Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f13r
(732 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putativ... 181 4e-46
At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putativ... 180 7e-46
At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putativ... 180 7e-46
At5g34780.1 68418.m04048 dehydrogenase E1 component family prote... 168 4e-42
At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alp... 70 1e-12
At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alp... 64 9e-11
At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alp... 60 1e-09
At2g33320.1 68415.m04084 C2 domain-containing protein low simila... 37 0.016
At5g33393.1 68418.m03983 hypothetical protein 34 0.085
At1g53110.1 68414.m06014 expressed protein 31 0.60
At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)... 31 1.0
At3g13220.1 68416.m01654 ABC transporter family protein contains... 30 1.8
At2g24930.1 68415.m02981 Ulp1 protease family protein contains P... 30 1.8
At1g32510.1 68414.m04012 no apical meristem (NAM) protein-relate... 30 1.8
At5g49945.1 68418.m06184 expressed protein strong similarity to ... 29 2.4
At4g24330.1 68417.m03492 expressed protein hypothetical protein ... 29 2.4
At2g33420.1 68415.m04096 expressed protein 29 2.4
At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein co... 29 4.2
At3g10200.1 68416.m01221 dehydration-responsive protein-related ... 29 4.2
At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containi... 29 4.2
At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes... 29 4.2
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 28 5.6
At5g52860.1 68418.m06561 ABC transporter family protein 28 7.3
At3g30640.1 68416.m03878 Ulp1 protease family protein contains P... 28 7.3
At3g28770.1 68416.m03591 expressed protein 28 7.3
At1g79430.2 68414.m09257 myb family transcription factor-related 28 7.3
At1g79430.1 68414.m09256 myb family transcription factor-related 28 7.3
At5g61280.1 68418.m07690 remorin family protein contains Pfam do... 27 9.7
At4g25750.1 68417.m03707 ABC transporter family protein Bactroce... 27 9.7
At4g01180.1 68417.m00156 XH/XS domain-containing protein contain... 27 9.7
At1g05120.1 68414.m00514 SNF2 domain-containing protein / helica... 27 9.7
>At1g21400.1 68414.m02678 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 181 bits (441), Expect = 4e-46
Identities = 83/183 (45%), Positives = 118/183 (64%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
+ + RNNG+AIST SEQ+R DGI +G A G+ ++RVDG D LAV++AV+ AR+ V
Sbjct: 289 VFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVRSAREMAVTE 348
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEK 373
+PVLIE M YRVGHHSTSDDS+ YR+ +EIQ W +P+ +F+ ++E G+W E E
Sbjct: 349 QRPVLIEMMTYRVGHHSTSDDSTKYRAADEIQYWKMSRNPVNRFRKWVEDNGWWSEEDES 408
Query: 372 AWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHYPL 193
AR +++ +Q AEK +K E+ DVY P L++Q ++E +KK P+ YP
Sbjct: 409 KLRSNARKQLLQAIQAAEKWEKQPLTELFNDVYDVKPKNLEEQELGLKELVKKQPQDYPP 468
Query: 192 NQH 184
H
Sbjct: 469 GFH 471
>At5g09300.2 68418.m01077 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 401
Score = 180 bits (439), Expect = 7e-46
Identities = 77/179 (43%), Positives = 118/179 (65%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
+ + RNNG+AISTPTS+Q+R DG+ +G A G+ ++RVDG D LA+++AV AR+ +
Sbjct: 218 LFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYSAVHTAREMAIRE 277
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEK 373
+P+LIEA+ YRVGHHSTSDDS+ YRS EI+ W K +PL +F+ ++E G+W +TE
Sbjct: 278 QRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGWWSDKTES 337
Query: 372 AWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHYP 196
+ ++ ++ AEK +KPN + M DVY P L++Q + + + +P+ YP
Sbjct: 338 DLRSRIKKEMLEALRVAEKTEKPNLQNMFSDVYDVPPSNLREQELLVRQTINSHPQDYP 396
>At5g09300.1 68418.m01078 2-oxoisovalerate dehydrogenase, putative /
3-methyl-2-oxobutanoate dehydrogenase, putative /
branched-chain alpha-keto acid dehydrogenase E1 alpha
subunit, putative similar to branched-chain alpha-keto
acid dehydrogenase E1-alpha subunit [Gallus gallus]
GI:12964598; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 472
Score = 180 bits (439), Expect = 7e-46
Identities = 77/179 (43%), Positives = 118/179 (65%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
+ + RNNG+AISTPTS+Q+R DG+ +G A G+ ++RVDG D LA+++AV AR+ +
Sbjct: 289 LFICRNNGWAISTPTSDQFRSDGVVVKGRAYGIRSIRVDGNDALAMYSAVHTAREMAIRE 348
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEK 373
+P+LIEA+ YRVGHHSTSDDS+ YRS EI+ W K +PL +F+ ++E G+W +TE
Sbjct: 349 QRPILIEALTYRVGHHSTSDDSTRYRSAGEIEWWNKARNPLSRFRTWIESNGWWSDKTES 408
Query: 372 AWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHYP 196
+ ++ ++ AEK +KPN + M DVY P L++Q + + + +P+ YP
Sbjct: 409 DLRSRIKKEMLEALRVAEKTEKPNLQNMFSDVYDVPPSNLREQELLVRQTINSHPQDYP 467
>At5g34780.1 68418.m04048 dehydrogenase E1 component family protein
similar to SP|P50136 2-oxoisovalerate dehydrogenase
alpha subunit, mitochondrial precursor (EC 1.2.4.4)
(Branched-chain alpha-keto acid dehydrogenase component
alpha chain) {Mus musculus}; contains Pfam profile
PF00676: Dehydrogenase E1 component
Length = 365
Score = 168 bits (408), Expect = 4e-42
Identities = 78/178 (43%), Positives = 113/178 (63%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
+ + RNNG+AIST SEQ+R DGI +G A G+ ++RVDG D LAV++AV AR+ V
Sbjct: 59 VFICRNNGWAISTHISEQFRSDGIVVKGQAYGIRSIRVDGNDALAVYSAVCSAREMAVTE 118
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEK 373
+PVLIE M YRVGHHSTSDDS+ YR+ +EIQ W + + +F+ +E G+W E E
Sbjct: 119 QRPVLIEMMIYRVGHHSTSDDSTKYRAADEIQYWKMSRNSVNRFRKSVEDNGWWSEEDES 178
Query: 372 AWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHY 199
AR +++ +Q AEK +K E+ DVY P L+++ ++E ++K P+ Y
Sbjct: 179 KLRSNARKQLLQAIQAAEKWEKQPLTELFNDVYDVKPKNLEEEELGLKELIEKQPQDY 236
>At1g24180.1 68414.m03050 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial, putative similar to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}; contains Pfam profile PF00676:
Dehydrogenase E1 component
Length = 393
Score = 70.1 bits (164), Expect = 1e-12
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 1/154 (0%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
I++ NN Y + T T + RG + L+VDG D LAV A K A++ + N
Sbjct: 223 ILVCENNHYGMGTATWRSAKSPAYFKRGDYVP--GLKVDGMDALAVKQACKFAKEHALKN 280
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKF-KLYLEHKGYWDAETE 376
P+++E YR HS SD S YR+ +EI + P+++ KL L H + E
Sbjct: 281 G-PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQVRDPIERVRKLLLTHDIATEKEL- 338
Query: 375 KAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVY 274
K KE R V + +A++ P+ E+ ++Y
Sbjct: 339 KDMEKEIRKEVDDAVAQAKESPIPDASELFTNMY 372
>At1g59900.1 68414.m06748 pyruvate dehydrogenase E1 component alpha
subunit, mitochondrial (PDHE1-A) identical to SP|P52901
Pyruvate dehydrogenase E1 component alpha subunit,
mitochondrial precursor (EC 1.2.4.1) (PDHE1-A)
{Arabidopsis thaliana}
Length = 389
Score = 64.1 bits (149), Expect = 9e-11
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 1/154 (0%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
I++ NN Y + T + RG + L+VDG D AV A K A+ +
Sbjct: 219 ILVCENNHYGMGTAEWRAAKSPSYYKRGDYVP--GLKVDGMDAFAVKQACKFAKQHALEK 276
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKF-KLYLEHKGYWDAETE 376
P+++E YR HS SD S YR+ +EI ++ P+++ KL L H + E
Sbjct: 277 G-PIILEMDTYRYHGHSMSDPGSTYRTRDEISGVRQERDPIERIKKLVLSHDLATEKEL- 334
Query: 375 KAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVY 274
K KE R V + +A+ P E+ +VY
Sbjct: 335 KDMEKEIRKEVDDAIAKAKDCPMPEPSELFTNVY 368
>At1g01090.1 68414.m00011 pyruvate dehydrogenase E1 component alpha
subunit, chloroplast identical to pyruvate dehydrogenase
E1 alpha subunit GB:AAB86803 GI:2454182 from
[Arabidopsis thaliana]; identical to cDNA pyruvate
dehydrogenase E1 alpha subunit mRNA, nuclear gene
encoding plastid protein GI:2454181
Length = 428
Score = 60.5 bits (140), Expect = 1e-09
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 1/154 (0%)
Frame = -1
Query: 732 IMLXRNNGYAISTPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVAN 553
I + NN +AI I +GPA G+ + VDG D L V K A
Sbjct: 250 IFVVENNLWAIGMSHLRATSDPEIWKKGPAFGMPGVHVDGMDVLKVREVAKEAVTRARRG 309
Query: 552 NKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYL-EHKGYWDAETE 376
P L+E YR HS +D + E+ + +D P+ K YL E+K +AE
Sbjct: 310 EGPTLVECETYRFRGHSLADPDELRDAAEKAKYAARD--PIAALKKYLIENKLAKEAEL- 366
Query: 375 KAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVY 274
K+ K+ + V ++ A+ +P ++LE+V+
Sbjct: 367 KSIEKKIDELVEEAVEFADASPQPGRSQLLENVF 400
>At2g33320.1 68415.m04084 C2 domain-containing protein low
similarity to splicing coactivator subunit SRm300 [Homo
sapiens] GI:6649242; contains Pfam profile PF00168: C2
domain
Length = 602
Score = 36.7 bits (81), Expect = 0.016
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Frame = -1
Query: 696 TPTSEQYRGDGIASRGPALGLHTLRVDGTDTLAVHNAVKRARDFTVANNKPV--LIEAMA 523
+P+S+QY+ + SR P L R D T ++ V + + R VAN KP L+ A +
Sbjct: 196 SPSSKQYQS--VVSRPPML--RRTRSD-TSSMVVSDLLSRVERSRVANRKPASALMSAES 250
Query: 522 YRV----GHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLY 412
V GH S + DS +S+E + + P Q + Y
Sbjct: 251 ETVPTTTGHDSVTSDSELTKSIEYALPYQSPKIPSQGYDSY 291
>At5g33393.1 68418.m03983 hypothetical protein
Length = 435
Score = 34.3 bits (75), Expect = 0.085
Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 1/116 (0%)
Frame = -1
Query: 558 ANNKPVLIEAMAYRVGHHSTSDDSSAYRSVEEIQKWTKDESPLQKFKLYLEHKGYW-DAE 382
ANN + +Y GH S + RS +I+ WT D S + F+ + W D E
Sbjct: 11 ANNSKMSFGQGSY--GHSSWGRSCNCGRSTTKIKSWTDDNSGRRFFRCDVHGFVSWSDVE 68
Query: 381 TEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKK 214
+ W K ++ EA + K KE L + + +++ K++EE KK
Sbjct: 69 KQCTWQK-------LSLLEARDELKA-LKESLRTPINQQAIKEEEETKKLEEETKK 116
>At1g53110.1 68414.m06014 expressed protein
Length = 439
Score = 31.5 bits (68), Expect = 0.60
Identities = 21/54 (38%), Positives = 27/54 (50%)
Frame = -1
Query: 468 EEIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKK 307
EE K K E L+K +L +E K K K A V+R +EAEKK+K
Sbjct: 293 EETLKEKKREEQLEKARLAMERK-------RKLHEKAAAKAVIRVKKEAEKKRK 339
>At1g65470.1 68414.m07427 chromatin assembly factor-1 (FASCIATA1)
(FAS1) identical to FAS1 [Arabidopsis thaliana]
GI:4887626
Length = 815
Score = 30.7 bits (66), Expect = 1.0
Identities = 23/90 (25%), Positives = 41/90 (45%)
Frame = -1
Query: 483 AYRSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKP 304
A + + +++ E Q+ + L K D ++ E+R + + E+EK++K
Sbjct: 259 AEKEKKRMERQVLKEKLQQEKEQKLLQKAIVDENNKEKEETESRKRIKKQQDESEKEQKR 318
Query: 303 NWKEMLEDVYYEMPPRLQKQMKQMEEHLKK 214
KE E + ++QKQ ME LKK
Sbjct: 319 REKEQAE---LKKQLQVQKQASIMERFLKK 345
>At3g13220.1 68416.m01654 ABC transporter family protein contains
Pfam profile: PF00005 ABC transporter; similar to white
protein GB:Q27256 [Anopheles gambiae]
Length = 685
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 292 LFPVWFLFLFRFLHGSNHCIPCFLTPGLLSLRVPVT 399
L+P +F+ + F+ N IPCFL L L + +T
Sbjct: 523 LYPTFFMIIVYFMAEFNRNIPCFLFTVLTILLIAIT 558
>At2g24930.1 68415.m02981 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 926
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 402 KGYWDAETEKAWSKEARDTVVRTMQEAEKKKK 307
KGYWD +T + K +D +E +KKK+
Sbjct: 308 KGYWDVKTSEKKKKLLKDKEAEKKKEKKKKKE 339
>At1g32510.1 68414.m04012 no apical meristem (NAM) protein-related
similar to NAM family protein TIGR_Ath1:At1g64105
[Arabidopsis thaliana]
Length = 283
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = -2
Query: 500 RLTIAARTGRWRRYKSGPKMRVLCRSSSFISNIKVTGTRR 381
R+ A ++G W+ +G +++C SSS S+ +TG R+
Sbjct: 79 RINRATKSGYWKA--TGKDRKIVCHSSSSSSSSSITGCRK 116
>At5g49945.1 68418.m06184 expressed protein strong similarity to
unknown protein (pir||T09896)
Length = 480
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/73 (26%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Frame = -1
Query: 426 KFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRL-- 253
+++L + + ++ +KA ++EA + QEA +KKK K+M+E+ +M +
Sbjct: 398 RYRLSSQARNKTESGRQKA-AEEAYKELHNARQEALQKKKAEKKKMMEEAEAKMSAEVIR 456
Query: 252 QKQMKQMEEHLKK 214
+K+ K+ +KK
Sbjct: 457 KKEAKERARQVKK 469
>At4g24330.1 68417.m03492 expressed protein hypothetical protein -
Caenorhabditis elegans,PID:e1350884
Length = 478
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = -1
Query: 426 KFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRL-- 253
++KL + + D +KA ++EA + QEA ++KK K++LE+ ++
Sbjct: 396 RYKLSSQARNKTDGARQKA-AQEAYKELENVRQEALQRKKAEKKKILEEAQAKLSSEALR 454
Query: 252 QKQMKQMEEHLKK 214
+K+ K+ +KK
Sbjct: 455 KKEAKERARQMKK 467
>At2g33420.1 68415.m04096 expressed protein
Length = 1039
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 503 QRLTIAARTGRWRRYKSGPKMRVLCRSSSFISN 405
Q+L + TGRW R +RVLC + ++N
Sbjct: 994 QKLPMPPTTGRWNRSDPNTILRVLCHRNDRVAN 1026
>At5g13990.1 68418.m01636 exocyst subunit EXO70 family protein
contains Pfam domain PF03081: Exo70 exocyst complex
subunit;
Length = 695
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -1
Query: 360 EARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKKYPEHYP 196
E D + T+ ++ K + +E ED Y+++P + K + EE L KY P
Sbjct: 82 EELDQFLPTLSLHMEEHKDSTEEKGEDGYFQIPQFVGKFLDLFEEKLSKYDSGEP 136
>At3g10200.1 68416.m01221 dehydration-responsive protein-related
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 591
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/62 (22%), Positives = 31/62 (50%)
Frame = -1
Query: 393 WDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEHLKK 214
W E ++ K+ + + ++ + E KP+WK L+D ++ + +++ + E L
Sbjct: 342 WIKEEKEVCLKQKAELKLISLCDVEDVLKPSWKVPLKDC-VQISGQTEERPSSLAERLSA 400
Query: 213 YP 208
YP
Sbjct: 401 YP 402
>At1g09900.1 68414.m01114 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 598
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -2
Query: 467 RRYKSGPKMRVLCRSSSFISNIKVTGTRRLRR 372
R YK G K+ V CR+S IS+ G+R+ R
Sbjct: 22 REYKRGNKLDVSCRTSGSISSKIPLGSRKRNR 53
>At1g04470.1 68414.m00438 expressed protein EST gb|ATTS5672 comes from
this gene
Length = 1035
Score = 28.7 bits (61), Expect = 4.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 512 GIIQRLTIAARTGRWRRYKSGPKMRVLCRSSSFISN 405
G Q+L + TGRW R +RVLC ++N
Sbjct: 987 GTGQKLPMPPTTGRWNRSDPNTILRVLCYRDDRVAN 1022
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = -1
Query: 447 KDESPLQKFKLYLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNW-KEMLEDVYY 271
++E+ +++ + +E W ++ E + K+ + M E K+K N KE LEDV
Sbjct: 222 ENEATIKEKQKQIEEMKGWSSKQEISQMKKELEKSHNEMLEGIKEKISNQLKESLEDV-- 279
Query: 270 EMPPRLQKQMKQMEEHLKKYPEHYPLNQHE 181
+L K + EE KK E L+ E
Sbjct: 280 --KEQLAKAQAEREETEKKMNEIQKLSSDE 307
>At5g52860.1 68418.m06561 ABC transporter family protein
Length = 589
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 FLFLFRFLHGSN-HCIPCFLTPGLLSLRVPVTFMFEIKLELLQRTLIFGPLLYLL 468
F F FL S +P F+ + LR + ++ + +L TL+F P L+++
Sbjct: 366 FAFTLTFLLSSTTETLPIFINERPILLRETSSGIYRLSSHILANTLVFLPYLFVI 420
>At3g30640.1 68416.m03878 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 661
Score = 27.9 bits (59), Expect = 7.3
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = -1
Query: 402 KGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEMPPRLQKQMKQMEEH 223
KGYWD +T + K +D + KK+K + E + E + +K+ K+ E
Sbjct: 37 KGYWDVKTSEKKKKLVKDKDADVSETPAKKQKVSHSEGVHS--REKDAQKKKKNKKKEVA 94
Query: 222 LK 217
+K
Sbjct: 95 VK 96
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 27.9 bits (59), Expect = 7.3
Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Frame = -1
Query: 477 RSVEEIQKWTKDESPLQKFKLYLEHKGYWDAETEKA--WSKEARDTVVRTMQEAEKKKKP 304
+ EE + TK+E+ +K K + + D+E K+ +E+RD + +E K+KK
Sbjct: 1013 KEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKE 1072
Query: 303 NWKEMLEDVYYEMPPRLQKQMKQMEEHLKK 214
+ + + K MK+ E+ +K
Sbjct: 1073 SENHKSKKKEDKKEHEDNKSMKKEEDKKEK 1102
>At1g79430.2 68414.m09257 myb family transcription factor-related
Length = 358
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 441 ESPLQKFKLYLE-HKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEM 265
+S LQKF+L + HK Y D T++ A D + R + + N EM +V +
Sbjct: 80 KSHLQKFRLGKQPHKEYGDHSTKEGSRASAMD-IQRNVASSSGMMSRNMNEMQMEVQRRL 138
Query: 264 PPRLQKQ 244
+L+ Q
Sbjct: 139 HEQLEVQ 145
>At1g79430.1 68414.m09256 myb family transcription factor-related
Length = 293
Score = 27.9 bits (59), Expect = 7.3
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = -1
Query: 441 ESPLQKFKLYLE-HKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLEDVYYEM 265
+S LQKF+L + HK Y D T++ A D + R + + N EM +V +
Sbjct: 15 KSHLQKFRLGKQPHKEYGDHSTKEGSRASAMD-IQRNVASSSGMMSRNMNEMQMEVQRRL 73
Query: 264 PPRLQKQ 244
+L+ Q
Sbjct: 74 HEQLEVQ 80
>At5g61280.1 68418.m07690 remorin family protein contains Pfam
domain, PF03763: Remorin, C-terminal region
Length = 263
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = -1
Query: 414 YLEHKGYWDAETEKAWSKEARDTVVRTMQEAEKKKKPNWKEMLE 283
Y ++ Y + E+E A S V+R+M+EA+K+K +E ++
Sbjct: 46 YEKNDYYNEKESELAVSVAVAAFVIRSMEEADKQKSKRIREEIK 89
>At4g25750.1 68417.m03707 ABC transporter family protein Bactrocera
tryoni membrane transporter (white) gene, PID:g3676298
Length = 577
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 307 FLFLFRFLHGSN-HCIPCFLTPGLLSLRVPVTFMFEIKLELLQRTLIFGPLLYLL 468
F F FL S +P F+ + LR + ++ + +L TL+F P L L+
Sbjct: 354 FAFTLTFLLSSTTQTLPIFIDERPILLRETSSGLYRLSSHILANTLVFLPYLLLI 408
>At4g01180.1 68417.m00156 XH/XS domain-containing protein contains
Pfam domain PF03469: XH domain and PF03468: XS domain
Length = 554
Score = 27.5 bits (58), Expect = 9.7
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = -1
Query: 468 EEIQKWTKDESPLQKFKLYLEHKGYWDAETEKAWSKE-ARDTVVRTMQEAEKKKKPNW-K 295
EEIQK K+ + L K + + E ++ E AR R ++ E+ +K +
Sbjct: 215 EEIQKMEKNMQEFYQQVLGGHEKSFAELEAKREKLDERARLIEQRAIKNEEEMEKTRLER 274
Query: 294 EMLEDVYYEMPPRLQKQMKQMEEHLKK 214
EM++ E ++ MK E+H K+
Sbjct: 275 EMIQKAMCEQNEANEEAMKLAEKHQKE 301
>At1g05120.1 68414.m00514 SNF2 domain-containing protein / helicase
domain-containing protein / RING finger
domain-containing protein similar to SP|P79051 DNA
repair protein rhp16 (RAD16 homolog)
{Schizosaccharomyces pombe}; contains Pfam profiles
PF00271: Helicase conserved C-terminal domain, PF00176:
SNF2 family N-terminal domain, PF00097: Zinc finger,
C3HC4 type (RING finger)
Length = 833
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 31 IIYFLNYFCGLSRVETEEYSNSK*NKNTEKT 123
++ L YFCG S V+T + S K K ++ +
Sbjct: 278 LVIHLRYFCGPSAVKTAKQSKQKRKKTSDSS 308
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,545,118
Number of Sequences: 28952
Number of extensions: 284157
Number of successful extensions: 1122
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1121
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1604469728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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