Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f13r
         (732 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    23   2.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   4.4  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   7.8  

>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = -1

Query: 384 ETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEE 226
           + E A   E     VR +     K KPNW + LE  +       QK  K +E+
Sbjct: 69  QNECAKCNEKHKEGVRKVLHHLIKNKPNWWQELEAKFDPKGEYKQKYNKLLEK 121


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 374 RPGVRKQGIQWLEPCRKRKR 315
           R G+ +Q  QW +PCR R++
Sbjct: 577 RYGLDQQN-QWCKPCRPREQ 595


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -2

Query: 374 RPGVRKQGIQWLEPCRKRKR 315
           R G+ +Q  QW +PCR R++
Sbjct: 469 RYGLDQQN-QWCKPCRPREQ 487


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -1

Query: 141 IIFMVYCLFGVFILFTV*IFF 79
           I+  VY  +  FI+FTV + F
Sbjct: 109 ILLCVYYFYYAFIIFTVHLLF 129



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/29 (27%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
 Frame = -1

Query: 159 DIHIVKIIFM--VYCLFGVFILFTV*IFF 79
           D   + ++F+  +Y  +  FI+FT+ + F
Sbjct: 200 DYFTLHLLFLPCIYYFYSAFIIFTIHLLF 228



 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 150 IVKIIFMVYCLFGVFILFTV 91
           ++ I+  +Y  +  FILFTV
Sbjct: 231 VLIILLCIYYFYYAFILFTV 250


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = -1

Query: 549 KPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQK 454
           K VL EA+       +    ++AYRS++ ++K
Sbjct: 61  KRVLPEALQTNCAKCTEKQRTAAYRSIKRLKK 92


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,184
Number of Sequences: 336
Number of extensions: 3429
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)