Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f06r
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g16560.3 68414.m01985 Per1-like family protein contains Pfam ... 128 4e-30
At1g16560.2 68414.m01984 Per1-like family protein contains Pfam ... 128 4e-30
At1g16560.1 68414.m01983 Per1-like family protein contains Pfam ... 128 4e-30
At5g62130.1 68418.m07798 Per1-like protein-related 91 9e-19
At3g13710.1 68416.m01730 prenylated rab acceptor (PRA1) family p... 35 0.065
At1g01980.1 68414.m00116 FAD-binding domain-containing protein s... 30 1.8
At3g44770.1 68416.m04820 hypothetical protein contains Pfam prof... 29 2.4
At1g35110.1 68414.m04352 Ulp1 protease family protein similar to... 29 4.3
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 28 5.6
At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate mu... 28 7.4
At3g24840.1 68416.m03116 SEC14 cytosolic factor, putative / phos... 28 7.4
At5g19100.1 68418.m02272 extracellular dermal glycoprotein-relat... 27 9.8
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 27 9.8
At2g40380.1 68415.m04979 prenylated rab acceptor (PRA1) family p... 27 9.8
>At1g16560.3 68414.m01985 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 128 bits (309), Expect = 4e-30
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Frame = -1
Query: 738 GMQEPASVFASLLNLXANAY--------MYSKLRTEFSIKSR-PMVLLWHLFALVCMNAW 586
G+QEPASV S+LNL + + +Y KL + + V LWH++ L+ MN+W
Sbjct: 113 GIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSW 172
Query: 585 VWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLLYF-ATH 409
WS VFH+RD TE +DY+ A++++ + A++R + + +++ +L F TH
Sbjct: 173 FWSAVFHSRDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTH 232
Query: 408 VRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVT-CSAVVLP 232
+ + +DY +NM V V G F+W +A A S S+ LW V + +
Sbjct: 233 ILYINFYKLDYGWNMIVCVAMGVSQLFLWARWA----AVSSHPSNWKLWVVVIAGGLAML 288
Query: 231 LELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIEDLRYTQS 103
LE+ DFPP +DAH++WH +T PL +L++ F+ +D + S
Sbjct: 289 LEIYDFPPYEGYFDAHSIWHAATIPLTILWWSFIRDDAEFRTS 331
>At1g16560.2 68414.m01984 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 128 bits (309), Expect = 4e-30
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Frame = -1
Query: 738 GMQEPASVFASLLNLXANAY--------MYSKLRTEFSIKSR-PMVLLWHLFALVCMNAW 586
G+QEPASV S+LNL + + +Y KL + + V LWH++ L+ MN+W
Sbjct: 113 GIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSW 172
Query: 585 VWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLLYF-ATH 409
WS VFH+RD TE +DY+ A++++ + A++R + + +++ +L F TH
Sbjct: 173 FWSAVFHSRDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTH 232
Query: 408 VRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVT-CSAVVLP 232
+ + +DY +NM V V G F+W +A A S S+ LW V + +
Sbjct: 233 ILYINFYKLDYGWNMIVCVAMGVSQLFLWARWA----AVSSHPSNWKLWVVVIAGGLAML 288
Query: 231 LELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIEDLRYTQS 103
LE+ DFPP +DAH++WH +T PL +L++ F+ +D + S
Sbjct: 289 LEIYDFPPYEGYFDAHSIWHAATIPLTILWWSFIRDDAEFRTS 331
>At1g16560.1 68414.m01983 Per1-like family protein contains Pfam
profile PF04080: Per1-like
Length = 342
Score = 128 bits (309), Expect = 4e-30
Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Frame = -1
Query: 738 GMQEPASVFASLLNLXANAY--------MYSKLRTEFSIKSR-PMVLLWHLFALVCMNAW 586
G+QEPASV S+LNL + + +Y KL + + V LWH++ L+ MN+W
Sbjct: 113 GIQEPASVAFSVLNLAMHFHGWLSFFIMIYYKLPLKQDRTAYYEYVGLWHIYGLLSMNSW 172
Query: 585 VWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLLYF-ATH 409
WS VFH+RD TE +DY+ A++++ + A++R + + +++ +L F TH
Sbjct: 173 FWSAVFHSRDVDLTERLDYSSAVAILGFSLILAILRTFDIRVEAARVMVSAPILAFVTTH 232
Query: 408 VRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVT-CSAVVLP 232
+ + +DY +NM V V G F+W +A A S S+ LW V + +
Sbjct: 233 ILYINFYKLDYGWNMIVCVAMGVSQLFLWARWA----AVSSHPSNWKLWVVVIAGGLAML 288
Query: 231 LELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIEDLRYTQS 103
LE+ DFPP +DAH++WH +T PL +L++ F+ +D + S
Sbjct: 289 LEIYDFPPYEGYFDAHSIWHAATIPLTILWWSFIRDDAEFRTS 331
>At5g62130.1 68418.m07798 Per1-like protein-related
Length = 343
Score = 90.6 bits (215), Expect = 9e-19
Identities = 65/216 (30%), Positives = 110/216 (50%), Gaps = 10/216 (4%)
Frame = -1
Query: 738 GMQEPASVFASLLNLXAN-----AY---MYSKLRTEFSIKSRPMVL-LWHLFALVCMNAW 586
G+QEP SV S L+L +Y +Y KL + + K+ + H++A++ MN+
Sbjct: 118 GIQEPVSVAFSALDLAMQFQGWVSYFILVYYKLPLQPNRKTYYEYNGIVHIYAIIVMNSL 177
Query: 585 VWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLTGSLL-YFATH 409
WS + H+RD TE +DY+ A + + A++R Q + V ++T +L ATH
Sbjct: 178 FWSSICHSRDVELTERLDYSSATVLAGFSLILAILRSFSIQDQSVKIMVTAPILAVVATH 237
Query: 408 VRLLATGVVDYDYNMTVNVIFGAVGSFIWLVYAGYLSARGSRYSSRMLWFVTCSAVVLPL 229
+ L +D + V G + +W ++A L++ S++ R F+ S + L L
Sbjct: 238 ILYLNFYNLDEGLHWKVIFGIGGIELVVWGLWAA-LTSHPSKWKLRA--FLISSILTLCL 294
Query: 228 ELLDFPPVRRAWDAHAVWHLSTAPLPLLFYQFVIED 121
+ DFPP + DAHA+W + PL L++ FV +D
Sbjct: 295 RMFDFPPYKGYIDAHALWRGAGIPLSYLWWSFVCDD 330
>At3g13710.1 68416.m01730 prenylated rab acceptor (PRA1) family
protein weak similarity to prenylated Rab acceptor [Mus
musculus] GI:7716652; contains Pfam profile PF03208:
Prenylated rab acceptor (PRA1)
Length = 188
Score = 34.7 bits (76), Expect = 0.065
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
Frame = -1
Query: 627 LLWHLFALVCMNAWV--WSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRIL--HSQK 460
L+WH +L+ V W ++ RD P F ++++GL V +V +L ++
Sbjct: 84 LIWHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATF 143
Query: 459 KIVATLLTGSLL 424
IVA L+ G++L
Sbjct: 144 NIVAALMAGAVL 155
>At1g01980.1 68414.m00116 FAD-binding domain-containing protein
similar to SP|P30986 reticuline oxidase precursor
(Berberine-bridge-forming enzyme) (BBE)
(Tetrahydroprotoberberine synthase) [Eschscholzia
californica]; contains PF01565 FAD binding domain
Length = 541
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 243 VVLPLELLDFPPVRRAWDAHAVWHLSTAPLPLL 145
VVLP F P RA+ +A ++ ST+P PLL
Sbjct: 50 VVLPQSSASFTPTLRAYIRNARFNTSTSPKPLL 82
>At3g44770.1 68416.m04820 hypothetical protein contains Pfam profile
PF04776: Protein of unknown function (DUF626)
Length = 505
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -2
Query: 620 GIYLLLCA*TRGYGLWCSTQGILRSQSSWTTRAPC 516
GI+L++C+ R + L C+ QG LR + TTR C
Sbjct: 36 GIFLMVCSPPRLFLLNCNVQGFLRGIQA-TTRENC 69
>At1g35110.1 68414.m04352 Ulp1 protease family protein similar to
At5g28170, At1g44880, At3g42530, At4g19320, At5g36020,
At4g03970, At3g43010, At2g10350 ; contains Pfam profile
PF02902: Ulp1 protease family, C-terminal catalytic
domain
Length = 1311
Score = 28.7 bits (61), Expect = 4.3
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 3/84 (3%)
Frame = -1
Query: 516 SMVMGLYVAAVVRILHSQKKIVATLLTGSLLYFATHVRL-LATGVVDYDYNMTVNVIFGA 340
S + L V AVV IL ++ +V G +L F R L T V + + V V FG
Sbjct: 38 SWLWTLGVIAVV-ILSARLLVVVVATRGGILAFVLPDRRGLVTVEVRGWWLLAVRVRFGV 96
Query: 339 VGSFIWLVYA--GYLSARGSRYSS 274
+ SF L+Y+ L GSR+ S
Sbjct: 97 LSSFSVLIYSERKLLGLTGSRFLS 120
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = -1
Query: 615 LFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRILHSQKKIVATLLT 436
L A VC+ ++VFHT P +Y ++ + + +R+ H+Q+K+ L
Sbjct: 144 LCARVCITDESENVVFHTYVKPTIPVTNYRYEMTGIRPENLRDAMRLKHAQRKVQEFLCN 203
Query: 435 GSLLY 421
G ++
Sbjct: 204 GEPMW 208
>At3g26780.1 68416.m03350 phosphoglycerate/bisphosphoglycerate
mutase family protein similar to X4 protein GI:21386798,
Y4 protein GI:21386800 from [Silene dioica]; contains
Pfam profiles PF00300: phosphoglycerate mutase family,
PF01535: PPR repeat
Length = 1053
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 253 RHEPQHARRVAGASRAQVPRVHQPD 327
+H P R+ +G SR QV H+PD
Sbjct: 289 KHRPSLTRKKSGKSRLQVMTNHEPD 313
>At3g24840.1 68416.m03116 SEC14 cytosolic factor, putative /
phosphoglyceride transfer protein, putative similar to
phosphatidylinositol transfer-like protein IV
(GI:14486707) [Lotus japonicus]; similar to SEC14
CYTOSOLIC FACTOR (PHOSPHATIDYLINOSITOL/
PHOSPHATIDYLCHOLINE TRANSFER PROTEIN) GB:P46250 from
[Candida albicans] (Yeast (1996) 12(11), 1097-1105);
contains Pfam PF00650 : CRAL/TRIO domain; contains Pfam
PF03765 : CRAL/TRIO, N-terminus
Length = 579
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Frame = +2
Query: 503 PMTMDRAHV*SMNSVNGVSLVWNTI-----DHTHAFMHTRANKCHSNTIGLDLIENSVL 664
P T+++ ++ +N+ NG LVWNT+ T + +H NK S+ L++I+ S L
Sbjct: 253 PETLNQMYI--INAGNGFKLVWNTVKGFLDPKTTSKIHVLGNKYRSHL--LEIIDPSEL 307
>At5g19100.1 68418.m02272 extracellular dermal glycoprotein-related
/ EDGP-related low similarity to extracellular dermal
glycoprotein EDGP precursor [Daucus carota] GI:285741,
SP|P13917 Basic 7S globulin precursor {Glycine max}
Length = 391
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -2
Query: 725 PHRYLHLYSIX*QTHTCIPN*GRSFQSNRDLWCYCGIYLLL 603
P + + +Y + + C+P+ RS N DLW G Y L
Sbjct: 170 PSQLISMYQLPHKIALCLPSTERSQSHNGDLWIGKGEYYYL 210
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 121 IFNHELVEEQGQRRGAEVPHGVRVPRAADRREVQQL 228
+F H + Q RG P RVP AA +++ Q+
Sbjct: 92 LFGHMRCHPERQWRGINPPPNYRVPTAASSKQLNQI 127
>At2g40380.1 68415.m04979 prenylated rab acceptor (PRA1) family
protein contains Pfam profile PF03208: Prenylated rab
acceptor (PRA1)
Length = 213
Score = 27.5 bits (58), Expect = 9.8
Identities = 20/76 (26%), Positives = 35/76 (46%)
Frame = -1
Query: 654 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVAAVVRI 475
FS+ S P LL L + +W++ +F + D P F ++GL + +V +
Sbjct: 92 FSLLSHPFSLL---VLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVV 148
Query: 474 LHSQKKIVATLLTGSL 427
+ V +LLT +L
Sbjct: 149 FMTS---VGSLLTSAL 161
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,118,049
Number of Sequences: 28952
Number of extensions: 275650
Number of successful extensions: 745
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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