Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f04f
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.68 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       22   4.8  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   6.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   8.4  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 502 LNKYDHFLTNIQGLDIHFVRVKPKADKMLRWYPFYF 609
           ++K+    TN+Q +DI+      K  K+++ + F+F
Sbjct: 106 VDKWRTLFTNLQYIDINLQNKGKKESKLMKNFYFWF 141


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -1

Query: 402 EALYLPLHETVVFKKRP 352
           + L+ P+H+TV++   P
Sbjct: 40  DKLHHPIHQTVIYHNNP 56


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 175 VVKALFTIYGIYLVYVSLTNVPDLPKVDVNLR 270
           + K  F ++G  L YVS      L ++D  L+
Sbjct: 2   IFKIHFLVFGALLTYVSSVEYLILREIDTILK 33


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 281 STPHRRLTSTLGKSGTFVSD 222
           STP + LTS + +   FV D
Sbjct: 603 STPFKELTSNVFRMNQFVYD 622


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,959
Number of Sequences: 336
Number of extensions: 2718
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)