Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f06f
(615 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 31 0.56
SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0) 31 0.74
SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 31 0.74
SB_52157| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36) 31 0.74
SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 31 0.74
SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 31 0.74
SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21) 31 0.74
SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 31 0.74
SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18) 31 0.74
SB_32810| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15) 30 1.7
SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021) 29 3.0
SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7) 29 4.0
SB_36032| Best HMM Match : DnaJ_CXXCXGXG (HMM E-Value=1.9) 28 5.2
SB_28995| Best HMM Match : LicD (HMM E-Value=0.018) 28 5.2
SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5) 24 5.5
SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24) 27 9.1
SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_46870| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 998
Score = 31.5 bits (68), Expect = 0.56
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAVRSSESYGAPQIPINAALPCNSTS 192
>SB_52374| Best HMM Match : GATase_2 (HMM E-Value=0)
Length = 1075
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 48 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 100
>SB_39683| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 579
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 104 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 156
>SB_52157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 514
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 192
>SB_40058| Best HMM Match : rve (HMM E-Value=5.2e-36)
Length = 1048
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 192
>SB_38523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 324 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 376
>SB_27417| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 538
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 261 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 313
>SB_22197| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 528
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 192
>SB_16302| Best HMM Match : RVT_1 (HMM E-Value=1.6e-21)
Length = 870
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 192
>SB_15963| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 434
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 125 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 177
>SB_14793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 821
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 424 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 476
>SB_421| Best HMM Match : RVT_1 (HMM E-Value=2.4e-18)
Length = 1046
Score = 31.1 bits (67), Expect = 0.74
Identities = 19/53 (35%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP N T+
Sbjct: 485 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCNSTS 537
>SB_32810| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 238
Score = 30.7 bits (66), Expect = 0.98
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 145 SQTMHIEEL**KWPFVQTEYNNTTGFLV*ALQLAMHR-RVQVSLHVVCCKEIRECWSASS 321
+QT H+EEL KWPF Q+++ + L+L + QV+ V C + W + S
Sbjct: 160 TQTQHLEELQQKWPFRQSDHQEVDK-VSKTLELTLSTLSQQVAGFVHCYESEMRPWCSRS 218
Query: 322 Q 324
Q
Sbjct: 219 Q 219
>SB_53795| Best HMM Match : rve (HMM E-Value=5.9e-15)
Length = 615
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I N LP N T+
Sbjct: 45 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPTNAALPCNSTS 97
>SB_24279| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1095
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I N LP N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPTNAALPCNSTS 192
>SB_15389| Best HMM Match : zf-CCHC (HMM E-Value=0.00021)
Length = 462
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N LP + T+
Sbjct: 260 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQIPINAALPCSSTS 312
>SB_29735| Best HMM Match : Kunitz_BPTI (HMM E-Value=2.7)
Length = 211
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1
Query: 144 QSLYMYKRSPSLADN 100
+SL++YKR PSLADN
Sbjct: 139 ESLHVYKRQPSLADN 153
>SB_36032| Best HMM Match : DnaJ_CXXCXGXG (HMM E-Value=1.9)
Length = 108
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Frame = +1
Query: 463 YGVTVAFICSCVHERVGMVYGVPHK------GYSVHRVHGLHVRPVHGHGAVRCCCC 615
+GVTV + C V +GV G +V R HG+ V HG RC C
Sbjct: 27 HGVTVFTVSRCHGVTVSRCHGVTVSRCSRCHGVTVSRCHGVTVSRCHGVTVSRCSRC 83
>SB_28995| Best HMM Match : LicD (HMM E-Value=0.018)
Length = 1164
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/46 (30%), Positives = 19/46 (41%), Gaps = 4/46 (8%)
Frame = +2
Query: 206 TIQQDFWCRLFSWRCID----ECKYHCMWSAVKKLENAGRQVVKFH 331
TIQ WC+ F+W C+ K HC + R V+ H
Sbjct: 341 TIQPFKWCKYFAWFCVSCLQKSAKPHCFRLQAVERSTQRRIVLSLH 386
>SB_56405| Best HMM Match : Fels1 (HMM E-Value=6.5)
Length = 119
Score = 23.8 bits (49), Expect(2) = 5.5
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 80 LSCKLSQLSASEGDRLYIYKDCLKRCI 160
LSC+L SA+ G+R + Y L CI
Sbjct: 19 LSCQLHNESATRGERRFAYW-ALAECI 44
Score = 23.0 bits (47), Expect(2) = 5.5
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +2
Query: 146 LKRCISRNCDENGL-LFRQNTTIQQDFWCRLFSW 244
L RC+SR CD + L R T + F C W
Sbjct: 67 LHRCVSRICDTGYIPLPRSLTRYARSFDCGERKW 100
>SB_54138| Best HMM Match : rve (HMM E-Value=6.8e-24)
Length = 2160
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 474 SNTIGLDLIENSVLNLEYMYAFANKLSRDANTDAGSCIPIIRLNGHLP*NLTT 316
SNTI L+EN L+L+ M+ A L + P I +N L N T+
Sbjct: 140 SNTIRQRLLENKTLDLKTMFDQARALESAMRSSESYGAPQILINAALRCNSTS 192
>SB_12581| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 756
Score = 27.5 bits (58), Expect = 9.1
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 6/98 (6%)
Frame = +1
Query: 325 VSWQV-AIQTDYGYARARIGICISTQFVSKRIHVFQIKDGVFN-QIETYGVTVAFICSCV 498
+SW++ + + Y + R +C++ K I + Q K N Q E +C
Sbjct: 413 ISWKILSSHSTYNSSSKRCNLCLN----KKLIIIRQPKLSNLNKQYEKLNGDHP-VCFEA 467
Query: 499 HERVGMVYGVPHKGYSVHRVHGLH----VRPVHGHGAV 600
ERV VPH+GY +H + ++ V HGHG +
Sbjct: 468 KERVYASVRVPHEGY-IHSIKLVYRSGKVTCAHGHGQI 504
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,741,761
Number of Sequences: 59808
Number of extensions: 479731
Number of successful extensions: 1724
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1723
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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