Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f06f
         (615 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   1.8  
X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.       23   3.1  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   4.1  
DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex det...    22   4.1  
DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex det...    22   4.1  
AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex det...    22   4.1  
AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex det...    22   4.1  
DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex det...    22   5.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   5.5  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   7.2  
AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex det...    21   7.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   7.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   7.2  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.2  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.6  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 529 PHKGYSVHRVHGLH 570
           PH+G S H  HG H
Sbjct: 328 PHRGSSPHHQHGNH 341


>X02007-1|CAA26038.1|   70|Apis mellifera prepromelittin protein.
          Length = 70

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -3

Query: 265 LALVYASPTEEPTPE 221
           ++ +YA+P  EP PE
Sbjct: 16  ISYIYAAPEPEPAPE 30


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325075-1|ABD14089.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325074-1|ABD14088.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325073-1|ABD14087.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325072-1|ABD14086.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325071-1|ABD14085.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325070-1|ABD14084.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325069-1|ABD14083.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>DQ325068-1|ABD14082.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNSLSNNYNYN 95


>AY569696-1|AAS86649.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 313 KIISNNNSLSNNYNYN 328


>AY569695-1|AAS86648.1|  414|Apis mellifera complementary sex
           determiner protein.
          Length = 414

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 313 KIISNNNSLSNNYNYN 328


>DQ325133-1|ABD14147.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 25  RIDSNNGILKNNFSYS 72
           +I SNN  L NN++Y+
Sbjct: 80  KIISNNNPLSNNYNYN 95


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -1

Query: 444 NSVLNLEYMYAFANKLSRDANTD 376
           N +   EYM A +N++ +  N D
Sbjct: 371 NRIHKNEYMLALSNRMQKIVNND 393


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 435 LNLEYMYAFANKLSRDANTD 376
           +N EY+   +NK+ +  N D
Sbjct: 373 INREYILVLSNKMQKMVNND 392


>AY569720-1|AAS86673.1|  406|Apis mellifera complementary sex
           determiner protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +1

Query: 34  SNNGILKNNFSYSIYFKL 87
           SNN I  NN++  +Y+ +
Sbjct: 319 SNNTIHNNNYNKKLYYNI 336


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 435 LNLEYMYAFANKLSRDANTD 376
           +N EY+   +NK+ +  N D
Sbjct: 373 INREYILVLSNKMQKMVNND 392


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -1

Query: 435 LNLEYMYAFANKLSRDANTD 376
           +N EY+   +NK+ +  N D
Sbjct: 373 INREYILVLSNKMQKMVNND 392


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
 Frame = +1

Query: 496  VHERVGMVYGVPHK--GYSVHRVHGLHVR 576
            VH R G  YGVPH    Y V   H +  R
Sbjct: 1062 VH-RAGSYYGVPHSTLEYKVKERHLMRPR 1089


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 83  SCKLSQLSASEGDRLYIYK 139
           +CK  + +A  G R  IYK
Sbjct: 579 TCKKDKKNAGSGSRFTIYK 597


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,213
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)