Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f11f
         (579 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.        23   9.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   9.5  

>DQ974162-1|ABJ52802.1|  418|Anopheles gambiae serpin 3 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 503 TLLFTIINKNVTFFLN 550
           TL+FTI+N+ V F  N
Sbjct: 377 TLVFTILNQPVKFIAN 392


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
 Frame = -1

Query: 378 LHNRWEGHS---HEGCGKGTSVHHPMGNALYECACIHKV 271
           LH+   GH    H   G  TS HH +  A    A   +V
Sbjct: 348 LHHHHPGHHAALHAHLGVPTSQHHQLNQAAVAAAAASQV 386


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,404
Number of Sequences: 2352
Number of extensions: 11057
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55086417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)