Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f07r
         (748 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     25   1.00 
DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              23   3.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   5.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   7.0  
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.3  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    21   9.3  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = -2

Query: 222 YSLNE*KRNKNISTSITNFFIYLKVPWLEYSVQILKLLHCY 100
           Y   E K+N N+  S+T + I+LK   +E +  IL + + Y
Sbjct: 89  YLGKEWKKNLNLRDSVTKYLIHLKE--IEDTEPILLIAYIY 127


>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = -2

Query: 624 LPKLGI-QAIFNRQNSGLTKILDNDEPLYVSKAVQK-AFIE 508
           + K GI + I N  N G   I D +  LY+  A++K +F++
Sbjct: 34  MAKTGINKQIINDVNDGKINIEDENVQLYIECAMKKFSFVD 74


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 254 SKIKKYNRKRVIV*MSKNETKTLAQVLLIFL 162
           +K  K  R++      +  TKTLA VL +FL
Sbjct: 599 NKASKKKREKSSAKKERKATKTLAIVLGVFL 629


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 394 GCDSRTRNSMLPCAFSR 344
           GC+ +T NS   C F++
Sbjct: 434 GCECKTCNSKTKCCFAQ 450


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 465 VVSGGITSAGGQFIRYFVAN 406
           V  GG+     QF+RYFV N
Sbjct: 100 VFLGGVDK-NTQFLRYFVGN 118


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 465 VVSGGITSAGGQFIRYFVAN 406
           V  GG+     QF+RYFV N
Sbjct: 100 VFLGGVDK-NTQFLRYFVGN 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,597
Number of Sequences: 438
Number of extensions: 4125
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)