Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f06f
(615 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010652-1|AAH10652.2| 320|Homo sapiens per1-like domain contai... 151 1e-36
AY358437-1|AAQ88803.1| 320|Homo sapiens AGLA546 protein. 151 1e-36
AB088396-1|BAC55580.1| 319|Homo sapiens CAB2 protein. 134 2e-31
AK075474-1|BAC11642.1| 269|Homo sapiens protein ( Homo sapiens ... 68 3e-11
BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control ho... 34 0.35
BC014124-1|AAH14124.2| 644|Homo sapiens DIS3L protein protein. 34 0.35
AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein. 34 0.35
BC028694-1|AAH28694.1| 1098|Homo sapiens tudor domain containing... 31 3.2
AL512590-4|CAH71605.1| 1098|Homo sapiens tudor domain containing... 31 3.2
AL449464-1|CAI14933.1| 1098|Homo sapiens tudor domain containing... 31 3.2
BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase... 31 4.3
AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein. 31 4.3
>BC010652-1|AAH10652.2| 320|Homo sapiens per1-like domain
containing 1 protein.
Length = 320
Score = 151 bits (367), Expect = 1e-36
Identities = 76/171 (44%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Frame = +2
Query: 104 SASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLFSWRCIDECKYHCMWS 283
S S+GDR +Y+DC+ +C +NC L + +Q + L W C D+CKY CMW
Sbjct: 19 SGSQGDREPVYRDCVLQCEEQNCSGGAL---NHFRSRQPIYMSLAGWTCRDDCKYECMWV 75
Query: 284 AVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAYMYSKLRTEFSIKSRP 463
V G +V +FHGKWPF R + QEPAS AS LN LA+ M + RT F S P
Sbjct: 76 TVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLNGLASLVMLCRYRT-FVPASSP 134
Query: 464 MVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVM-GLYVAAV 613
M FA V +NAW WS VFHTRDT TE MDY CA ++++ +Y+ V
Sbjct: 135 MYHTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCV 185
>AY358437-1|AAQ88803.1| 320|Homo sapiens AGLA546 protein.
Length = 320
Score = 151 bits (367), Expect = 1e-36
Identities = 76/171 (44%), Positives = 98/171 (57%), Gaps = 1/171 (0%)
Frame = +2
Query: 104 SASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLFSWRCIDECKYHCMWS 283
S S+GDR +Y+DC+ +C +NC L + +Q + L W C D+CKY CMW
Sbjct: 19 SGSQGDREPVYRDCVLQCEEQNCSGGAL---NHFRSRQPIYMSLAGWTCRDDCKYECMWV 75
Query: 284 AVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAYMYSKLRTEFSIKSRP 463
V G +V +FHGKWPF R + QEPAS AS LN LA+ M + RT F S P
Sbjct: 76 TVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLNGLASLVMLCRYRT-FVPASSP 134
Query: 464 MVLLWHLFALVCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVM-GLYVAAV 613
M FA V +NAW WS VFHTRDT TE MDY CA ++++ +Y+ V
Sbjct: 135 MYHTCVAFAWVSLNAWFWSTVFHTRDTDLTEKMDYFCASTVILHSIYLCCV 185
>AB088396-1|BAC55580.1| 319|Homo sapiens CAB2 protein.
Length = 319
Score = 134 bits (324), Expect = 2e-31
Identities = 67/147 (45%), Positives = 83/147 (56%)
Frame = +2
Query: 104 SASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLFSWRCIDECKYHCMWS 283
S S+GDR +Y+DC+ +C +NC L + +Q + L W C D+CKY CMW
Sbjct: 19 SGSQGDREPVYRDCVLQCEEQNCSGGAL---NHFRSRQPIYMSLAGWTCRDDCKYECMWV 75
Query: 284 AVKKLENAGRQVVKFHGKWPFKRIMGMQEPASVFASLLNLLANAYMYSKLRTEFSIKSRP 463
V G +V +FHGKWPF R + QEPAS AS LN LA+ M + RT F S P
Sbjct: 76 TVGLYLQEGHKVPQFHGKWPFSRFLFFQEPASAVASFLNGLASLVMLCRYRT-FVPASSP 134
Query: 464 MVLLWHLFALVCMNAWVWSMVFHTRDT 544
M FA V +NAW WS VFHTRDT
Sbjct: 135 MYHTCVAFAWVSLNAWFWSTVFHTRDT 161
>AK075474-1|BAC11642.1| 269|Homo sapiens protein ( Homo sapiens
cDNA PSEC0168 fis, clone PLACE1011146, moderately
similar to CAB2 protein. ).
Length = 269
Score = 67.7 bits (158), Expect = 3e-11
Identities = 30/78 (38%), Positives = 42/78 (53%)
Frame = +2
Query: 104 SASEGDRLYIYKDCLKRCISRNCDENGLLFRQNTTIQQDFWCRLFSWRCIDECKYHCMWS 283
S S+GDR +Y+DC+ +C +NC L + +Q + L W C D+CKY CMW
Sbjct: 19 SGSQGDREPVYRDCVLQCEEQNCSGGAL---NHFRSRQPIYMSLAGWTCRDDCKYECMWV 75
Query: 284 AVKKLENAGRQVVKFHGK 337
V G +V +FHGK
Sbjct: 76 TVGLYLQEGHKVPQFHGK 93
Score = 50.8 bits (116), Expect = 4e-06
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +2
Query: 494 VCMNAWVWSMVFHTRDTPFTEFMDYTCALSMVM-GLYVAAV 613
V +NAW W VFHTRDT TE MDY CA ++++ +Y+ V
Sbjct: 94 VSLNAWFWPTVFHTRDTDLTEKMDYFCASTVILHSIYLCCV 134
>BC022089-1|AAH22089.1| 971|Homo sapiens DIS3 mitotic control
homolog (S. cerevisiae)-like protein.
Length = 971
Score = 34.3 bits (75), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -1
Query: 555 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 442
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 854 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 891
>BC014124-1|AAH14124.2| 644|Homo sapiens DIS3L protein protein.
Length = 644
Score = 34.3 bits (75), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -1
Query: 555 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 442
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 527 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 564
>AB075835-1|BAB85541.1| 947|Homo sapiens KIAA1955 protein protein.
Length = 947
Score = 34.3 bits (75), Expect = 0.35
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = -1
Query: 555 SVNGVSLVWNTIDHTHAFMHTRANKCHSNTIGLDLIEN 442
+ +G S+ ++ DH + +A++CHS+TI L++I N
Sbjct: 830 TTDGESVTFHLFDHVTVRISIQASRCHSDTIRLEIISN 867
>BC028694-1|AAH28694.1| 1098|Homo sapiens tudor domain containing 7
protein.
Length = 1098
Score = 31.1 bits (67), Expect = 3.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 342 HSNGLWVCKSPHRYLHLY 395
H+NG+W+ K PH Y LY
Sbjct: 248 HNNGIWISKLPHFYKELY 265
>AL512590-4|CAH71605.1| 1098|Homo sapiens tudor domain containing 7
protein.
Length = 1098
Score = 31.1 bits (67), Expect = 3.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 342 HSNGLWVCKSPHRYLHLY 395
H+NG+W+ K PH Y LY
Sbjct: 248 HNNGIWISKLPHFYKELY 265
>AL449464-1|CAI14933.1| 1098|Homo sapiens tudor domain containing 7
protein.
Length = 1098
Score = 31.1 bits (67), Expect = 3.2
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 342 HSNGLWVCKSPHRYLHLY 395
H+NG+W+ K PH Y LY
Sbjct: 248 HNNGIWISKLPHFYKELY 265
>BC110451-1|AAI10452.1| 1042|Homo sapiens corin, serine peptidase
protein.
Length = 1042
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 83 SCKLSQLSASEGDRLYIYKDCLKRC-ISRNCDENGLL 190
+C + Q S EGD+ +Y CL C S CD N L
Sbjct: 413 NCSVIQTSCQEGDQRCLYNPCLDSCGGSSLCDPNNSL 449
>AF133845-1|AAD31850.1| 1042|Homo sapiens corin protein.
Length = 1042
Score = 30.7 bits (66), Expect = 4.3
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +2
Query: 83 SCKLSQLSASEGDRLYIYKDCLKRC-ISRNCDENGLL 190
+C + Q S EGD+ +Y CL C S CD N L
Sbjct: 413 NCSVIQTSCQEGDQRCLYNPCLDSCGGSSLCDPNNSL 449
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,724,994
Number of Sequences: 237096
Number of extensions: 2148720
Number of successful extensions: 8866
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 8518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8859
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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