193 LMNIIVRGRSQGYLKLWVSHQYRTSNFNLPL 101
           ++ +I++G S GY K+W  H+YR  N N+ +
Sbjct: 120 VIKVILQGLSMGYKKVW-WHKYRNLNKNIDI 149


>01_01_1120 -
           8884760-8885017,8886088-8886150,8887365-8887627,
           8887728-8887882,8888194-8888465,8889593-8889735,
           8890150-8890444
          Length = 482

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -3

Query: 495 ISAHTSSKYFKDRTHSELK 439
           I +HT+++Y+K RTH  LK
Sbjct: 219 IDSHTTAEYWKTRTHDRLK 237


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,650,101
Number of Sequences: 37544
Number of extensions: 229670
Number of successful extensions: 325
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 325
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)