Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f12f
         (421 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX641029-1|CAE46018.1|  321|Homo sapiens hypothetical protein pr...    32   0.90 
BC106946-1|AAI06947.1|  728|Homo sapiens mannan-binding lectin s...    32   0.90 
BC106945-1|AAI06946.1|  728|Homo sapiens mannan-binding lectin s...    32   0.90 
AF284421-1|AAK84071.1|  728|Homo sapiens complement factor MASP-...    32   0.90 

>BX641029-1|CAE46018.1|  321|Homo sapiens hypothetical protein
           protein.
          Length = 321

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
           V HP+F+ +NY  D+++V++   +  GP++
Sbjct: 133 VLHPDFNIQNYNHDIALVQLQEPVPLGPHV 162


>BC106946-1|AAI06947.1|  728|Homo sapiens mannan-binding lectin
           serine peptidase 1 (C4/C2 activating component of
           Ra-reac protein.
          Length = 728

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
           V HP+F+ +NY  D+++V++   +  GP++
Sbjct: 540 VLHPDFNIQNYNHDIALVQLQEPVPLGPHV 569


>BC106945-1|AAI06946.1|  728|Homo sapiens mannan-binding lectin
           serine peptidase 1 (C4/C2 activating component of
           Ra-reac protein.
          Length = 728

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
           V HP+F+ +NY  D+++V++   +  GP++
Sbjct: 540 VLHPDFNIQNYNHDIALVQLQEPVPLGPHV 569


>AF284421-1|AAK84071.1|  728|Homo sapiens complement factor MASP-3
           protein.
          Length = 728

 Score = 31.9 bits (69), Expect = 0.90
 Identities = 10/30 (33%), Positives = 21/30 (70%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
           V HP+F+ +NY  D+++V++   +  GP++
Sbjct: 540 VLHPDFNIQNYNHDIALVQLQEPVPLGPHV 569


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,798,470
Number of Sequences: 237096
Number of extensions: 922954
Number of successful extensions: 1571
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)