Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f07f
         (584 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        24   0.82 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.82 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   3.3  
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    22   4.4  
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    22   4.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   4.4  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.8  

>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 18/76 (23%), Positives = 27/76 (35%)
 Frame = -3

Query: 387 TPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDTTFFFL 208
           TP ++   +     +  I S     RLV    C  S  P V   S+     G +     +
Sbjct: 114 TPEVENRIEQYKRENPSIFSWEIRDRLVKEGICDRSTAPSVSAISRLLRGKGGECDEITI 173

Query: 207 SSSLQNFAENLVIAED 160
            + L+    N  I ED
Sbjct: 174 QAILEFSVTNPTIKED 189


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.82
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = -2

Query: 466 DSVLLKFWVELIVTLLDVYFVGYIKRNTF 380
           D V +     +I+T+LD+  +GY+ +  F
Sbjct: 87  DVVFIFCSAPIIITILDIEILGYVNKAKF 115


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  FLVYFYSNTIYTIG 120
           FL+ F++ T++T+G
Sbjct: 167 FLIVFFTETLHTVG 180


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  FLVYFYSNTIYTIG 120
           FL+ F++ T++T+G
Sbjct: 167 FLIVFFTETLHTVG 180


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  FLVYFYSNTIYTIG 120
           FL+ F++ T++T+G
Sbjct: 167 FLIVFFTETLHTVG 180


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 6/14 (42%), Positives = 12/14 (85%)
 Frame = +1

Query: 79  FLVYFYSNTIYTIG 120
           FL+ F++ T++T+G
Sbjct: 167 FLIVFFTETLHTVG 180


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 505 IEVNFFKICIEYLDSVL 455
           I +++FK CI+ +D VL
Sbjct: 133 INMDYFKKCIDPVDKVL 149


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = -2

Query: 505 IEVNFFKICIEYLDSVL 455
           I +++FK CI+ +D VL
Sbjct: 133 INMDYFKKCIDPVDKVL 149


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = -1

Query: 275 FPKLSTPASILLTMAMIQHSSFYPVH 198
           FP +S   S+ +TM     SS YP +
Sbjct: 144 FPSMSVNVSMNMTMHGYHPSSSYPAN 169


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 16/57 (28%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
 Frame = -2

Query: 562 VHLFYFNPFVY*AGG---CGSVIEVNFF-KICIEYLDSVLLKFWVELIVTLLDVYFV 404
           VHL ++ PF+        C       F   +C+ Y     + F V L+  L   YFV
Sbjct: 81  VHLLFYCPFIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFV 137


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,671
Number of Sequences: 336
Number of extensions: 2405
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)