Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f06f
         (615 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    26   0.29 
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    26   0.29 
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    26   0.29 
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    26   0.29 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    25   0.38 
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    25   0.51 
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   2.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   3.6  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   3.6  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   3.6  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    22   4.7  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.2  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   8.2  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   8.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 469 VTVAFICSCVHERVGMVYGVPHKGYSVHRVHGLHVRPVHGHGAV 600
           V+V FI       V   +    +G+S H++  L ++PV G  A+
Sbjct: 312 VSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTAL 355


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 469 VTVAFICSCVHERVGMVYGVPHKGYSVHRVHGLHVRPVHGHGAV 600
           V+V FI       V   +    +G+S H++  L ++PV G  A+
Sbjct: 312 VSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTAL 355


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 469 VTVAFICSCVHERVGMVYGVPHKGYSVHRVHGLHVRPVHGHGAV 600
           V+V FI       V   +    +G+S H++  L ++PV G  A+
Sbjct: 312 VSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTAL 355


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 25.8 bits (54), Expect = 0.29
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +1

Query: 469 VTVAFICSCVHERVGMVYGVPHKGYSVHRVHGLHVRPVHGHGAV 600
           V+V FI       V   +    +G+S H++  L ++PV G  A+
Sbjct: 312 VSVLFILLVKEGEVAFFFTQFSEGFSTHQIQVLEIKPVLGGTAL 355


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = +3

Query: 132 YIKIVSNDAYRGIVMKMAFCS 194
           Y KIVS D Y+GI++   FCS
Sbjct: 241 YTKIVS-DTYQGILVVQFFCS 260


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 529 PHKGYSVHRVHGLHVRPVHGH 591
           PH  +++H  H  HV P   H
Sbjct: 43  PHLNHAMHPYHANHVNPTANH 63


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 11/41 (26%), Positives = 17/41 (41%)
 Frame = -3

Query: 370 LLHTHNPFEWPLAMKLDYLPTSIL*FLYSRPHAMILALVYA 248
           L HT+  F W   M + Y     + F       ++  L+YA
Sbjct: 123 LFHTYEAFVWTRIMGVAYYEQYAVEFFQFYAQFIVYFLIYA 163


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 250 ASPTEEPTPEIL 215
           A+P EEP PE+L
Sbjct: 32  ANPDEEPDPELL 43


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 250 ASPTEEPTPEIL 215
           A+P EEP PE+L
Sbjct: 32  ANPDEEPDPELL 43


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 183 PFSSQFLDMHRLRQSLYMYKRSPS 112
           PF+  FLD      S+Y  + SP+
Sbjct: 198 PFAKAFLDAKERPDSIYQREYSPT 221


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +2

Query: 263 KYHCMWSAVKKLENAGRQVVKFHGKWPF 346
           +Y C++S    L +     +K H K PF
Sbjct: 279 EYRCIFSLRPGLTHKYTHEIKLHDKTPF 306


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +3

Query: 90  N*VSYRRAKAIACTYIKIVSNDAYRGI 170
           N  SY RAK +    I  ++ D +RG+
Sbjct: 389 NKASYARAKGLGGIAIVDITLDDFRGL 415


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +2

Query: 149 KRCISRNCDENGLLF 193
           K  +++ C+E G+LF
Sbjct: 757 KDLVAKRCEERGILF 771


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 268 ILALVYASPTEEPTPEILLYCCILSE 191
           I++LVY +P  +   +I L   ILS+
Sbjct: 117 IISLVYQAPVYKELTDIKLVLNILSD 142


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -3

Query: 268 ILALVYASPTEEPTPEILLYCCILSE 191
           I++LVY +P  +   +I L   ILS+
Sbjct: 43  IISLVYQAPVYKELTDIKLVLNILSD 68


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,061
Number of Sequences: 336
Number of extensions: 3779
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15666150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)