Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f07f
         (584 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    49   3e-06
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    49   3e-06
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    37   0.009
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    37   0.009
Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical pr...    31   0.80 
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr...    30   1.4  
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p...    30   1.4  
Z92972-6|CAB07485.1|  153|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z82285-4|CAD56247.1|  392|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = +2

Query: 176 KFSAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDDDTIRXX 346
           +F+  F N L    +++V SPLS   +L+L+  G    + +++  +L  G  D+  +   
Sbjct: 8   RFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHF 67

Query: 347 XXXXXXXXXXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAG 526
                      KGV   +ANK+Y+K+G + ++P     A++ + AD + ++    AA   
Sbjct: 68  SFVSKEVKNGTKGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE 126

Query: 527 LINKWVEIKQMNALK 571
            IN +V       +K
Sbjct: 127 -INSFVNTATNGKIK 140


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 48.8 bits (111), Expect = 3e-06
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
 Frame = +2

Query: 176 KFSAKFCNELD-KKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSL--GIPDDDTIRXX 346
           +F+  F N L    +++V SPLS   +L+L+  G    + +++  +L  G  D+  +   
Sbjct: 8   RFALNFLNTLPVHNESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVEHF 67

Query: 347 XXXXXXXXXXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAG 526
                      KGV   +ANK+Y+K+G + ++P     A++ + AD + ++    AA   
Sbjct: 68  SFVSKEVKNGTKGVEVYLANKVYLKKG-FTVNPTFLSTALKNYGADAKSLDLTTPAAVQE 126

Query: 527 LINKWVEIKQMNALK 571
            IN +V       +K
Sbjct: 127 -INSFVNTATNGKIK 140


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 31/125 (24%), Positives = 49/125 (39%)
 Frame = +2

Query: 173 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXX 352
           T F+ K    L    +VV SPLS    LALI  G      +EL   LG            
Sbjct: 9   TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG--GSRIFEEFSG 66

Query: 353 XXXXXXXXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLI 532
                     GV   + N++++ +  Y +     +   +++ A  E ++F     AA  +
Sbjct: 67  LMEAVGDTDNGVETKIVNRVFVNQA-YTIHQDYLETVEKLYKASGESLDFSQTEQAAKTM 125

Query: 533 NKWVE 547
           N +VE
Sbjct: 126 NTFVE 130


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 37.1 bits (82), Expect = 0.009
 Identities = 31/125 (24%), Positives = 49/125 (39%)
 Frame = +2

Query: 173 TKFSAKFCNELDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXX 352
           T F+ K    L    +VV SPLS    LALI  G      +EL   LG            
Sbjct: 9   TDFALKLLATLPHSGSVVLSPLSISLGLALIHAGACGSTQKELEDVLG--GSRIFEEFSG 66

Query: 353 XXXXXXXXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLI 532
                     GV   + N++++ +  Y +     +   +++ A  E ++F     AA  +
Sbjct: 67  LMEAVGDTDNGVETKIVNRVFVNQA-YTIHQDYLETVEKLYKASGESLDFSQTEQAAKTM 125

Query: 533 NKWVE 547
           N +VE
Sbjct: 126 NTFVE 130


>Z92828-1|CAB07337.1|  512|Caenorhabditis elegans Hypothetical
           protein C37A5.1 protein.
          Length = 512

 Score = 30.7 bits (66), Expect = 0.80
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = -2

Query: 511 SVIEVNFFKICIEYLDSVLLKFWVELIVTLLDVYFV 404
           SV   NFFK+   +  SV    W EL++ LL  Y V
Sbjct: 11  SVSFFNFFKLLFRWRGSVWKSIWSELVLWLLGYYLV 46


>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = -3

Query: 408 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 229
           ++A    TP I      T E+ +   SSS I   ++SSS  GS    V +    ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435

Query: 228 DTTFFFLSSSLQNFAEN 178
            TT   +SSS     E+
Sbjct: 436 STTPLDVSSSPSESTES 452


>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = -3

Query: 408 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 229
           ++A    TP I      T E+ +   SSS I   ++SSS  GS    V +    ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435

Query: 228 DTTFFFLSSSLQNFAEN 178
            TT   +SSS     E+
Sbjct: 436 STTPLDVSSSPSESTES 452


>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
           protein F53B7.5b protein.
          Length = 2892

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = -3

Query: 408 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 229
           ++A    TP I      T E+ +   SSS I   ++SSS  GS    V +    ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435

Query: 228 DTTFFFLSSSLQNFAEN 178
            TT   +SSS     E+
Sbjct: 436 STTPLDVSSSPSESTES 452


>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
           protein F53B7.5a protein.
          Length = 3095

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 24/77 (31%), Positives = 36/77 (46%)
 Frame = -3

Query: 408 LLATLNVTPFIDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGD 229
           ++A    TP I      T E+ +   SSS I   ++SSS  GS    V +    ++D+ D
Sbjct: 384 MIAVSTTTPMISL----TTESMQSTTSSSEISTTLDSSSTTGS----VSSTESVTSDSSD 435

Query: 228 DTTFFFLSSSLQNFAEN 178
            TT   +SSS     E+
Sbjct: 436 STTPLDVSSSPSESTES 452


>Z92972-6|CAB07485.1|  153|Caenorhabditis elegans Hypothetical
           protein T19C9.6 protein.
          Length = 153

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = +2

Query: 458 DAVEVFDADFEKVNF--DNGAAAAGLINKWVEIK 553
           D V  FD+   K+N   DNG    G + KWV+ K
Sbjct: 103 DEVFFFDSTGGKINLVADNGLVQFGFVVKWVQCK 136


>U80441-1|AAB37651.1|  647|Caenorhabditis elegans Hypothetical
           protein F27C1.6 protein.
          Length = 647

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +2

Query: 428 DYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVEIKQMNALKIS 577
           D   DPK++    E FD   EK     G  AA    K +EI     L+++
Sbjct: 427 DKNYDPKMEAKRAETFDEKVEKAVDSAGVHAAEKRQKEIEIDPSKFLELN 476


>Z82285-4|CAD56247.1|  392|Caenorhabditis elegans Hypothetical
           protein T28F3.4b protein.
          Length = 392

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 472 YLDSVLLKFWVELIVTLLDVYFVGYIK 392
           +L  +L +F +  IVTLL +Y   Y K
Sbjct: 306 FLAQLLCQFVINFIVTLLQIYLPNYFK 332


>Z82285-3|CAD56246.1|  573|Caenorhabditis elegans Hypothetical
           protein T28F3.4a protein.
          Length = 573

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = -2

Query: 472 YLDSVLLKFWVELIVTLLDVYFVGYIK 392
           +L  +L +F +  IVTLL +Y   Y K
Sbjct: 306 FLAQLLCQFVINFIVTLLQIYLPNYFK 332


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,154,278
Number of Sequences: 27780
Number of extensions: 237739
Number of successful extensions: 649
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)