Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f05f
(562 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174; Eukary... 279 2e-74
UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4... 202 3e-51
UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3; ... 194 2e-48
UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1; Tr... 167 2e-40
UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3; Olig... 161 8e-39
UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole geno... 158 7e-38
UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genom... 133 3e-30
UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1; Encephal... 126 4e-28
UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5; Euryarc... 116 3e-25
UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lambl... 106 4e-22
UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4; Archaea... 103 2e-21
UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8; Euryarc... 101 1e-20
UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1; Methano... 100 5e-20
UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5; Halobac... 98 1e-19
UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3; Methano... 97 3e-19
UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1; ... 96 4e-19
UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S riboso... 94 2e-18
UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5; Methano... 90 4e-17
UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2; Thermof... 88 2e-16
UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3; Sulfolo... 87 2e-16
UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 87 3e-16
UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1; Archaeo... 85 8e-16
UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1; Staphyl... 77 3e-13
UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6; Pyrobac... 76 5e-13
UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmenta... 76 7e-13
UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2; Thermop... 75 9e-13
UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4; Thermop... 74 3e-12
UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1; Ostreo... 72 8e-12
UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genom... 69 6e-11
UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1; ... 67 3e-10
UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1; ... 66 4e-10
UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole gen... 66 5e-10
UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivi... 65 9e-10
UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces cap... 65 1e-09
UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2; Nanoarc... 58 1e-07
UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2; Deinococ... 54 2e-06
UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1; ... 53 4e-06
UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9; Mycoplas... 51 2e-05
UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponem... 49 6e-05
UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3; Planctom... 49 9e-05
UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197; Bacter... 48 1e-04
UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19; Bactero... 48 1e-04
UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellula... 48 1e-04
UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94; Bacteri... 47 3e-04
UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobact... 46 5e-04
UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zin... 46 5e-04
UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5; Thermoto... 45 0.001
UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27; Bacteri... 44 0.003
UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1; ... 42 0.010
UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39; Bacteri... 42 0.010
UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10; Chlorob... 42 0.013
UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18; Bacteri... 41 0.017
UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n... 40 0.030
UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3; Entomopl... 40 0.030
UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococc... 40 0.040
UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3; n... 40 0.053
UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella... 39 0.069
UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4; Leptospi... 39 0.092
UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellul... 38 0.12
UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n... 38 0.12
UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1; ... 38 0.21
UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.49
UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC pre... 36 0.85
UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplas... 36 0.85
UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1; ... 35 1.5
UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1; Neoricke... 35 1.5
UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;... 34 2.0
UniRef50_A7R9B1 Cluster: Chromosome undetermined scaffold_3592, ... 34 2.0
UniRef50_Q8M9V0 Cluster: Chloroplast 30S ribosomal protein S3; n... 33 4.6
UniRef50_Q5CD89 Cluster: Outer membrane protein; n=8; Histophilu... 33 6.0
UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8; Euteleos... 33 6.0
UniRef50_Q225J0 Cluster: Putative uncharacterized protein; n=1; ... 32 8.0
UniRef50_P22367 Cluster: 6-methylsalicylic acid synthase; n=9; A... 32 8.0
>UniRef50_P23396 Cluster: 40S ribosomal protein S3; n=174;
Eukaryota|Rep: 40S ribosomal protein S3 - Homo sapiens
(Human)
Length = 243
Score = 279 bits (685), Expect = 2e-74
Identities = 139/153 (90%), Positives = 146/153 (95%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
MAV ISKKRKFV DG+FKAELNEFLTRELAEDGYSGVEVRVTP R+EIII+ATRTQ+VL
Sbjct: 1 MAVQ-ISKKRKFVADGIFKAELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVL 59
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GEKGRRIRELT+VVQKRF PE SVELYAEKVATRGLCAIAQAESLRYKL+GGLAVRRAC
Sbjct: 60 GEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRAC 119
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKF 471
YGVLRFIMESGA+GCEVVVSGKLRGQRAKSMKF
Sbjct: 120 YGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKF 152
Score = 59.7 bits (138), Expect = 5e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
FVDGLMIHSGDP N YV+TA RHVLLRQGVL
Sbjct: 152 FVDGLMIHSGDPVNYYVDTAVRHVLLRQGVL 182
>UniRef50_Q38EW1 Cluster: 40S ribosomal protein S3, putative; n=4;
Trypanosoma|Rep: 40S ribosomal protein S3, putative -
Trypanosoma brucei
Length = 266
Score = 202 bits (494), Expect = 3e-51
Identities = 95/148 (64%), Positives = 122/148 (82%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
+SKKR V DGVF AEL EFL RELA+DG++GVE RVTP R+EI+I +T+T+ VLGEKGR
Sbjct: 56 LSKKRMMVRDGVFYAELFEFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGR 115
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
RIRELT+ +Q+RFN E ++L+AE+V RGL A+AQAESLR+KL+ L VRRA G++R
Sbjct: 116 RIRELTACLQQRFNYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIR 175
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKF 471
++MESGA+GCEV + GK++GQRAKSM F
Sbjct: 176 YVMESGAKGCEVTIGGKIKGQRAKSMTF 203
Score = 33.9 bits (74), Expect = 2.6
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 467 SFVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
+F DG MI SG +V+TATRH LR G +
Sbjct: 202 TFRDGYMIKSGTAHKHFVDTATRHCHLRAGTI 233
>UniRef50_Q59N00 Cluster: Likely cytosolic ribosomal protein S3;
n=4; Saccharomycetales|Rep: Likely cytosolic ribosomal
protein S3 - Candida albicans (Yeast)
Length = 251
Score = 194 bits (472), Expect = 2e-48
Identities = 92/148 (62%), Positives = 115/148 (77%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
+SKK+K V DGVF AELNEF TRELAE GY+GVEVR TP + E+I+ A+ TQ VLGE+GR
Sbjct: 6 LSKKKKLVADGVFYAELNEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGR 65
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
RI ELTS++ KRF + + + +YAE+V RGL A QAE+L+ KL+ GL +RRA YGVLR
Sbjct: 66 RIHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLR 125
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKF 471
F M +GA+G EVV+SGKLR RAKS K+
Sbjct: 126 FAMGAGAKGVEVVISGKLRAARAKSQKY 153
Score = 48.4 bits (110), Expect = 1e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
+ DG MIHSG P D+++ A RHVL+RQGVL
Sbjct: 153 YADGFMIHSGQPTRDFIDIAIRHVLMRQGVL 183
>UniRef50_A2DIM3 Cluster: Ribosomal protein S3, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3,
putative - Trichomonas vaginalis G3
Length = 216
Score = 167 bits (406), Expect = 2e-40
Identities = 75/153 (49%), Positives = 108/153 (70%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
M +K R+ + G+F AELNE LTREL ++GY G EVR TP R+EIII A T+ +
Sbjct: 1 MKAQRCTKVRRIIETGLFYAELNELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFV 60
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
GRR++E+ ++QKR+ + E S+E++ +++ +GL A+ Q ESLRYKLI + RRA
Sbjct: 61 DNHGRRLQEVRMMIQKRWRLKEDSLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAA 120
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKF 471
Y ++RF+M++GARGCEV +SGKLRG RA + K+
Sbjct: 121 YSIIRFVMDAGARGCEVAISGKLRGARASTSKY 153
>UniRef50_Q22AV9 Cluster: KH domain containing protein; n=3;
Oligohymenophorea|Rep: KH domain containing protein -
Tetrahymena thermophila SB210
Length = 253
Score = 161 bits (392), Expect = 8e-39
Identities = 70/148 (47%), Positives = 110/148 (74%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
I+KK+KFV DGVF AEL+ F ++ L + GY+G+EVR TP ++EI I AT+ Q V+G +G+
Sbjct: 18 INKKKKFVADGVFNAELHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGK 77
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
+ +ELT +QKRF + ++++AE + +GLCA AQ E++ YKL+ + VR A +++
Sbjct: 78 KHKELTQFLQKRFGYSDDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIK 137
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKF 471
+++ GA+GCE+++SGKL+ QRAK+MKF
Sbjct: 138 SVIQDGAKGCEIIISGKLKQQRAKTMKF 165
Score = 39.5 bits (88), Expect = 0.053
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F G MI +G P NDY++ A RHV +QG++
Sbjct: 165 FKQGYMICTGQPKNDYIDVAVRHVFFKQGIM 195
>UniRef50_A7NTL0 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 617
Score = 158 bits (384), Expect = 7e-38
Identities = 82/114 (71%), Positives = 93/114 (81%)
Frame = +1
Query: 19 VNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGE 198
V +SKKRKF DGVF A LNE LTREL E+GYSG EVRVTP+ +EIII AT+T +VLGE
Sbjct: 2 VTQMSKKRKFAVDGVFFAGLNEVLTRELVENGYSGDEVRVTPMCTEIIIRATQTHNVLGE 61
Query: 199 KGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAV 360
KG++I+ELTSVVQKRF E SVEL AEKV RG AIAQAESLRYKL+GGLA+
Sbjct: 62 KGKKIKELTSVVQKRFEFLENSVELCAEKVNNRGFYAIAQAESLRYKLLGGLAM 115
Score = 40.3 bits (90), Expect = 0.030
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F DG +I SG P DY++ A RHV LRQGVL
Sbjct: 126 FKDGYLISSGQPVKDYIDLAVRHV-LRQGVL 155
>UniRef50_A7NXL1 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 243
Score = 133 bits (321), Expect = 3e-30
Identities = 66/91 (72%), Positives = 76/91 (83%)
Frame = +1
Query: 154 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLR 333
EIII AT+TQ+VLG+KGR+IRELTSVVQKRF E +VELYAEK R AIAQAESLR
Sbjct: 101 EIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAESLR 160
Query: 334 YKLIGGLAVRRACYGVLRFIMESGARGCEVV 426
+KL+GGL VRRA YGVL F+MESG +GCEV+
Sbjct: 161 FKLLGGLVVRRAGYGVLSFVMESGTKGCEVI 191
Score = 39.9 bits (89), Expect = 0.040
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +2
Query: 485 MIHSGDPCNDYVNTATRHVLLRQGVL 562
+I SG P DY+N+ RHVLL+QGVL
Sbjct: 195 IISSGQPVKDYINSVVRHVLLKQGVL 220
>UniRef50_Q8SQM3 Cluster: 40S ribosomal protein S3; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S3 -
Encephalitozoon cuniculi
Length = 228
Score = 126 bits (304), Expect = 4e-28
Identities = 57/143 (39%), Positives = 93/143 (65%)
Frame = +1
Query: 43 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 222
+F+ +G+ AEL EF + L +G+S +E+R+ +II+ + +GEK R+R+
Sbjct: 21 RFMKNGLMNAELKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQF 80
Query: 223 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 402
+ +R +P++SVE+ EKV +GLCA+ QA +R K++GG+ RRA L+ +
Sbjct: 81 QHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHA 140
Query: 403 GARGCEVVVSGKLRGQRAKSMKF 471
A+GC+++VSGKL+GQRAKS+KF
Sbjct: 141 KAQGCQIIVSGKLKGQRAKSVKF 163
Score = 38.7 bits (86), Expect = 0.092
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F DG++IHSGD DY+NT V +QGV+
Sbjct: 163 FQDGVLIHSGDAVKDYINTGYATVETKQGVI 193
>UniRef50_Q8U004 Cluster: 30S ribosomal protein S3P; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Pyrococcus furiosus
Length = 210
Score = 116 bits (280), Expect = 3e-25
Identities = 60/145 (41%), Positives = 92/145 (63%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
+R F+ + V + ++EFL +EL GY G++++ TP+ +++II A V+G GRRIR
Sbjct: 4 ERYFIREAVREMLIDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIR 63
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
ELT +++K+F + +E+ E++ L A QA L L G+ RRA Y LR IM
Sbjct: 64 ELTRILEKQFGLENPQIEV--EEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIM 121
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
+GARG E+ +SGKL G+RAKS++F
Sbjct: 122 NNGARGVEIRLSGKLTGERAKSIRF 146
>UniRef50_Q7QNT9 Cluster: GLP_157_11435_12088; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_157_11435_12088 - Giardia lamblia
ATCC 50803
Length = 217
Score = 106 bits (254), Expect = 4e-22
Identities = 51/143 (35%), Positives = 86/143 (60%)
Frame = +1
Query: 43 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 222
K++ D + +AEL+EF +REL + GY+ + T +II + V+G+ R+ ++
Sbjct: 16 KYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLHKI 75
Query: 223 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 402
++ RF ++ ++ +K+ RGL A ++LR KL + +RRA Y ++R M +
Sbjct: 76 EYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAMRA 135
Query: 403 GARGCEVVVSGKLRGQRAKSMKF 471
GA GCEV+V+GKLR QRA++ KF
Sbjct: 136 GAAGCEVIVAGKLRAQRARANKF 158
Score = 32.7 bits (71), Expect = 6.0
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F +G +I +G P ++ ATRH+ +RQGV+
Sbjct: 158 FKEGCLISTGHPKRIFLAEATRHIKMRQGVI 188
>UniRef50_A3CT03 Cluster: 30S ribosomal protein S3P; n=4;
Archaea|Rep: 30S ribosomal protein S3P - Methanoculleus
marisnigri (strain ATCC 35101 / DSM 1498 / JR1)
Length = 234
Score = 103 bits (248), Expect = 2e-21
Identities = 54/145 (37%), Positives = 87/145 (60%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
++KF+ DGV + +FLT+EL GY G+++ TP+ +++ I A + V+G+ G+++R
Sbjct: 4 EKKFITDGVRNVRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVR 63
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+LT + ++I VE+ ++V A AE L L G R+A +R IM
Sbjct: 64 QLTQDLATDYDIESPQVEV--QQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIM 121
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
ESGA GCEV+V+GKL G R+++ KF
Sbjct: 122 ESGALGCEVIVAGKLTGSRSRTQKF 146
>UniRef50_Q8TRU1 Cluster: 30S ribosomal protein S3P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S3P -
Methanosarcina acetivorans
Length = 318
Score = 101 bits (242), Expect = 1e-20
Identities = 52/145 (35%), Positives = 87/145 (60%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
++KFV DG KA ++E+ +L+ GY G+E+ TP+ ++I+I + + V+G+ G+ IR
Sbjct: 4 EKKFVNDGYVKASMDEYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIR 63
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+LT V ++++ ++ A++V L A A L + G R+A + LR +M
Sbjct: 64 KLTRDVANKYSLENPQID--AQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVM 121
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
+GA GCEVV+SGKL G R++ KF
Sbjct: 122 NAGALGCEVVISGKLTGARSRVEKF 146
>UniRef50_Q8TX35 Cluster: 30S ribosomal protein S3P; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3P -
Methanopyrus kandleri
Length = 227
Score = 99.5 bits (237), Expect = 5e-20
Identities = 56/154 (36%), Positives = 86/154 (55%)
Frame = +1
Query: 10 IMAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSV 189
+M N+ +KFV G+ K EL+E+L EL GY G+ ++ P ++II R
Sbjct: 2 VMYGENVPVHKKFVQYGMLKTELDEYLEEELGRAGYGGMRLQRVPNATKIIAYVERPAIA 61
Query: 190 LGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRA 369
+G +GR IR + VQ+RF + + V + +++ + L A L L G+ RRA
Sbjct: 62 IGRRGRNIRRVEEEVQERFPLLGR-VSIEVKELPSPELNPRVVARRLASALERGIHFRRA 120
Query: 370 CYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKF 471
YG LR IM +GA+G +++SGKL G RA++ KF
Sbjct: 121 AYGALRRIMNAGAKGAMIILSGKLIGARARTEKF 154
>UniRef50_P20281 Cluster: 30S ribosomal protein S3P; n=5;
Halobacteriaceae|Rep: 30S ribosomal protein S3P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 304
Score = 98.3 bits (234), Expect = 1e-19
Identities = 51/150 (34%), Positives = 93/150 (62%)
Frame = +1
Query: 28 ISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGR 207
++ +++F+ DG+ + +++EF EL GY G++V TP+ ++I++ A + V+G+ G+
Sbjct: 1 MADEQQFIEDGLQRTQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGK 60
Query: 208 RIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLR 387
IR++T+ ++ RFN+ + V++ ++V L A A+ L L G R+A + +
Sbjct: 61 NIRKITTELEDRFNLDDPQVDV--QEVDEPDLNARIVADRLANALERGWYFRKAGHTTID 118
Query: 388 FIMESGARGCEVVVSGKLRGQRAKSMKFCR 477
IMESGA G E+V+SGK+ G R++ KF R
Sbjct: 119 RIMESGALGAEIVLSGKVTGARSRVEKFNR 148
>UniRef50_O26116 Cluster: 30S ribosomal protein S3P; n=3;
Methanobacteriaceae|Rep: 30S ribosomal protein S3P -
Methanobacterium thermoautotrophicum
Length = 258
Score = 96.7 bits (230), Expect = 3e-19
Identities = 48/145 (33%), Positives = 86/145 (59%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
++ FV +G+ + ++E+L +EL GY G++V+VTP+ + +++ A R V+G G+ +R
Sbjct: 3 EKDFVVEGLRRTRIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVR 62
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+T ++ +F++ VE+ ++V L A + L G+ RR Y +R IM
Sbjct: 63 AITQKLKNKFDLENPQVEV--KEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIM 120
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
+GA+G EV +SGK+RG R+ + KF
Sbjct: 121 AAGAQGVEVTISGKIRGARSATAKF 145
>UniRef50_UPI00015BB204 Cluster: SSU ribosomal protein S3P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S3P - Ignicoccus hospitalis KIN4/I
Length = 241
Score = 96.3 bits (229), Expect = 4e-19
Identities = 56/153 (36%), Positives = 90/153 (58%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
M+V + K+ F+ + + +++E+L + GYS VE++ TP+ + +II A R+ +++
Sbjct: 1 MSVAKKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAII 60
Query: 193 GEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRAC 372
G +G+ I+++T V+++ F IP V + KV L A A L L G RRA
Sbjct: 61 GRRGQTIKQITKVLEEWFGIPNPQVTVV--KVEEPELDARVMAFRLANALQRGFHFRRAA 118
Query: 373 YGVLRFIMESGARGCEVVVSGKLRGQRAKSMKF 471
Y LR IM +GA G +V VSGKLRG+RA+ K+
Sbjct: 119 YTTLRRIMGAGAIGAQVKVSGKLRGERARFEKY 151
>UniRef50_UPI00005A35DE Cluster: PREDICTED: similar to 40S ribosomal
protein S3; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S3 - Canis familiaris
Length = 161
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/57 (78%), Positives = 51/57 (89%)
Frame = +1
Query: 31 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEK 201
SKKR+FV DG+F+AELNEFLTRELAEDG S VEVRVTP + EIII+ TRTQ+VLGEK
Sbjct: 6 SKKRQFVADGIFRAELNEFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEK 62
Score = 44.8 bits (101), Expect = 0.001
Identities = 21/31 (67%), Positives = 23/31 (74%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
FVD MIHS D N YV+T+ HVLLRQGVL
Sbjct: 106 FVDDSMIHSRDCVNHYVDTSVHHVLLRQGVL 136
Score = 43.2 bits (97), Expect = 0.004
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 391 IMESGARGCEVVVSGKLRGQRAKSMKF 471
+ ESGA+G E +VSGKL+GQRAKS KF
Sbjct: 80 VQESGAKGYEAMVSGKLQGQRAKSAKF 106
>UniRef50_Q6LXE7 Cluster: 30S ribosomal protein S3P; n=5;
Methanococcus|Rep: 30S ribosomal protein S3P -
Methanococcus maripaludis
Length = 211
Score = 89.8 bits (213), Expect = 4e-17
Identities = 43/145 (29%), Positives = 81/145 (55%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
+R FVG+ V + ++E+ +L GYS ++ + TPI + I + A + V+G KG+ ++
Sbjct: 3 ERTFVGENVSETLIDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVK 62
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
ELT + +++ +E+ ++V L + L G+ R+ + +R +M
Sbjct: 63 ELTETLATEYSVKNPQIEV--KQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVM 120
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
SGA+G ++VSGKL G+R+++ KF
Sbjct: 121 GSGAKGVAIIVSGKLSGERSRTEKF 145
>UniRef50_A1RXG6 Cluster: 30S ribosomal protein S3P; n=2;
Thermofilum pendens Hrk 5|Rep: 30S ribosomal protein S3P
- Thermofilum pendens (strain Hrk 5)
Length = 202
Score = 87.8 bits (208), Expect = 2e-16
Identities = 50/146 (34%), Positives = 78/146 (53%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
RK + G+ LNE+L R+L Y + TPI +++I+ A V+G KG I+
Sbjct: 6 RKVISQGLQYMMLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKA 65
Query: 220 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 399
+ V+++ F I +++ +V + L A A + L+ G+ RRA L IM
Sbjct: 66 IAEVLEREFGIENPQIDVV--EVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMA 123
Query: 400 SGARGCEVVVSGKLRGQRAKSMKFCR 477
+GARG E+V+SGKL QR ++ KF R
Sbjct: 124 AGARGAEIVISGKLTSQRHRTEKFTR 149
>UniRef50_Q4JB46 Cluster: 30S ribosomal protein S3P; n=3;
Sulfolobaceae|Rep: 30S ribosomal protein S3P -
Sulfolobus acidocaldarius
Length = 231
Score = 87.4 bits (207), Expect = 2e-16
Identities = 52/144 (36%), Positives = 78/144 (54%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
KR F+ K ++E+L ++ Y+GVE+ TPI + +II A R ++G+ G+ I+
Sbjct: 5 KRHFLQKAAIKVMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIK 64
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+L V++K F + + + A + L A A L L G RRA + +R IM
Sbjct: 65 QLAQVLEKFFGLENPQITVTAAE--NPELNARVMAFRLAIALEKGYHFRRAAFITIRRIM 122
Query: 397 ESGARGCEVVVSGKLRGQRAKSMK 468
SGA G EV+VSGKL +RAK K
Sbjct: 123 SSGAVGAEVIVSGKLTSERAKYEK 146
>UniRef50_Q9UXA0 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P - Sulfolobus
solfataricus
Length = 229
Score = 86.6 bits (205), Expect = 3e-16
Identities = 49/144 (34%), Positives = 79/144 (54%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
KR F+ + K +++E+L ++ Y+GVEV TPI + +II A R ++G GR I+
Sbjct: 5 KRYFLEKSIVKVKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIK 64
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+L + +K F + ++ ++ V L A A L L G RRA + +R IM
Sbjct: 65 QLAQIFEKVFGL--ENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIM 122
Query: 397 ESGARGCEVVVSGKLRGQRAKSMK 468
+GA G E+++SGKL +RA+ K
Sbjct: 123 NAGALGAEIIISGKLTTERARYEK 146
>UniRef50_O28360 Cluster: 30S ribosomal protein S3P; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3P -
Archaeoglobus fulgidus
Length = 229
Score = 85.4 bits (202), Expect = 8e-16
Identities = 53/149 (35%), Positives = 82/149 (55%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
+RKFV + + K + E++ E+ G+ GV++ TP+ +++ + R V+G+ GRRI+
Sbjct: 4 ERKFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIK 63
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
LT + K F I V + ++V A A L L G RRA Y L IM
Sbjct: 64 ALTEKL-KDFGIENPQVSV--DEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIM 120
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKFCRWT 483
E+GA+GCE+ +SGKL +RA++ KF T
Sbjct: 121 EAGAKGCEIEISGKLVSERARTEKFVAGT 149
>UniRef50_A3DNB3 Cluster: 30S ribosomal protein S3P; n=1;
Staphylothermus marinus F1|Rep: 30S ribosomal protein
S3P - Staphylothermus marinus (strain ATCC 43588 / DSM
3639 / F1)
Length = 224
Score = 77.0 bits (181), Expect = 3e-13
Identities = 46/144 (31%), Positives = 75/144 (52%)
Frame = +1
Query: 37 KRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIR 216
K F+ + K L+EFL + GY+G+E+ TP ++I A ++G G IR
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 217 ELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+L +++Q F + ++V + V L A A + L + RR +LR +M
Sbjct: 67 KLMTIMQTHFGL--ENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVM 124
Query: 397 ESGARGCEVVVSGKLRGQRAKSMK 468
E+GA G E+++SGKLR +RA+ K
Sbjct: 125 EAGAVGAEIIISGKLRSERARYEK 148
>UniRef50_Q8ZWI0 Cluster: 30S ribosomal protein S3P; n=6;
Pyrobaculum|Rep: 30S ribosomal protein S3P - Pyrobaculum
aerophilum
Length = 218
Score = 76.2 bits (179), Expect = 5e-13
Identities = 40/144 (27%), Positives = 77/144 (53%), Gaps = 1/144 (0%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
+K + + K + EFL L++ GY E+ TP+ + I+I A R ++G KG ++E
Sbjct: 12 KKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKE 71
Query: 220 LTSVVQKRFNIPEQSVELY-AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM 396
+++++ + + +++ K+ + A + + G+ RR + +R +M
Sbjct: 72 ISNILTTKLGVENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLM 131
Query: 397 ESGARGCEVVVSGKLRGQRAKSMK 468
E+GA+G E+VVSGKL +RA+ K
Sbjct: 132 EAGAKGFEIVVSGKLSTERARFEK 155
>UniRef50_Q673S3 Cluster: Ribosomal protein S3; n=2; environmental
samples|Rep: Ribosomal protein S3 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 307
Score = 75.8 bits (178), Expect = 7e-13
Identities = 44/144 (30%), Positives = 74/144 (51%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
R F+ V + + E+L RE G+ G+E TP +++ + A + V+G +G+ I E
Sbjct: 9 RTFINRNVERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHE 68
Query: 220 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 399
L ++ F + +E+ ++ L A A L L G RRA + + IM+
Sbjct: 69 LQYRLKSDFKLENPRLEV--NEIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMD 126
Query: 400 SGARGCEVVVSGKLRGQRAKSMKF 471
+GARGC +++SGK+ G R + KF
Sbjct: 127 AGARGCLIILSGKISGPRHRVQKF 150
>UniRef50_A0RVX9 Cluster: 30S ribosomal protein S3P; n=2;
Thermoprotei|Rep: 30S ribosomal protein S3P -
Cenarchaeum symbiosum
Length = 261
Score = 75.4 bits (177), Expect = 9e-13
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
+L EFL + + G+SGVEV P ++I + TR V+G KG IRELT ++K F++
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME-SGARGCEVVV 429
V++ +++ T L + + G A RRA ++ IME A G ++ +
Sbjct: 76 KSPQVDV--KEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITI 133
Query: 430 SGKLRGQRA 456
SGKLRG R+
Sbjct: 134 SGKLRGDRS 142
>UniRef50_Q9HIR5 Cluster: 30S ribosomal protein S3P; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S3P -
Thermoplasma acidophilum
Length = 225
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/146 (26%), Positives = 79/146 (54%)
Frame = +1
Query: 34 KKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRI 213
K+RKF+ + V + + E++ +E G+ + ++ TP + I + R V+G +G ++
Sbjct: 2 KERKFINEAVKRLLVCEYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKV 61
Query: 214 RELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFI 393
+++T ++K++ I +E+ + V L A+ + L G + R+A L
Sbjct: 62 QQMTDTLEKKYGIETPQIEV--KDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRT 119
Query: 394 MESGARGCEVVVSGKLRGQRAKSMKF 471
+++GA+G + +SGK+ G+RA+ KF
Sbjct: 120 IQAGAKGVLIKISGKISGERARYQKF 145
>UniRef50_Q01BA3 Cluster: Putative ribosomal protein; n=1;
Ostreococcus tauri|Rep: Putative ribosomal protein -
Ostreococcus tauri
Length = 145
Score = 72.1 bits (169), Expect = 8e-12
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +1
Query: 358 VRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKF 471
VR ACYGVLR+IMESGA+G EVVVSGKLRGQRAK+MKF
Sbjct: 30 VRSACYGVLRYIMESGAKGAEVVVSGKLRGQRAKAMKF 67
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F DG MI SG+P DY+ + TRH LLRQG +
Sbjct: 67 FKDGYMISSGNPVRDYIVSCTRHALLRQGTI 97
>UniRef50_A7NXL5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_2, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 149
Score = 69.3 bits (162), Expect = 6e-11
Identities = 33/45 (73%), Positives = 39/45 (86%)
Frame = +1
Query: 97 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 231
+++EDGYSGV+VRVTP+R EIII ATRTQ+ LGEK RRIREL V
Sbjct: 16 DISEDGYSGVQVRVTPMRMEIIIHATRTQNALGEKRRRIRELILV 60
>UniRef50_A5DF25 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 278
Score = 66.9 bits (156), Expect = 3e-10
Identities = 39/141 (27%), Positives = 70/141 (49%)
Frame = -2
Query: 456 GTLTTQLARYNNFTTTGARFHDETENTIASTTYSETSDKLVS*RFGLGDSAKTTSSHLFS 277
G+ ++Q +N T H ++++T+ +++ +T +L FGL S +T+
Sbjct: 124 GSSSSQFTGDDNLHTLSTSSHGKSQHTVGGSSHWQTVQQLGFQGFGLDSSGQTSLLDSLG 183
Query: 276 IQFYRLLWNVESLLYYGSQLTDSASFLSEHTLCPGGHNNDLRADGSDPDFHAGVAVLGQL 97
+ +ESL G QL DS S S++TL G +N+L+ D + GV + Q
Sbjct: 184 VDDNSFRRQLESLDNQGGQLVDSTSLFSQNTLGVGSLDNNLQLGWGLSDLNTGVTLFSQF 243
Query: 96 PSEELIEFRLENSISNKFSLL 34
EE ++ +E++IS + S L
Sbjct: 244 SGEEFVQLGVEDTISYQLSFL 264
>UniRef50_A5ATU8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 286
Score = 66.5 bits (155), Expect = 4e-10
Identities = 31/46 (67%), Positives = 38/46 (82%)
Frame = +1
Query: 97 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVV 234
++ EDGYS V+VRVTP+ EII+ ATRTQ+ L EKGRRIRELT V+
Sbjct: 139 DILEDGYSNVKVRVTPMGMEIIVRATRTQNALSEKGRRIRELTLVM 184
>UniRef50_A7QEK7 Cluster: Chromosome chr17 scaffold_85, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr17 scaffold_85, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 514
Score = 66.1 bits (154), Expect = 5e-10
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +1
Query: 97 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSV 231
++ EDGYS V+VRVTP+ EIII ATRTQ+ L EKGRRIRELT V
Sbjct: 406 DILEDGYSDVKVRVTPMGMEIIIRATRTQNALSEKGRRIRELTLV 450
Score = 42.7 bits (96), Expect = 0.006
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 97 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVL 192
++ EDGYS ++V+VT +R EIII ATRTQ+ L
Sbjct: 281 DIPEDGYSDIKVKVTGMRMEIIIHATRTQNAL 312
>UniRef50_A3H696 Cluster: Ribosomal protein S3-like; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3-like -
Caldivirga maquilingensis IC-167
Length = 226
Score = 65.3 bits (152), Expect = 9e-10
Identities = 34/144 (23%), Positives = 74/144 (51%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
++ + D K + E+L L + Y ++ T + + I+I+A + ++G KG++++
Sbjct: 3 KRIIDDNKKKWMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKA 62
Query: 220 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 399
L +++ +FN+ +++ E +A + + G+ RRA LR + E
Sbjct: 63 LADILKSKFNLDNVVIDVIQEPHPEYNARLVAL--RIADAMAKGIRFRRAAIIALRQLQE 120
Query: 400 SGARGCEVVVSGKLRGQRAKSMKF 471
+ +G EV++SGKL +R++ K+
Sbjct: 121 ANVQGAEVIISGKLTTERSRFEKY 144
>UniRef50_A6R2L3 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 151
Score = 64.9 bits (151), Expect = 1e-09
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +1
Query: 25 NISKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEII 162
+ISK+RKFV GVF A LN F RELAE+GYSGVEVRVTP ++II
Sbjct: 84 DISKRRKFVVGGVFYAGLNGFFLRELAEEGYSGVEVRVTPTGTDII 129
>UniRef50_Q74MZ4 Cluster: 30S ribosomal protein S3P; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3P -
Nanoarchaeum equitans
Length = 230
Score = 58.4 bits (135), Expect = 1e-07
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 1/145 (0%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
RKF+ + EF+ L S V +R TPI + +II + R + + E R
Sbjct: 7 RKFIQNAKLTVFSQEFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEE---RKAH 63
Query: 220 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGL-AVRRACYGVLRFIM 396
L +++ +F + + +E+ + L A AE L + + A RR L IM
Sbjct: 64 LAKLLELKFGLEKPVIEVLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIM 121
Query: 397 ESGARGCEVVVSGKLRGQRAKSMKF 471
+GA G E+V++G+L GQR K+ +F
Sbjct: 122 NAGAIGAEIVIAGRLSGQRGKTWRF 146
>UniRef50_Q9RXJ6 Cluster: 30S ribosomal protein S3; n=2;
Deinococcus|Rep: 30S ribosomal protein S3 - Deinococcus
radiodurans
Length = 249
Score = 54.4 bits (125), Expect = 2e-06
Identities = 34/133 (25%), Positives = 71/133 (53%), Gaps = 1/133 (0%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ + + ++LA G + +E+ + +II A + V+G+ G I+EL +++ +
Sbjct: 38 QIRQLINKKLAAAGIARIEIERAGQQVNVIISAAKPGVVIGKGGESIKELRGDIERL--V 95
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
+V + ++ + A A + ++ A RRA + +MESGARG +V++S
Sbjct: 96 SAGTVAVNVAEIPNPNISAPLVALRIAEQIERRFAFRRAMKQAAQRVMESGARGVKVILS 155
Query: 433 GKLRG-QRAKSMK 468
G+L G ++A++ K
Sbjct: 156 GRLGGAEQARTEK 168
>UniRef50_A5B260 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 414
Score = 53.2 bits (122), Expect = 4e-06
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 97 ELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQ 237
++ EDGYS ++V+VT + EIII AT+TQ+ L E GR++RELT V +
Sbjct: 238 DIPEDGYSDIKVKVTGMCMEIIIRATQTQNALIENGRKMRELTLVTR 284
>UniRef50_Q6KI49 Cluster: 30S ribosomal protein S3; n=9;
Mycoplasma|Rep: 30S ribosomal protein S3 - Mycoplasma
mobile
Length = 225
Score = 50.8 bits (116), Expect = 2e-05
Identities = 29/97 (29%), Positives = 48/97 (49%)
Frame = +1
Query: 157 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 336
+++ + + ++LG+ G I +LT +QK E + + + L AI AE +
Sbjct: 67 VLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIILAEQIAI 126
Query: 337 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 447
KL R A +R M+SGA+G + VSG+L G
Sbjct: 127 KLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNG 163
>UniRef50_O83225 Cluster: 30S ribosomal protein S3; n=1; Treponema
pallidum|Rep: 30S ribosomal protein S3 - Treponema
pallidum
Length = 247
Score = 49.2 bits (112), Expect = 6e-05
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 8/153 (5%)
Frame = +1
Query: 13 MAVNNISKKRKFVGDGVFKAELNEFLT--------RELAEDGYSGVEVRVTPIRSEIIIM 168
+ +N + R + G + A L+E L E + VE+ P R +++
Sbjct: 12 LGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIVRHPQRVTVVMH 71
Query: 169 ATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIG 348
R V+G KG I ++ + VQKR N + V++ +++ L A A+++ +L
Sbjct: 72 TARPGVVIGAKGVNIEKIGAEVQKRLN---KKVQIKVKEIKRMELNAYLVAQNVARQLTA 128
Query: 349 GLAVRRACYGVLRFIMESGARGCEVVVSGKLRG 447
++ R+ M+SGA+G ++ VSG+L G
Sbjct: 129 RVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGG 161
>UniRef50_Q7UN14 Cluster: 30S ribosomal protein S3; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S3 -
Rhodopirellula baltica
Length = 236
Score = 48.8 bits (111), Expect = 9e-05
Identities = 37/144 (25%), Positives = 73/144 (50%), Gaps = 5/144 (3%)
Frame = +1
Query: 31 SKKRKFVGDGVFKAELNEFLTRELAEDGY--SGVE-VRVTPIRSEIIIM--ATRTQSVLG 195
+ K+ F V ++ EF+T+ + Y +G++ + + R E+ +M R ++G
Sbjct: 24 ASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRIEIERTRDEVRVMLYVARPGLIIG 83
Query: 196 EKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACY 375
+KG+ I L + +Q N+ + + L E+V L A AE + +L + RR
Sbjct: 84 KKGQEIEILQAELQ---NLVGRRINLKVEEVGRPELQAQLVAEDISQQLAKRSSFRRTMK 140
Query: 376 GVLRFIMESGARGCEVVVSGKLRG 447
+L M++GA+G ++ ++G+L G
Sbjct: 141 RMLEQTMDAGAKGIKIQMAGRLGG 164
>UniRef50_Q12GW5 Cluster: 30S ribosomal protein S3; n=197;
Bacteria|Rep: 30S ribosomal protein S3 - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 301
Score = 48.4 bits (110), Expect = 1e-04
Identities = 39/155 (25%), Positives = 68/155 (43%)
Frame = +1
Query: 31 SKKRKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRR 210
+ R F G ++ E+L +L S V + + I I + R V+G+KG
Sbjct: 24 ASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERPAKNARITIFSARPGVVIGKKGED 83
Query: 211 IRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRF 390
I L + ++ +P V + E+V + A A+S+ +L + RRA ++
Sbjct: 84 IENLKKELSRQLGVP---VAVNIEEVRKPEIDAKLIADSITQQLEKRIMFRRAMKRAMQN 140
Query: 391 IMESGARGCEVVVSGKLRGQRAKSMKFCRWTHDPL 495
M GA G +++ SG+L G ++ R PL
Sbjct: 141 AMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPL 175
>UniRef50_Q7MTL9 Cluster: 30S ribosomal protein S3; n=19;
Bacteroidetes|Rep: 30S ribosomal protein S3 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 246
Score = 48.0 bits (109), Expect = 1e-04
Identities = 34/135 (25%), Positives = 66/135 (48%), Gaps = 1/135 (0%)
Frame = +1
Query: 70 AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN 249
+ + ++L LA+ S + + I I R ++G+ G+ + +L +++
Sbjct: 36 SRIRQYLNARLAKASVSRIVIERALKLVTITICTARPGMIIGKAGQEVDKLKEELKR--- 92
Query: 250 IPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 429
I ++ V++ ++ L A AE++ +L G +A RRA + M GA G ++ V
Sbjct: 93 ITKKDVQINIYEIRKPELDAAIVAENIARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQV 152
Query: 430 SGKLRG-QRAKSMKF 471
SG+L G + A+S F
Sbjct: 153 SGRLNGAEMARSEMF 167
>UniRef50_A1KB21 Cluster: 30S ribosomal protein S3; n=67; cellular
organisms|Rep: 30S ribosomal protein S3 - Azoarcus sp.
(strain BH72)
Length = 260
Score = 48.0 bits (109), Expect = 1e-04
Identities = 35/141 (24%), Positives = 65/141 (46%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ ++L + LA V + + + + + R V+G+KG I L +QK +
Sbjct: 38 KVRDYLKKRLAHASVGRVVIERPAKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGV 97
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
P V + E+V + A A+S+ +L + RRA ++ M GA+G +++ S
Sbjct: 98 P---VHVNIEEVRKPEIDAKLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSS 154
Query: 433 GKLRGQRAKSMKFCRWTHDPL 495
G+L G ++ R PL
Sbjct: 155 GRLNGAEIARTEWYREGRVPL 175
>UniRef50_Q2JFH0 Cluster: 30S ribosomal protein S3; n=94;
Bacteria|Rep: 30S ribosomal protein S3 - Frankia sp.
(strain CcI3)
Length = 315
Score = 46.8 bits (106), Expect = 3e-04
Identities = 37/152 (24%), Positives = 70/152 (46%)
Frame = +1
Query: 40 RKFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRE 219
+ +VG+ V ++ + ++R + G S V++ T R + I R V+G +G
Sbjct: 29 KAYVGEDV---KIRKMMSRGMERAGISRVDIERTQGRLRVDIHTARPGIVIGRRGAEADR 85
Query: 220 LTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIME 399
+ ++K + + V+L +V + A A+ + +L ++ RRA ++ M+
Sbjct: 86 IRGDLEK---LTGKQVQLNILEVKNPEVDAQLVAQGVAEQLSSRVSFRRAMRKAMQTAMK 142
Query: 400 SGARGCEVVVSGKLRGQRAKSMKFCRWTHDPL 495
GA+G V SG+L G +F R PL
Sbjct: 143 GGAKGIRVQCSGRLGGAEMSRSEFYREGRVPL 174
>UniRef50_A6EHQ8 Cluster: 30S ribosomal protein S3; n=1; Pedobacter
sp. BAL39|Rep: 30S ribosomal protein S3 - Pedobacter sp.
BAL39
Length = 281
Score = 46.4 bits (105), Expect = 5e-04
Identities = 30/134 (22%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ ++L+ +A+ G + V + T R + I R V+G+ G+ + ++ ++K +
Sbjct: 37 KIRKYLSARIAKGGVAKVVIERTLKRITVTIHTARPGIVIGKAGQEVDKIKEELKK---L 93
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
++ +++ ++ L A AE + +L ++ RRA + M GA G +++ S
Sbjct: 94 TKKEIQINIFEIKRPELDAQLVAEGVAKQLEARISFRRAMKSTIAATMRMGAEGIKIMTS 153
Query: 433 GKLRG-QRAKSMKF 471
G+L G + A+S ++
Sbjct: 154 GRLGGAEMARSEQY 167
>UniRef50_Q8LNX7 Cluster: Putative ribosomal protein S3; n=1; Zinnia
elegans|Rep: Putative ribosomal protein S3 - Zinnia
elegans (Zinnia)
Length = 143
Score = 46.4 bits (105), Expect = 5e-04
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +2
Query: 470 FVDGLMIHSGDPCNDYVNTATRHVLLRQGVL 562
F DG M+ SG P +Y+++A RHVLLRQGVL
Sbjct: 9 FKDGYMVSSGQPVKEYIDSAVRHVLLRQGVL 39
>UniRef50_P46772 Cluster: 30S ribosomal protein S3; n=5;
Thermotogaceae|Rep: 30S ribosomal protein S3 -
Thermotoga maritima
Length = 209
Score = 44.8 bits (101), Expect = 0.001
Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 1/126 (0%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN 249
E+ + + + G S + V R R I + R ++G KG I L ++++FN
Sbjct: 37 EIRKIIKNKYYHAGISEIYVERPDAERINITVKTARPGIIIGRKGSEITSLREELERKFN 96
Query: 250 IPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVV 429
+ V + E++ T L A AES+ ++ + + A + M GA+G +V+V
Sbjct: 97 ---RRVVINIEEIKTPELDAQLVAESIASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMV 153
Query: 430 SGKLRG 447
+G+L G
Sbjct: 154 AGRLGG 159
>UniRef50_Q6A6N2 Cluster: 30S ribosomal protein S3; n=27;
Bacteria|Rep: 30S ribosomal protein S3 -
Propionibacterium acnes
Length = 269
Score = 43.6 bits (98), Expect = 0.003
Identities = 34/135 (25%), Positives = 61/135 (45%)
Frame = +1
Query: 43 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 222
+ VG+ V ++ E+L + L G S +E+ R I + A R V+G G +
Sbjct: 30 ELVGEDV---KIREWLHKNLERAGLSSIEIERRSERVTIFLYAARPGIVIGRNGAEAERV 86
Query: 223 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 402
++K + + ++L +V + A A+ + +L +A RRA + M +
Sbjct: 87 RGELEK---LTGKQIQLNILEVKSPETDAQLVAQGIAEQLAARVAFRRAMRKAQQSAMNA 143
Query: 403 GARGCEVVVSGKLRG 447
GA G + SG+L G
Sbjct: 144 GALGIRIKCSGRLGG 158
>UniRef50_A6NXD5 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 283
Score = 41.9 bits (94), Expect = 0.010
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 1/134 (0%)
Frame = +1
Query: 49 VGDGVFK-AELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELT 225
VGD + + ++ +FL + G +E+ + I + R V+G+ G I L
Sbjct: 29 VGDLLVEDKKIRDFLKKTQYGAGIPKIEIERDNAKVRIYLHCARPGVVIGKGGEAIEALR 88
Query: 226 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESG 405
++K +SV L +V + A AE++ +L + RRA + M G
Sbjct: 89 LQLEKMLG---KSVALNIVEVKNPDMDAQLIAENIAQQLEKRIGFRRAMKNAMGRAMRMG 145
Query: 406 ARGCEVVVSGKLRG 447
ARG + VSG+L G
Sbjct: 146 ARGIKTQVSGRLGG 159
>UniRef50_P0A4C3 Cluster: 30S ribosomal protein S3; n=39;
Bacteria|Rep: 30S ribosomal protein S3 - Streptococcus
pneumoniae
Length = 217
Score = 41.9 bits (94), Expect = 0.010
Identities = 29/124 (23%), Positives = 59/124 (47%)
Frame = +1
Query: 76 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 255
+ +F+ +ELA+ S +E+ + + + + V+G+ G + L + + K +
Sbjct: 38 IRKFVQKELADAAVSTIEIERAVNKVNVSLHTAKPGMVIGKGGANVDALRAKLNK---LT 94
Query: 256 EQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 435
+ V + ++ L A E + +L +A RRA ++ M +GA+G + VSG
Sbjct: 95 GKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSG 154
Query: 436 KLRG 447
+L G
Sbjct: 155 RLNG 158
>UniRef50_Q8KAH8 Cluster: 30S ribosomal protein S3; n=10;
Chlorobiaceae|Rep: 30S ribosomal protein S3 - Chlorobium
tepidum
Length = 253
Score = 41.5 bits (93), Expect = 0.013
Identities = 35/135 (25%), Positives = 64/135 (47%)
Frame = +1
Query: 43 KFVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIREL 222
K D V + ++ L +E A G + + + T +I I A R +++G KG I L
Sbjct: 32 KIKQDQVIRNYVHARLKKEKA--GIAKIVIERTTKHIKINIYAARPGAIVGHKGEEINNL 89
Query: 223 TSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMES 402
+ Q+ I + V++ +V + A E++ Y+L ++ RRA ++ M +
Sbjct: 90 S---QELTRITGKEVKIDVIEVIKPEIEAQLIGENIAYQLENRVSFRRAMKMAIQQAMRA 146
Query: 403 GARGCEVVVSGKLRG 447
GA G + +G+L G
Sbjct: 147 GAEGVRIRCAGRLGG 161
>UniRef50_Q3ZZL8 Cluster: 30S ribosomal protein S3; n=18;
Bacteria|Rep: 30S ribosomal protein S3 - Dehalococcoides
sp. (strain CBDB1)
Length = 278
Score = 41.1 bits (92), Expect = 0.017
Identities = 27/125 (21%), Positives = 63/125 (50%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
+L + ++++ + S V++ + + + R V+G G+R+ E+ ++ ++
Sbjct: 38 KLRKAISKKYVDAAISQVDIERQSNKVTVSVRTARPGIVIGRGGQRVDEMRHFLE---DL 94
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
+ V+L +++ L A A S+ ++ +A RRA + M++GA+G ++ S
Sbjct: 95 IGKKVQLNIVEISQAELDAFLVARSVAEQIERRVAYRRAMKQAIFRSMQAGAKGIKICAS 154
Query: 433 GKLRG 447
G+L G
Sbjct: 155 GRLGG 159
>UniRef50_UPI00015BD7E8 Cluster: UPI00015BD7E8 related cluster; n=1;
unknown|Rep: UPI00015BD7E8 UniRef100 entry - unknown
Length = 231
Score = 40.3 bits (90), Expect = 0.030
Identities = 25/124 (20%), Positives = 62/124 (50%)
Frame = +1
Query: 76 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIP 255
+ +++ G S V + + + + I++++ ++G KG + +L + +++ +
Sbjct: 39 IRKYIKERYKSAGISKVTIERSGEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERI--VK 96
Query: 256 EQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSG 435
+ + L ++V L A AE + ++ ++ RRA + ++SGA+G +V V G
Sbjct: 97 NKDISLSVDEVRVPQLDAQLVAEDIALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKG 156
Query: 436 KLRG 447
++ G
Sbjct: 157 RIGG 160
>UniRef50_P46247 Cluster: 30S ribosomal protein S3; n=3;
Entomoplasmatales|Rep: 30S ribosomal protein S3 -
Mesoplasma florum (Acholeplasma florum)
Length = 241
Score = 40.3 bits (90), Expect = 0.030
Identities = 28/125 (22%), Positives = 56/125 (44%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ E + + L + S +++ T +II R VLG++G+ + + + VQK
Sbjct: 38 KIREGVLKLLKDAAVSKIKIERTNSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKD 97
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
VE+ +V A A + ++ + R +R +++G +G + VS
Sbjct: 98 RNLKVEVKVIEVKNPDADATLVARWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVS 157
Query: 433 GKLRG 447
G+L G
Sbjct: 158 GRLGG 162
>UniRef50_Q04G79 Cluster: 30S ribosomal protein S3; n=1; Oenococcus
oeni PSU-1|Rep: 30S ribosomal protein S3 - Oenococcus
oeni (strain BAA-331 / PSU-1)
Length = 267
Score = 39.9 bits (89), Expect = 0.040
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +1
Query: 76 LNEFLTRELAEDGYSGVEV-RVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQK---R 243
+ ++L L + + + R P R + I + V+G G + L S + K
Sbjct: 39 IRKYLETNLKDAAVDRITIERTEPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDT 98
Query: 244 FNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEV 423
+ + V + ++ L A + + L +A RRA G ++ + +GA+G
Sbjct: 99 YKGQHKRVNINIVEIRKPDLNAHLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRT 158
Query: 424 VVSGKLRG 447
+VSG+L G
Sbjct: 159 MVSGRLNG 166
>UniRef50_P56798 Cluster: Chloroplast 30S ribosomal protein S3;
n=78; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 218
Score = 39.5 bits (88), Expect = 0.053
Identities = 26/129 (20%), Positives = 61/129 (47%)
Frame = +1
Query: 109 DGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKV 288
+G + +E++ +III + ++ +K RR+ EL VQK N + + + ++
Sbjct: 58 EGIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRI 117
Query: 289 ATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMK 468
+ AE + +L ++ R+A + ++ +G +V ++G++ G+ ++
Sbjct: 118 SNPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVE 177
Query: 469 FCRWTHDPL 495
+ R PL
Sbjct: 178 WIREGRVPL 186
>UniRef50_Q3LWD3 Cluster: Ribosomal protein S3; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 262
Score = 39.1 bits (87), Expect = 0.069
Identities = 19/85 (22%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = +1
Query: 226 SVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKL-IGGLAVRRACYGVLRFIMES 402
+++ F I +++ + + + + Q+ ++ + R + LRF++ S
Sbjct: 112 NIISHLFFINSNKLKILYKNYKSSNISTMTQSSRMKEAFNYTNKSFRSIIFNTLRFLINS 171
Query: 403 GARGCEVVVSGKLRGQRAKSMKFCR 477
G RGC + + G R +R K+ KF R
Sbjct: 172 GVRGCMIKLKGVYRSKRTKTFKFRR 196
>UniRef50_Q9XD30 Cluster: 30S ribosomal protein S3; n=4;
Leptospira|Rep: 30S ribosomal protein S3 - Leptospira
interrogans
Length = 225
Score = 38.7 bits (86), Expect = 0.092
Identities = 27/125 (21%), Positives = 53/125 (42%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ +F+ G V + P + + + + V+G+KG I + +++ +
Sbjct: 37 KIRKFVQNRFNNAGVVKVVIERFPEKINVNLHTAKPGIVIGQKGANIEAVKKILKTMTDK 96
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
P + +K T C AES+ ++ RR LR M G G ++++S
Sbjct: 97 PVNLNIIEVKKPETVAQCI---AESIALQIEQRQPFRRVMKQELRRAMRGGVEGIKILIS 153
Query: 433 GKLRG 447
G+L G
Sbjct: 154 GRLNG 158
>UniRef50_Q11HQ8 Cluster: 30S ribosomal protein S3; n=167; cellular
organisms|Rep: 30S ribosomal protein S3 - Mesorhizobium
sp. (strain BNC1)
Length = 235
Score = 38.3 bits (85), Expect = 0.12
Identities = 32/141 (22%), Positives = 61/141 (43%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ ++ EL + S V + + + I + R ++G+KG I +L + + N
Sbjct: 38 KIRTYIENELKQAAISKVVIERPHKKCRVTIHSARPGLIIGKKGADIEKLRRKITQMTNA 97
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
L +V + A A+S+ +L +A RRA ++ M GA G + +
Sbjct: 98 ---ETHLNIVEVRKPEIDARLIAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCT 154
Query: 433 GKLRGQRAKSMKFCRWTHDPL 495
G+L G +++ R PL
Sbjct: 155 GRLGGAEIARIEWYREGRVPL 175
>UniRef50_Q20F10 Cluster: Chloroplast 30S ribosomal protein S3; n=2;
Chlorophyta|Rep: Chloroplast 30S ribosomal protein S3 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 235
Score = 38.3 bits (85), Expect = 0.12
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 11/135 (8%)
Frame = +1
Query: 124 VEVRVTPIRSEIIIMATRTQSVLGEKGR---RIRELTSVVQKRFN--------IPEQSVE 270
++ +V + E+ I TR ++G K + ++++L +Q N P V
Sbjct: 57 IQRKVDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVA 116
Query: 271 LYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQ 450
L V + AI AE L +L +A RRA VL I +G ++ VSG+L G
Sbjct: 117 LQVTTVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGA 176
Query: 451 RAKSMKFCRWTHDPL 495
++ R PL
Sbjct: 177 EIARSEWIRTGRVPL 191
>UniRef50_A0MNG0 Cluster: Putative uncharacterized protein; n=1;
Thermus phage phiYS40|Rep: Putative uncharacterized
protein - Thermus phage phiYS40
Length = 1014
Score = 37.5 bits (83), Expect = 0.21
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +1
Query: 49 VGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTS 228
+ + +FK+E FL+R L+E Y+ ++ RS I R L +K + E+
Sbjct: 224 ISERIFKSEREIFLSRTLSEF-YNESLNAISIARSNFIAQLNRVNESL-QKAQSPEEVAR 281
Query: 229 VVQKRFNIPEQSVELYAEKVATR 297
+ ++RFN + +LYAE++ R
Sbjct: 282 LQEERFNYLKSLTQLYAEELKIR 304
>UniRef50_A5AUQ8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 617
Score = 36.3 bits (80), Expect = 0.49
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Frame = +1
Query: 160 IIMATRTQSVLGEK-GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 336
+I TRT S+ + ++IREL SV Q +I + + A A RGL A+ ES+R
Sbjct: 101 VIRQTRTLSMTSAQFPKKIRELQSVTQSYVSIDATTKDKAAALAAARGLGRNAKIESVRL 160
Query: 337 KLIGGLAVRRACYGVLRFIMESGARG 414
++ L + +C G+ M + + G
Sbjct: 161 PMLTVLKL-HSCEGITSASMAAISHG 185
>UniRef50_Q52188 Cluster: TraC precursor; n=9; root|Rep: TraC
precursor - Enterococcus faecalis (Streptococcus
faecalis)
Length = 545
Score = 35.5 bits (78), Expect = 0.85
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +1
Query: 46 FVGDGVFKAELNEFLTRELAEDGYSGVEVRVTPIRSEIII 165
FVGDG F+ + EFL +L E+ G++V +TP+ + + +
Sbjct: 397 FVGDGEFEKKAGEFLQGQL-EENLEGLKVNITPVPANVFM 435
>UniRef50_Q9PQQ4 Cluster: 30S ribosomal protein S3; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S3 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 257
Score = 35.5 bits (78), Expect = 0.85
Identities = 27/125 (21%), Positives = 58/125 (46%)
Frame = +1
Query: 73 ELNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNI 252
++ ++L+ + G VE+ R + + A ++ ++G + + + + K
Sbjct: 39 KIRKYLSTKYKNAGIDHVEIERDQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVG- 97
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVS 432
+Q V L +V L A A + + ++ R A V++ ++++GARG + VS
Sbjct: 98 RKQLVSLKVVEVQIPELQASLMAREIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVS 157
Query: 433 GKLRG 447
G+L G
Sbjct: 158 GRLGG 162
>UniRef50_Q9U982 Cluster: Drosophila dodeca-satellite protein 1;
n=9; Endopterygota|Rep: Drosophila dodeca-satellite
protein 1 - Drosophila melanogaster (Fruit fly)
Length = 1301
Score = 34.7 bits (76), Expect = 1.5
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 139 TPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLC-AIA 315
T ++ + + +LG+ G+R+RE+ V R NIP QS E +E + G IA
Sbjct: 167 TQASRQVTVPREHFRVILGKGGQRLREIERVTATRINIPSQSDE--SEFITIAGTKEGIA 224
Query: 316 QAE 324
QAE
Sbjct: 225 QAE 227
>UniRef50_Q2GED3 Cluster: 30S ribosomal protein S3; n=1;
Neorickettsia sennetsu str. Miyayama|Rep: 30S ribosomal
protein S3 - Neorickettsia sennetsu (strain Miyayama)
Length = 211
Score = 34.7 bits (76), Expect = 1.5
Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 2/126 (1%)
Frame = +1
Query: 76 LNEFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFN-I 252
+ +++ A G S V ++ +I + + ++G+KG + + K+F +
Sbjct: 39 VTKYVESSFAHIGISKVIIKRKGASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFV 98
Query: 253 PEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIM-ESGARGCEVVV 429
P +V +V A+ A+S+ ++L + RR + +M ES +G +V
Sbjct: 99 PSLNV----VEVKKPNSSAVLVAKSIAFQLEKRSSFRRVIKKAIATVMRESDVKGVKVAC 154
Query: 430 SGKLRG 447
SG+L G
Sbjct: 155 SGRLSG 160
>UniRef50_UPI0000DA2268 Cluster: PREDICTED: hypothetical protein;
n=2; Rattus norvegicus|Rep: PREDICTED: hypothetical
protein - Rattus norvegicus
Length = 328
Score = 34.3 bits (75), Expect = 2.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 315 PGRISKIQAYRRSRCTSCLLWCSPFHH 395
PGR +A RRSRC+ C W HH
Sbjct: 240 PGRDWSAEASRRSRCSRCCTWSGDIHH 266
>UniRef50_A7R9B1 Cluster: Chromosome undetermined scaffold_3592,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_3592, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 207
Score = 34.3 bits (75), Expect = 2.0
Identities = 24/114 (21%), Positives = 52/114 (45%)
Frame = +1
Query: 154 EIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLR 333
++II + ++ K RRI EL VQK N + + + ++ AE +
Sbjct: 62 QVIIYMGFPKLLVEGKPRRIEELQMNVQKELNYVNRKLNIAITRITKPYGHPNILAEFIA 121
Query: 334 YKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFCRWTHDPL 495
+L ++ R+A + ++ +G +V ++G++ G+ +++ R PL
Sbjct: 122 GQLRNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPL 175
>UniRef50_Q8M9V0 Cluster: Chloroplast 30S ribosomal protein S3; n=1;
Chaetosphaeridium globosum|Rep: Chloroplast 30S
ribosomal protein S3 - Chaetosphaeridium globosum
Length = 255
Score = 33.1 bits (72), Expect = 4.6
Identities = 23/99 (23%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +1
Query: 202 GRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGV 381
G+ + ++ VQ+ + + KV+ A AE + +L +A RRA
Sbjct: 123 GQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMKQA 182
Query: 382 LRFIMESG-ARGCEVVVSGKLRGQRAKSMKFCRWTHDPL 495
++ E+G +G ++ +SG+L G +++ R PL
Sbjct: 183 IKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPL 221
>UniRef50_Q5CD89 Cluster: Outer membrane protein; n=8; Histophilus
somni|Rep: Outer membrane protein - Haemophilus somnus
(Histophilus somni)
Length = 384
Score = 32.7 bits (71), Expect = 6.0
Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Frame = -2
Query: 474 TKLH*FGTLTTQLARYNNFTTTGARFHDETENTIASTTYSETSDKLVS*RFGLGDSAKTT 295
TK+ G + L ++ + T R +D A + + RFGLGDS++
Sbjct: 28 TKVEVGGRVDVMLGKFGDAQRTDLRNNDSRVEFKAEHEVQNGLKAIGAVRFGLGDSSEED 87
Query: 294 SSH---LFSIQFYRLLWNVESLLYYGSQLTDSASF-LSEHTLCPGGHNN 160
SS S + L N + +G Q T + L++HT GG+NN
Sbjct: 88 SSFKEIKLSKLWLGLKHNDIGKVTFGKQNTTADDVQLNDHTYIFGGNNN 136
>UniRef50_Q5XIY2 Cluster: Transmembrane protein 56; n=8;
Euteleostomi|Rep: Transmembrane protein 56 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 264
Score = 32.7 bits (71), Expect = 6.0
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +1
Query: 370 CYGVLRFI-MESGARGCEVVVSGKLRGQRAKSMK 468
C +L I M ARGC V++GKL+G++A S K
Sbjct: 222 CLDILNIIWMYKIARGCYKVITGKLKGRKADSKK 255
>UniRef50_Q225J0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 281
Score = 32.3 bits (70), Expect = 8.0
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -3
Query: 296 RVATFSAYNSTDCSGMLNRFCTTEVSSRILRPFSPSTLCVL 174
R AT Y ++DC + +FC +++S I+ S +C+L
Sbjct: 58 REATTYCYTTSDCIRSIYQFCRSQISRHIINERENSQICLL 98
>UniRef50_P22367 Cluster: 6-methylsalicylic acid synthase; n=9;
Ascomycota|Rep: 6-methylsalicylic acid synthase -
Penicillium patulum (Penicillium griseofulvum)
Length = 1774
Score = 32.3 bits (70), Expect = 8.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 379 VLRFIMESGARGCEVVVSGKLRGQRAKSMKFCRWTHDPLWRPLQ 510
+L I + RG EV + ++ G+ A + W H P+WR ++
Sbjct: 868 ILHSIAQLHCRGAEVNWAAQMPGRWATGVPTTTWMHKPIWRKIE 911
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 586,077,421
Number of Sequences: 1657284
Number of extensions: 11599122
Number of successful extensions: 32859
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 31840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32820
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 37488397230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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