Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f12f
         (421 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p pro...    32   0.27 
AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA...    32   0.27 
Y17920-1|CAA76940.1| 4116|Drosophila melanogaster CALO protein p...    29   1.9  
AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover pro...    29   1.9  
AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-P...    29   1.9  
AY052010-1|AAK93434.1|  372|Drosophila melanogaster LD47230p pro...    29   3.3  
AE013599-3279|AAF46764.2|  372|Drosophila melanogaster CG4386-PA...    29   3.3  
AE013599-761|AAF59008.1|  250|Drosophila melanogaster CG11824-PA...    28   5.8  

>AY071128-1|AAL48750.1|  408|Drosophila melanogaster RE17417p
           protein.
          Length = 408

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
 Frame = +2

Query: 98  GRPXSIXEXPXLVQI-EVFLPILNQWFQQXAGIVLTNYHYLSTATCFHGEFYDXAYXXXX 274
           GRP    E P +  + +  LP +  W     G+++T+ H L+ A C + +  +  +    
Sbjct: 177 GRPAEPDEWPWMAALLQEGLPFV--W---CGGVLITDRHVLTAAHCIYKKNKEDIFVRLG 231

Query: 275 XXXXXXXXXXXXXYVXFA--VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
                            A  V H +++ +NY  D++IVR+  A  F   I
Sbjct: 232 EYNTHMLNETRARDFRIANMVLHIDYNPQNYDNDIAIVRIDRATIFNTYI 281


>AE014296-3182|AAF49135.1|  408|Drosophila melanogaster CG9372-PA
           protein.
          Length = 408

 Score = 32.3 bits (70), Expect = 0.27
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
 Frame = +2

Query: 98  GRPXSIXEXPXLVQI-EVFLPILNQWFQQXAGIVLTNYHYLSTATCFHGEFYDXAYXXXX 274
           GRP    E P +  + +  LP +  W     G+++T+ H L+ A C + +  +  +    
Sbjct: 177 GRPAEPDEWPWMAALLQEGLPFV--W---CGGVLITDRHVLTAAHCIYKKNKEDIFVRLG 231

Query: 275 XXXXXXXXXXXXXYVXFA--VNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
                            A  V H +++ +NY  D++IVR+  A  F   I
Sbjct: 232 EYNTHMLNETRARDFRIANMVLHIDYNPQNYDNDIAIVRIDRATIFNTYI 281


>Y17920-1|CAA76940.1| 4116|Drosophila melanogaster CALO protein
            protein.
          Length = 4116

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 186  LVLFSPTTTTFQLLPVSMENSTXLHTVALSXDLPVAVSPXKYL-MFXLLLTIPNSLRRIT 362
            LVL    +   QLL + +     +   +LS DL +  +  +Y+ +  LLL  PN  R   
Sbjct: 3120 LVLKGVLSQISQLLAIEISKVHRMEEYSLSSDLSLGYALRQYVELLWLLLECPNIRRTYK 3179

Query: 363  TRM 371
            TRM
Sbjct: 3180 TRM 3182


>AF096897-1|AAD20450.1| 5322|Drosophila melanogaster pushover protein.
          Length = 5322

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 186  LVLFSPTTTTFQLLPVSMENSTXLHTVALSXDLPVAVSPXKYL-MFXLLLTIPNSLRRIT 362
            LVL    +   QLL + +     +   +LS DL +  +  +Y+ +  LLL  PN  R   
Sbjct: 4326 LVLKGVLSQISQLLAIEISKVHRMEEYSLSSDLSLGYALRQYVELLWLLLECPNIRRTYK 4385

Query: 363  TRM 371
            TRM
Sbjct: 4386 TRM 4388


>AE014134-1390|AAF52598.1| 5322|Drosophila melanogaster CG14472-PA
            protein.
          Length = 5322

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 186  LVLFSPTTTTFQLLPVSMENSTXLHTVALSXDLPVAVSPXKYL-MFXLLLTIPNSLRRIT 362
            LVL    +   QLL + +     +   +LS DL +  +  +Y+ +  LLL  PN  R   
Sbjct: 4326 LVLKGVLSQISQLLAIEISKVHRMEEYSLSSDLSLGYALRQYVELLWLLLECPNIRRTYK 4385

Query: 363  TRM 371
            TRM
Sbjct: 4386 TRM 4388


>AY052010-1|AAK93434.1|  372|Drosophila melanogaster LD47230p
           protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHF 406
           + HP+++  NY  D++I+++   + F
Sbjct: 202 ITHPKYNARNYDNDIAIIKLDEPVEF 227


>AE013599-3279|AAF46764.2|  372|Drosophila melanogaster CG4386-PA
           protein.
          Length = 372

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 7/26 (26%), Positives = 17/26 (65%)
 Frame = +2

Query: 329 VNHPEFSEENYXKDVSIVRVTHAIHF 406
           + HP+++  NY  D++I+++   + F
Sbjct: 202 ITHPKYNARNYDNDIAIIKLDEPVEF 227


>AE013599-761|AAF59008.1|  250|Drosophila melanogaster CG11824-PA
           protein.
          Length = 250

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 317 VXFAVNHPEFSEENYXKDVSIVRVTHAIHFGPNI 418
           V    +HP+F    +  D++++R    + F PNI
Sbjct: 84  VQIVASHPQFDPRTFEYDLALLRFYEPVIFQPNI 117


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,537,011
Number of Sequences: 53049
Number of extensions: 274072
Number of successful extensions: 498
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)