Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f13r
(732 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 26 0.42
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 24 1.7
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.7
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 23 3.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 23 3.9
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 5.2
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 5.2
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 5.2
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 9.0
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.0
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 25.8 bits (54), Expect = 0.42
Identities = 15/86 (17%), Positives = 36/86 (41%)
Frame = -3
Query: 319 KEKETKLERDARRCLL*NATQASKTNEANGGTSKEVSRALPAQSTRERLNNYCRYSHC*N 140
+E+E K ++ T ++ + + + + + S + +NY Y++ N
Sbjct: 276 REREQKSYKNENSYRKYRETSKERSRDRKERERSKEPKIISSLSNNYKYSNYNNYNNYNN 335
Query: 139 YFYGLLSFRCFYSIYCLNILQFQLEI 62
Y + + +Y Y +NI Q + +
Sbjct: 336 NNYNNYNKKLYYKNYIINIEQIPVPV 361
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.8 bits (49), Expect = 1.7
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1
Query: 289 HLFPVWFLFLFRFLHGSNHCIPC 357
++FPV F+ + LHG C C
Sbjct: 6 NIFPVLFVIINVLLHGQVICFVC 28
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 23.8 bits (49), Expect = 1.7
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = -1
Query: 366 SKEARDTVVRTMQEAEKKKKPNWKEM 289
+++ V T+Q K K P WK++
Sbjct: 729 NRQVNSAVKSTIQSLMKLKSPEWKDL 754
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 3.9
Identities = 7/16 (43%), Positives = 13/16 (81%)
Frame = -1
Query: 681 QYRGDGIASRGPALGL 634
+YRG+G++ +G +GL
Sbjct: 510 KYRGNGVSLKGETVGL 525
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 22.6 bits (46), Expect = 3.9
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 131 WFTVFSVFLFYLLFEYSSVST 69
WF ++FLF + E++ V+T
Sbjct: 297 WFLGCTIFLFAAMVEFAFVNT 317
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 22.6 bits (46), Expect = 3.9
Identities = 13/59 (22%), Positives = 26/59 (44%)
Frame = -1
Query: 360 EARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHYPLNQH 184
E R +V + A + +E E+ + L+ + ++ EH +K E+Y + H
Sbjct: 740 ENRSAIVHSEASANANSSTSSEESREE---KATTSLEAEKREKSEHCEKGKEYYAASFH 795
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 544 WLVVGYGKVSSSLHSIVYRKSVGPVDSER 630
++ V Y +H++VYR PV +R
Sbjct: 381 FVCVNYVGRKRPMHNVVYRPGENPVTQKR 409
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 544 WLVVGYGKVSSSLHSIVYRKSVGPVDSER 630
++ V Y +H++VYR PV +R
Sbjct: 401 FVCVNYVGRKRPMHNVVYRPGENPVTQKR 429
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 5.2
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 544 WLVVGYGKVSSSLHSIVYRKSVGPVDSER 630
++ V Y +H++VYR PV +R
Sbjct: 350 FVCVNYVGRKRPMHNVVYRPGENPVTQKR 378
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.4 bits (43), Expect = 9.0
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = -3
Query: 226 TSKEVSR-ALPAQSTRERL------NNYCRYSHC*NYFYGLLSFRCFYSIYCLNILQFQL 68
TSKE SR + ++ER NNY ++ Y Y + + +Y Y +NI Q +
Sbjct: 295 TSKERSRDRTERERSKERKIISSLSNNYNYNNNNYKYNYNNYNKKLYYKNYIINIEQIPV 354
Query: 67 EI 62
+
Sbjct: 355 PV 356
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 9.0
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Frame = -1
Query: 510 HHSTSDDSSAYRSVEEIQ-KWTKDESPLQKFKLYLEHKGYWDAETEKA--WSKEARDTVV 340
H +T+ D S E++ K K+ P + D +T SKEARD +
Sbjct: 958 HITTTIDCSTQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKDTNAVVTQSKEARDNIT 1017
Query: 339 RTMQEAEKKKKPN 301
T Q K + N
Sbjct: 1018 ATKQLNNKARIGN 1030
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,441
Number of Sequences: 438
Number of extensions: 4263
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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