Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f05f
         (562 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.        24   3.0  
AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.      24   3.0  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   9.0  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   9.0  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   9.0  

>Y09952-1|CAA71083.1|  115|Anopheles gambiae histone H3 protein.
          Length = 115

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 285 GGYSWSLRYRPGRISKIQAYRRSRCTSCLLWCSPF 389
           GG     RYRPG ++  +  R  + T  L+   PF
Sbjct: 32  GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 66


>AY035716-1|AAK61362.1|  136|Anopheles gambiae histone 3A protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 3.0
 Identities = 12/35 (34%), Positives = 17/35 (48%)
 Frame = +3

Query: 285 GGYSWSLRYRPGRISKIQAYRRSRCTSCLLWCSPF 389
           GG     RYRPG ++  +  R  + T  L+   PF
Sbjct: 34  GGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPF 68


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  KFVGDGVFKAELNEFLTRELAEDG 114
           K VGD  F   +NEF  R  AE+G
Sbjct: 553 KMVGDYHFTCNVNEFAQR-YAEEG 575


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  KFVGDGVFKAELNEFLTRELAEDG 114
           K VGD  F   +NEF  R  AE+G
Sbjct: 553 KMVGDYHFTCNVNEFAQR-YAEEG 575


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 43  KFVGDGVFKAELNEFLTRELAEDG 114
           K VGD  F   +NEF  R  AE+G
Sbjct: 439 KMVGDYHFTCNVNEFAQR-YAEEG 461


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 611,177
Number of Sequences: 2352
Number of extensions: 12771
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52563375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)