Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f15f
(632 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chlor... 23 3.3
DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chlor... 23 3.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 21 7.5
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 7.5
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 21 7.5
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 21 9.9
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 21 9.9
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 21 9.9
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 21 9.9
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 9.9
>DQ667186-1|ABG75738.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 476 LDVCALIFFACNLATIDLARWHFVCFFEQ 562
+DV + IFF A +LA W F E+
Sbjct: 415 IDVISRIFFPIVFAFFNLAYWSTYLFREE 443
>DQ667185-1|ABG75737.1| 447|Apis mellifera glutamate-gated chloride
channel protein.
Length = 447
Score = 22.6 bits (46), Expect = 3.3
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 476 LDVCALIFFACNLATIDLARWHFVCFFEQ 562
+DV + IFF A +LA W F E+
Sbjct: 415 IDVISRIFFPIVFAFFNLAYWSTYLFREE 443
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 24 RFRFECE*RAPAS 62
RFR+ECE R+ S
Sbjct: 59 RFRYECEGRSAGS 71
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein
protein.
Length = 602
Score = 21.4 bits (43), Expect = 7.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 24 RFRFECE*RAPAS 62
RFR+ECE R+ S
Sbjct: 59 RFRYECEGRSAGS 71
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.4 bits (43), Expect = 7.5
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +3
Query: 126 RYW*LTHSFKYP 161
RYW +T F YP
Sbjct: 144 RYWAITDPFTYP 155
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 3 VYNLCSGRFRFECE*RAPASKCIYCIKLKIVCVKGRLK 116
+++ C GR + C P CI VC G L+
Sbjct: 42 IFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLR 79
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +3
Query: 3 VYNLCSGRFRFECE*RAPASKCIYCIKLKIVCVKGRLK 116
+++ C GR + C P CI VC G L+
Sbjct: 42 IFSRCDGRCQRFCPNVVPKPLCIKICAPGCVCRLGYLR 79
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 21.0 bits (42), Expect = 9.9
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = +1
Query: 208 QFEWRHFQQNFNS 246
+++W++F NF S
Sbjct: 35 KYQWKYFDYNFGS 47
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 21.0 bits (42), Expect = 9.9
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +1
Query: 514 SND*FSTLAFRVFL*TNLI 570
S D S+LAFRVF T I
Sbjct: 304 SRDFLSSLAFRVFQSTQYI 322
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/22 (36%), Positives = 12/22 (54%)
Frame = +2
Query: 464 LKYLLDVCALIFFACNLATIDL 529
+KYLL + +F C L + L
Sbjct: 8 IKYLLFIFNFVFAVCGLGILTL 29
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,936
Number of Sequences: 438
Number of extensions: 3075
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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