Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f12f
         (421 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0200 - 14179389-14180488,14180575-14180736,14180983-141813...    30   0.87 
01_02_0116 - 11252220-11253313,11253398-11253559,11253977-112543...    30   0.87 
02_05_1091 + 34044999-34045082,34046848-34047048,34047312-340475...    27   4.6  
06_03_0819 - 24977204-24977290,24977372-24977746,24977823-249781...    27   8.1  
01_06_0996 + 33667663-33667900,33668019-33668091,33668785-336688...    27   8.1  
01_06_0995 + 33661367-33661380,33661729-33661826,33662059-336622...    27   8.1  
01_06_0994 + 33653055-33653144,33653219-33653310,33653483-336535...    27   8.1  

>08_02_0200 -
           14179389-14180488,14180575-14180736,14180983-14181383,
           14182078-14182272,14182980-14183094,14183180-14183428,
           14184032-14184093,14184335-14184435,14184701-14184815,
           14185211-14185302,14187619-14187777
          Length = 916

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 221 LKGSGSW*EQYQRXVGTIDSRWV 153
           +KG   W  +YQR  GTID  W+
Sbjct: 701 VKGLDEWPNEYQRQYGTIDLYWI 723


>01_02_0116 -
           11252220-11253313,11253398-11253559,11253977-11254306,
           11254328-11254377,11255195-11255389,11255532-11255625,
           11255713-11255961,11256831-11256892,11257434-11257534,
           11257766-11257880,11258384-11258475,11259197-11259333,
           11259721-11259760
          Length = 906

 Score = 29.9 bits (64), Expect = 0.87
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -3

Query: 221 LKGSGSW*EQYQRXVGTIDSRWV 153
           +KG   W  +YQR  GTID  W+
Sbjct: 693 VKGLDEWPNEYQRQYGTIDLYWI 715


>02_05_1091 +
           34044999-34045082,34046848-34047048,34047312-34047523,
           34047846-34048413
          Length = 354

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -1

Query: 412 WAEVDGMCYSYDAHILVVILLREFGMVNSKXNIRYFXGL 296
           W+++ G  Y  DAH+ +  L   FG  +    I  F G+
Sbjct: 58  WSDIGGRDYMEDAHVCISDLANNFGHNSVDDEIISFYGV 96


>06_03_0819 -
           24977204-24977290,24977372-24977746,24977823-24978199,
           24978456-24978770,24978861-24979296,24979386-24979463
          Length = 555

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 184 RWYCSHQLPLPFNC-YLFPWRILR 252
           +W   H+ P P NC + +P R++R
Sbjct: 263 KWCSYHEFPTPHNCEFHYPERVMR 286


>01_06_0996 +
           33667663-33667900,33668019-33668091,33668785-33668841,
           33668970-33669067,33669482-33669637,33669744-33670366,
           33670484-33670560,33671551-33671805,33671950-33672067,
           33672174-33672345,33672434-33672975
          Length = 802

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 176 GTIDSRWVGILQFGPGW 126
           G + +RW G+ Q G GW
Sbjct: 222 GPVPARWKGVCQVGEGW 238


>01_06_0995 +
           33661367-33661380,33661729-33661826,33662059-33662214,
           33663307-33663926,33664020-33664090,33664176-33664427,
           33664494-33664611,33664715-33664886,33664970-33665511
          Length = 680

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 176 GTIDSRWVGILQFGPGW 126
           G + +RW G+ Q G GW
Sbjct: 104 GPVPARWKGVCQVGEGW 120


>01_06_0994 +
           33653055-33653144,33653219-33653310,33653483-33653580,
           33653758-33653913,33654009-33654628,33654721-33654794,
           33654905-33655156,33655250-33655367,33655468-33655639,
           33655729-33656270
          Length = 737

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 176 GTIDSRWVGILQFGPGW 126
           G + +RW G+ Q G GW
Sbjct: 160 GPVPARWKGVCQVGEGW 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,173,563
Number of Sequences: 37544
Number of extensions: 169393
Number of successful extensions: 312
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 312
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 766563072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)