Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f06r
(738 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010652-1|AAH10652.2| 320|Homo sapiens per1-like domain contai... 140 5e-33
AY358437-1|AAQ88803.1| 320|Homo sapiens AGLA546 protein. 140 5e-33
AK075474-1|BAC11642.1| 269|Homo sapiens protein ( Homo sapiens ... 119 1e-26
AB088396-1|BAC55580.1| 319|Homo sapiens CAB2 protein. 110 6e-24
CR533470-1|CAG38501.1| 244|Homo sapiens CLDN12 protein. 36 0.20
BC068532-1|AAH68532.1| 244|Homo sapiens claudin 12 protein. 36 0.20
BC036754-1|AAH36754.1| 244|Homo sapiens claudin 12 protein. 36 0.20
AL136770-1|CAB66704.1| 244|Homo sapiens hypothetical protein pr... 36 0.20
AJ250713-1|CAB60617.1| 244|Homo sapiens claudin-12 protein. 36 0.20
AC006153-2|AAP22363.1| 244|Homo sapiens unknown protein. 36 0.20
BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control ho... 34 0.46
BC014124-1|AAH14124.2| 644|Homo sapiens DIS3L protein protein. 34 0.46
AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein. 34 0.46
BC052243-1|AAH52243.1| 440|Homo sapiens G protein-coupled recep... 31 4.3
AL359708-2|CAI12412.1| 440|Homo sapiens G protein-coupled recep... 31 4.3
U55853-1|AAB58419.1| 696|Homo sapiens 130 kD Golgi-localized ph... 31 5.7
AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator su... 30 7.5
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 30 7.5
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 30 7.5
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 30 7.5
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 30 7.5
BC150195-1|AAI50196.1| 1042|Homo sapiens diacylglycerol lipase, ... 30 10.0
BC150176-1|AAI50177.1| 1042|Homo sapiens diacylglycerol lipase, ... 30 10.0
AY275377-1|AAQ17119.1| 1042|Homo sapiens neural stem cell-derive... 30 10.0
AB014559-1|BAA31634.2| 1049|Homo sapiens KIAA0659 protein protein. 30 10.0
>BC010652-1|AAH10652.2| 320|Homo sapiens per1-like domain
containing 1 protein.
Length = 320
Score = 140 bits (339), Expect = 5e-33
Identities = 83/216 (38%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Frame = -1
Query: 732 QEPASVFASLLNLXANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDT 553
QEPAS AS LN A+ M + RT F S PM FA V +NAW WS VFHTRDT
Sbjct: 103 QEPASAVASFLNGLASLVMLCRYRT-FVPASSPMYHTCVAFAWVSLNAWFWSTVFHTRDT 161
Query: 552 PFTEFMDYTCALSMVM-GLYVAAVVRILHSQKKIVATLLTGSLLYFATHVRLLATGVVDY 376
TE MDY CA ++++ +Y+ V + +V+ LL HV L+ DY
Sbjct: 162 DLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDY 221
Query: 375 DYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCSAVVLPLELLDFPPVRRA 196
YN+ NV G V WL + + R ++ + + L LELLDFPP+
Sbjct: 222 GYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSL-LELLDFPPLFWV 280
Query: 195 WDAHAVWHLSTAPLPLLFYQFVIEDLRY-TQSRQDK 91
DAHA+WH+ST P+ +LF+ F+ +D Y + +DK
Sbjct: 281 LDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEDK 316
>AY358437-1|AAQ88803.1| 320|Homo sapiens AGLA546 protein.
Length = 320
Score = 140 bits (339), Expect = 5e-33
Identities = 83/216 (38%), Positives = 113/216 (52%), Gaps = 2/216 (0%)
Frame = -1
Query: 732 QEPASVFASLLNLXANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDT 553
QEPAS AS LN A+ M + RT F S PM FA V +NAW WS VFHTRDT
Sbjct: 103 QEPASAVASFLNGLASLVMLCRYRT-FVPASSPMYHTCVAFAWVSLNAWFWSTVFHTRDT 161
Query: 552 PFTEFMDYTCALSMVM-GLYVAAVVRILHSQKKIVATLLTGSLLYFATHVRLLATGVVDY 376
TE MDY CA ++++ +Y+ V + +V+ LL HV L+ DY
Sbjct: 162 DLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLLLMLTVHVSYLSLIRFDY 221
Query: 375 DYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCSAVVLPLELLDFPPVRRA 196
YN+ NV G V WL + + R ++ + + L LELLDFPP+
Sbjct: 222 GYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSL-LELLDFPPLFWV 280
Query: 195 WDAHAVWHLSTAPLPLLFYQFVIEDLRY-TQSRQDK 91
DAHA+WH+ST P+ +LF+ F+ +D Y + +DK
Sbjct: 281 LDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEDK 316
>AK075474-1|BAC11642.1| 269|Homo sapiens protein ( Homo sapiens
cDNA PSEC0168 fis, clone PLACE1011146, moderately
similar to CAB2 protein. ).
Length = 269
Score = 119 bits (287), Expect = 1e-26
Identities = 66/173 (38%), Positives = 91/173 (52%), Gaps = 2/173 (1%)
Frame = -1
Query: 603 VCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLL 424
V +NAW W VFHTRDT TE MDY CA ++++ VR + Q V + LL
Sbjct: 94 VSLNAWFWPTVFHTRDTDLTEKMDYFCASTVILHSIYLCCVRTVGLQHPAVVSAFRALLL 153
Query: 423 YFAT-HVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCS 247
T HV L+ DY YN+ NV G V WL + + R R++ +
Sbjct: 154 LMLTVHVSYLSLIRFDYGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKRVVVVLLLQ 213
Query: 246 AVVLPLELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIEDLRY-TQSRQDK 91
+ L LELLDFPP+ DAHA+WH+ST P+ +LF+ F+ +D Y + +DK
Sbjct: 214 GLSL-LELLDFPPLFWVLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEDK 265
>AB088396-1|BAC55580.1| 319|Homo sapiens CAB2 protein.
Length = 319
Score = 110 bits (264), Expect = 6e-24
Identities = 77/217 (35%), Positives = 105/217 (48%), Gaps = 3/217 (1%)
Frame = -1
Query: 732 QEPASVFASLLNLXANAYMYSKLRTEFSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDT 553
QEPAS AS LN A+ M + RT F S PM FA V +NAW WS VFHTRDT
Sbjct: 103 QEPASAVASFLNGLASLVMLCRYRT-FVPASSPMYHTCVAFAWVSLNAWFWSTVFHTRDT 161
Query: 552 PFTEFMDYTCALSMVMGLY-VAAVVRILHSQKKIVATLLTGSLLYFAT-HVRLLATGVVD 379
+T ++ V A ++ ++ LL T HV L+ D
Sbjct: 162 DLQR--KWTTSVPPVSYTQSTCAASGPWGCSTQLWSSAFRALLLLMLTVHVSYLSLIRFD 219
Query: 378 YDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCSAVVLPLELLDFPPVRR 199
Y YN+ NV G V WL + + R ++ + + L LELLDFPP+
Sbjct: 220 YGYNLVANVAIGLVNVVWWLAWCLWNQRRLPHVRKCVVVVLLLQGLSL-LELLDFPPLFW 278
Query: 198 AWDAHAVWHLSTAPLPLLFYQFVIEDLRY-TQSRQDK 91
DAHA+WH+ST P+ +LF+ F+ +D Y + +DK
Sbjct: 279 VLDAHAIWHISTIPVHVLFFSFLEDDSLYLLKESEDK 315
>CR533470-1|CAG38501.1| 244|Homo sapiens CLDN12 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>BC068532-1|AAH68532.1| 244|Homo sapiens claudin 12 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>BC036754-1|AAH36754.1| 244|Homo sapiens claudin 12 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>AL136770-1|CAB66704.1| 244|Homo sapiens hypothetical protein
protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>AJ250713-1|CAB60617.1| 244|Homo sapiens claudin-12 protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>AC006153-2|AAP22363.1| 244|Homo sapiens unknown protein.
Length = 244
Score = 35.5 bits (78), Expect = 0.20
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)
Frame = -1
Query: 441 LTGSLLYFATHVRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRML- 265
L LL+F L+ + YN+ +N F V SF + VY SA G +S +L
Sbjct: 134 LVAGLLFFLAGTVSLSPSIWVIFYNIHLNKKFEPVFSFDYAVYVTIASAGGLFMTSLILF 193
Query: 264 -WFVTCSAVVLPL--ELLDFPP 208
W+ TC ++ P L PP
Sbjct: 194 IWYCTCKSLPSPFWQPLYSHPP 215
>BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like protein.
Length = 971
Score = 34.3 bits (75), Expect = 0.46
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 542 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 655
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 854 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 891
>BC014124-1|AAH14124.2| 644|Homo sapiens DIS3L protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.46
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 542 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 655
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 527 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 564
>AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein.
Length = 947
Score = 34.3 bits (75), Expect = 0.46
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 542 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 655
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 830 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 867
>BC052243-1|AAH52243.1| 440|Homo sapiens G protein-coupled receptor
180 protein.
Length = 440
Score = 31.1 bits (67), Expect = 4.3
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = -1
Query: 654 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRI 475
F + ++ ++LLW F + +++ H + ALS+ GLY V
Sbjct: 293 FIVMTQSVLLLWEQFEDISHHSY---HSHHNLAGILLIVLRICLALSLGCGLYQIITVER 349
Query: 474 LHSQKKIVATLLTGSLLYFATHVRLLATGVVDYDYN----MTVNVIFGAVGSFIWLVYAG 307
+++ T G +L+F H L V+ DY +T+ VI S + ++Y
Sbjct: 350 STLKREFYITFAKGCILWFLCHPVLACISVIFSDYQRDKVITIGVILCQSVSMV-ILYRL 408
Query: 306 YLSARGSRYSSRMLWFV-TCSAVVLPLEL 223
+L S + W V + S+V LPL +
Sbjct: 409 FL-------SHSLYWEVSSLSSVTLPLTI 430
>AL359708-2|CAI12412.1| 440|Homo sapiens G protein-coupled receptor
180 protein.
Length = 440
Score = 31.1 bits (67), Expect = 4.3
Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 5/149 (3%)
Frame = -1
Query: 654 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRI 475
F + ++ ++LLW F + +++ H + ALS+ GLY V
Sbjct: 293 FIVMTQSVLLLWEQFEDISHHSY---HSHHNLAGILLIVLRICLALSLGCGLYQIITVER 349
Query: 474 LHSQKKIVATLLTGSLLYFATHVRLLATGVVDYDYN----MTVNVIFGAVGSFIWLVYAG 307
+++ T G +L+F H L V+ DY +T+ VI S + ++Y
Sbjct: 350 STLKREFYITFAKGCILWFLCHPVLACISVIFSDYQRDKVITIGVILCQSVSMV-ILYRL 408
Query: 306 YLSARGSRYSSRMLWFV-TCSAVVLPLEL 223
+L S + W V + S+V LPL +
Sbjct: 409 FL-------SHSLYWEVSSLSSVTLPLTI 430
>U55853-1|AAB58419.1| 696|Homo sapiens 130 kD Golgi-localized
phosphoprotein protein.
Length = 696
Score = 30.7 bits (66), Expect = 5.7
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +1
Query: 109 RITEIFNHELVEEQGQRRGAEVPHGVRVPRAADRREVQQLQRQHDRGARHE 261
RI + + E+Q + A P G R REVQ++ R +D HE
Sbjct: 243 RIPSLRKPDPAEQQNVTQVAHSPQGYNTAREKPTREVQEVSRNNDVWQNHE 293
>AF201422-1|AAF21439.1| 2296|Homo sapiens splicing coactivator subunit
SRm300 protein.
Length = 2296
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 175 PHGVRVPRAADRREVQQLQRQHDRGARHEPQHARRVAGASRAQVPR 312
P G++ R+ RRE + R+ DR + RR SR++V R
Sbjct: 1767 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR 1812
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 175 PHGVRVPRAADRREVQQLQRQHDRGARHEPQHARRVAGASRAQVPR 312
P G++ R+ RRE + R+ DR + RR SR++V R
Sbjct: 799 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR 844
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 175 PHGVRVPRAADRREVQQLQRQHDRGARHEPQHARRVAGASRAQVPR 312
P G++ R+ RRE + R+ DR + RR SR++V R
Sbjct: 1767 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR 1812
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein
protein.
Length = 1275
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 175 PHGVRVPRAADRREVQQLQRQHDRGARHEPQHARRVAGASRAQVPR 312
P G++ R+ RRE + R+ DR + RR SR++V R
Sbjct: 290 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR 335
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 30.3 bits (65), Expect = 7.5
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +1
Query: 175 PHGVRVPRAADRREVQQLQRQHDRGARHEPQHARRVAGASRAQVPR 312
P G++ R+ RRE + R+ DR + RR SR++V R
Sbjct: 1815 PRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTR 1860
>BC150195-1|AAI50196.1| 1042|Homo sapiens diacylglycerol lipase,
alpha protein.
Length = 1042
Score = 29.9 bits (64), Expect = 10.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 535 GLHVRPVHGHGAVRCCCCE 479
G + VH H A +CCCCE
Sbjct: 603 GRIIHVVHNHPAEQCCCCE 621
>BC150176-1|AAI50177.1| 1042|Homo sapiens diacylglycerol lipase,
alpha protein.
Length = 1042
Score = 29.9 bits (64), Expect = 10.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 535 GLHVRPVHGHGAVRCCCCE 479
G + VH H A +CCCCE
Sbjct: 603 GRIIHVVHNHPAEQCCCCE 621
>AY275377-1|AAQ17119.1| 1042|Homo sapiens neural stem cell-derived
dendrite regulator protein.
Length = 1042
Score = 29.9 bits (64), Expect = 10.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 535 GLHVRPVHGHGAVRCCCCE 479
G + VH H A +CCCCE
Sbjct: 603 GRIIHVVHNHPAEQCCCCE 621
>AB014559-1|BAA31634.2| 1049|Homo sapiens KIAA0659 protein protein.
Length = 1049
Score = 29.9 bits (64), Expect = 10.0
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 535 GLHVRPVHGHGAVRCCCCE 479
G + VH H A +CCCCE
Sbjct: 610 GRIIHVVHNHPAEQCCCCE 628
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,413,378
Number of Sequences: 237096
Number of extensions: 2043212
Number of successful extensions: 8596
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 8338
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8581
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -