Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f06f
(615 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC823.07 |||GPI-phospholipase A2 activity regulator |Schizosac... 113 2e-26
SPAC1834.07 |klp3|krp1|kinesin-like protein Klp3|Schizosaccharom... 29 0.40
SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyce... 29 0.71
SPBC646.09c |int6|yin6|translation initiation factor eIF3e|Schiz... 29 0.71
SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces po... 28 0.93
SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces pombe... 27 2.2
SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|... 26 3.8
SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomy... 26 3.8
SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p... 26 3.8
SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element Wtf21|Sc... 26 3.8
SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|... 26 3.8
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ... 26 5.0
SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces pomb... 25 8.7
>SPAC823.07 |||GPI-phospholipase A2 activity regulator
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 331
Score = 113 bits (272), Expect = 2e-26
Identities = 70/186 (37%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Frame = +2
Query: 68 TVFILSCKLS---QLSASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLF 238
T+F L LS Q+SAS GD +Y C+ RCI C N + T + +LF
Sbjct: 8 TIFFLFTALSLFRQISASAGDLHPVYVSCVNRCIENKCHGN-----PSDTSKLPLDLKLF 62
Query: 239 SWRCIDECKYHCMWSAVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAY 418
W C C Y C +A ++HGKW F R+ G+QE SVF S+LN + +
Sbjct: 63 RWDCGSNCGYECEITAENYFAAHNLPSQQYHGKWYFIRVFGIQELFSVFFSMLNFMIHYN 122
Query: 419 MYSKLRTEFSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVM-G 595
Y +R P L +A+V MNAWVWS VFH RDTP TE +DY A + V+ G
Sbjct: 123 GYHIMRRCIP-DEHPAKRLCLSWAIVGMNAWVWSSVFHIRDTPITEKLDYFSAGAFVLFG 181
Query: 596 LYVAAV 613
Y +
Sbjct: 182 SYCTLI 187
>SPAC1834.07 |klp3|krp1|kinesin-like protein
Klp3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 554
Score = 29.5 bits (63), Expect = 0.40
Identities = 14/23 (60%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 95 SQLSASEGDR-LYIYKDCLKRCI 160
S+LS E R LYIYKD L RC+
Sbjct: 333 SELSVDEMKRQLYIYKDALSRCV 355
>SPAC30D11.11 |||Haemolysin-III family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 28.7 bits (61), Expect = 0.71
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 546 GVSLVWNTIDHTHAFMHTRANKCHSNTIGLD-LIENSVLNLEYMYAF 409
G S++W+T + H R C + +G+ LI S++++EY +AF
Sbjct: 258 GCSVIWHTFSSLSNYKHMRCAAC-MDYVGISALIAASIISVEY-HAF 302
>SPBC646.09c |int6|yin6|translation initiation factor
eIF3e|Schizosaccharomyces pombe|chr 2|||Manual
Length = 501
Score = 28.7 bits (61), Expect = 0.71
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = -3
Query: 250 ASPTEEPTPEILLYCCILSEQKAIFITIPRYASFETIFIYVQAIAFARR*LTQ 92
A+ EEP PE+ + ++I I P Y++F+ I ++++F + L Q
Sbjct: 435 ATEAEEPEPEVQFGFKAKLDGESIIIEHPTYSAFQQIIDRTKSLSFESQNLEQ 487
>SPBC543.05c |||inorganic anion exchanger |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 517
Score = 28.3 bits (60), Expect = 0.93
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +2
Query: 449 IKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVMGLYVA 607
+ S+P+ ++ + N V+ + H R TP+ F+ + C SM+ +A
Sbjct: 88 LSSQPLCIVGVTGPITVFNYTVYD-IMHDRGTPYFPFLCWICLWSMIFHFIIA 139
>SPAC11H11.02c |mug162||sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 264
Score = 27.1 bits (57), Expect = 2.2
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = +2
Query: 395 LNLLANAYMYSKLRTEFSIKSRPMV-LLWHLFALVCMNAWVWSMVFHTRD 541
L+ + N ++ K +E+ + V L +HLFAL +N ++W + ++D
Sbjct: 150 LHFILNVLLFLKF-SEYMLPLLGRVHLSYHLFALWVINLYIWIKLIDSKD 198
>SPCC1906.03 |wtf19||wtf element Wtf19|Schizosaccharomyces pombe|chr
3|||Manual
Length = 393
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 443 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDY-TCALSMVMGLYVAAV 613
F+I+ M+++W L+ ++C + + D + + Y TC +S V+ L V++V
Sbjct: 228 FNIRREMMIIIWLLWLIICC---ILFGCVKSGDLNLNKALIYSTCTISAVLLLIVSSV 282
>SPAC23G3.02c |sib1||ferrichrome synthetase Sib1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 4924
Score = 26.2 bits (55), Expect = 3.8
Identities = 11/48 (22%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -1
Query: 240 LKSLHQKSC-CIVVFCLNKRPFSSQFLDMHRLRQSLYMYKRSPSLADN 100
+ + + K+C C + N + + +H+L +++ +R PS AD+
Sbjct: 70 IPNTNPKNCQCYLYHSTNSQLEPLEVFHLHKLHSAVFTSRRDPSFADD 117
>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 555
Score = 26.2 bits (55), Expect = 3.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +2
Query: 353 IMGMQEPASVFASLLNLLANAYMYSKLR 436
I+GM++ S FA N ++N+Y YS R
Sbjct: 30 ILGMRDFQSRFADRYNPISNSYSYSAWR 57
>SPCC1739.15 |wtf21|SPCC1739.15, SPCC1739.15|wtf element
Wtf21|Schizosaccharomyces pombe|chr 3|||Manual
Length = 329
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +2
Query: 443 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTE-FMDYTCALSMVMGLYVAAV 613
F+I+ M+++W L+ ++C +V+ + D + + TC +S V+ L V++V
Sbjct: 157 FNIRREMMIIIWILWLIICCILFVY---IKSGDLILNKALICSTCTISAVLLLIVSSV 211
>SPCC1620.02 |wtf23||wtf element Wtf23|Schizosaccharomyces pombe|chr
3|||Manual
Length = 368
Score = 26.2 bits (55), Expect = 3.8
Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 443 FSIKSRPMVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDY-TCALSMVMGLYVAAV 613
F+I+ M+++W L+ ++C + + D + + Y TC +S V+ L V++V
Sbjct: 195 FNIRREMMIIIWLLWLIICC---ILFGCVKSGDLNLNKALIYSTCTISAVLLLIVSSV 249
>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 557
Score = 25.8 bits (54), Expect = 5.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 353 IMGMQEPASVFASLLNLLANAYMYSKLR 436
I+GM++ S FA N + N+Y YS R
Sbjct: 30 ILGMRDFQSRFADRYNPITNSYSYSAWR 57
>SPAC22G7.02 |kap111||karyopherin Kap111|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 990
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +2
Query: 77 ILSCKLSQLSASEGDRLYIYKDCLKRCI 160
+L+C L+QL S L I+++ LK C+
Sbjct: 638 LLNCILAQLQPSLYPNLEIFENVLKSCL 665
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,718,004
Number of Sequences: 5004
Number of extensions: 60227
Number of successful extensions: 184
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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