Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f03r
(736 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-918|AAF46182.3| 231|Drosophila melanogaster CG3977-PA ... 188 5e-48
AY128493-1|AAM75086.1| 231|Drosophila melanogaster RH42635p pro... 186 4e-47
AE014297-4688|AAO41618.1| 238|Drosophila melanogaster CG15551-P... 115 8e-26
AY075311-1|AAL68178.1| 223|Drosophila melanogaster AT31946p pro... 111 9e-25
DQ459355-1|ABE69190.1| 166|Drosophila melanogaster Ctr1B protein. 105 6e-23
AY071033-1|AAL48655.1| 174|Drosophila melanogaster RE11491p pro... 105 6e-23
AE014297-737|AAF54223.1| 174|Drosophila melanogaster CG7459-PA ... 105 6e-23
AE014297-4689|AAF57103.1| 270|Drosophila melanogaster CG15551-P... 71 2e-12
AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p pro... 31 1.6
BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p pro... 30 2.8
AY051821-1|AAK93245.1| 1343|Drosophila melanogaster LD33044p pro... 30 2.8
AJ310804-1|CAC37791.1| 1343|Drosophila melanogaster Smad Anchor ... 30 2.8
AF239997-1|AAF64468.1| 1343|Drosophila melanogaster smad anchor ... 30 2.8
AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB ... 30 2.8
AE013599-3203|AAM70899.1| 1343|Drosophila melanogaster CG15667-P... 30 2.8
AE013599-3202|AAF46725.2| 1343|Drosophila melanogaster CG15667-P... 30 2.8
AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orp... 30 3.8
AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC... 30 3.8
AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA... 30 3.8
AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD... 30 3.8
AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB... 30 3.8
AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-P... 29 6.6
U07607-1|AAA19593.1| 894|Drosophila melanogaster Lola protein l... 29 8.7
AE013599-1116|AAO41425.2| 891|Drosophila melanogaster CG12052-P... 29 8.7
AE013599-1115|AAF58782.2| 891|Drosophila melanogaster CG12052-P... 29 8.7
AB107351-1|BAC67656.1| 894|Drosophila melanogaster Lola protein... 29 8.7
AB107331-1|BAC67636.1| 894|Drosophila melanogaster Lola protein... 29 8.7
AB107311-1|BAC67616.1| 894|Drosophila melanogaster Lola protein... 29 8.7
AB107291-1|BAC67596.1| 894|Drosophila melanogaster Lola protein... 29 8.7
>AE014298-918|AAF46182.3| 231|Drosophila melanogaster CG3977-PA
protein.
Length = 231
Score = 188 bits (459), Expect = 5e-48
Identities = 90/179 (50%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Frame = -2
Query: 690 HNVHTFSGHGDHSSHNMG--MSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLY 517
H H HG S M M M FH GY ETILFSWW++ V +GS AIF++AL+Y
Sbjct: 59 HAAHGAHNHGGGSGTGMEHMMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMY 118
Query: 516 EGLKYYRKHLLWKTYAGLQYCAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTA 337
EGLKYYR++L WKTY L+Y V P + + P+I P P+M+S
Sbjct: 119 EGLKYYREYLFWKTYNLLEYRPVTGPQRN------PEAPRIPSPAAAAPSPVQPSMLSIN 172
Query: 336 HAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLFGWRESVVVDFTEHCH 160
H QT+LH +QV +S++LML+FMTYN WLC VVLG+A GYFLF W++SV+VD TEHCH
Sbjct: 173 HLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTEHCH 231
>AY128493-1|AAM75086.1| 231|Drosophila melanogaster RH42635p
protein.
Length = 231
Score = 186 bits (452), Expect = 4e-47
Identities = 89/179 (49%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Frame = -2
Query: 690 HNVHTFSGHGDHSSHNMG--MSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLY 517
H H HG S M M M FH GY ETILFSWW++ V +GS AIF++AL+Y
Sbjct: 59 HAAHGAHNHGGGSGTGMEHMMPMAFHFGYNETILFSWWHIETVAGLIGSMIAIFLLALMY 118
Query: 516 EGLKYYRKHLLWKTYAGLQYCAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTA 337
EGLKYYR++L WKTY L+Y V P + + P+I P P+M+S
Sbjct: 119 EGLKYYREYLFWKTYNLLEYRPVTGPQRN------PEAPRIPSPAAAAPSPVQPSMLSIN 172
Query: 336 HAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLFGWRESVVVDFTEHCH 160
H QT+LH +QV +S++LML+FMTYN WLC VVLG+A GYFLF W++SV+VD TE+CH
Sbjct: 173 HLLQTLLHVLQVTLSFLLMLIFMTYNVWLCLMVVLGAAVGYFLFCWKKSVIVDVTENCH 231
>AE014297-4688|AAO41618.1| 238|Drosophila melanogaster CG15551-PB,
isoform B protein.
Length = 238
Score = 115 bits (276), Expect = 8e-26
Identities = 76/208 (36%), Positives = 107/208 (51%), Gaps = 24/208 (11%)
Frame = -2
Query: 711 HNTDMN---DHNVHTFSGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEVGEFVGSFFA 541
H+ +MN +H HT GH + +H+M M+M FH G ETILF +W S
Sbjct: 35 HSPEMNHHGNHGEHTKHGHHEGGAHDMSMAMFFHTGDSETILFKFWRTESAMALTLSCLL 94
Query: 540 IFIIALLYEGLKYYRKHLL-W--KTYAGLQYCAVAPPDKGVANIC--------AADEPQI 394
IF++A+LYE LK++R+ L W K AG + P AN ++
Sbjct: 95 IFMVAVLYEALKFFREWLFSWDRKRLAGGRDQYNRPRRYREANYNYNQPTYPPRTNQQSG 154
Query: 393 VQPIPHMLERNVP---------TMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTWLCAA 241
Q H ++ N P S H QT LH +QVL+S++LMLVFMT+N WLC A
Sbjct: 155 TQHTHHHVQENTPPAGRTTKLKVFCSGMHILQTFLHVLQVLISFLLMLVFMTFNVWLCVA 214
Query: 240 VVLGSATGYFLF-GWRESVVVDFTEHCH 160
V+LG+ GY++F +R +V EHC+
Sbjct: 215 VLLGAGVGYYIFCAFRTNV----QEHCN 238
>AY075311-1|AAL68178.1| 223|Drosophila melanogaster AT31946p
protein.
Length = 223
Score = 111 bits (267), Expect = 9e-25
Identities = 73/203 (35%), Positives = 102/203 (50%), Gaps = 21/203 (10%)
Frame = -2
Query: 705 TDMNDHNVHTFSGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIA 526
T +H HT GH + +H+M M+M FH G ETILF +W S IF++A
Sbjct: 25 THHGNHGEHTKHGHHEGGAHDMSMAMFFHTGDSETILFKFWRTESAMALTLSCLLIFMVA 84
Query: 525 LLYEGLKYYRKHLL-W--KTYAGLQYCAVAPPDKGVANIC--------AADEPQIVQPIP 379
+LYE LK++R+ L W K G + P AN ++ Q
Sbjct: 85 VLYEALKFFREWLFSWDRKRLEGGRDQYNRPRRYREANYNYNQPTYPPRTNQQSGTQHTH 144
Query: 378 HMLERNVP---------TMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGS 226
H ++ N P S H QT LH +QVL+S++LMLVFMT+N WLC AV+LG+
Sbjct: 145 HHVQENTPPAGRTTKLKVFCSGMHILQTFLHVLQVLISFLLMLVFMTFNVWLCVAVLLGA 204
Query: 225 ATGYFLF-GWRESVVVDFTEHCH 160
GY++F +R +V EHC+
Sbjct: 205 GVGYYIFCAFRTNV----QEHCN 223
>DQ459355-1|ABE69190.1| 166|Drosophila melanogaster Ctr1B protein.
Length = 166
Score = 105 bits (252), Expect = 6e-23
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = -2
Query: 636 MSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTY--AGL 463
M M FH G+ E IL+ W + V EFV S AIF+++ LYE LK+ R+ L + A
Sbjct: 9 MIMVFHAGHCERILWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASE 68
Query: 462 QYCAVA--PPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSY 289
Q A + A C ++ P + +P + + +++H Q++L+ +Q+++SY
Sbjct: 69 QLAAEQRRKNEAPAAGGCCSEAP-LAEPREQTYWQR---LFASSHIVQSLLNLLQIVISY 124
Query: 288 MLMLVFMTYNTWLCAAVVLGSATGYFLFGWRE 193
+LML+FMT+N WLC AV+LG GYF FGW +
Sbjct: 125 LLMLIFMTFNYWLCLAVILGLGLGYFFFGWNK 156
>AY071033-1|AAL48655.1| 174|Drosophila melanogaster RE11491p
protein.
Length = 174
Score = 105 bits (252), Expect = 6e-23
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = -2
Query: 636 MSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTY--AGL 463
M M FH G+ E IL+ W + V EFV S AIF+++ LYE LK+ R+ L + A
Sbjct: 17 MIMVFHAGHCERILWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASE 76
Query: 462 QYCAVA--PPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSY 289
Q A + A C ++ P + +P + + +++H Q++L+ +Q+++SY
Sbjct: 77 QLAAEQRRKNEAPAAGGCCSEAP-LAEPREQTYWQR---LFASSHIVQSLLNLLQIVISY 132
Query: 288 MLMLVFMTYNTWLCAAVVLGSATGYFLFGWRE 193
+LML+FMT+N WLC AV+LG GYF FGW +
Sbjct: 133 LLMLIFMTFNYWLCLAVILGLGLGYFFFGWNK 164
>AE014297-737|AAF54223.1| 174|Drosophila melanogaster CG7459-PA
protein.
Length = 174
Score = 105 bits (252), Expect = 6e-23
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 4/152 (2%)
Frame = -2
Query: 636 MSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTY--AGL 463
M M FH G+ E IL+ W + V EFV S AIF+++ LYE LK+ R+ L + A
Sbjct: 17 MIMVFHAGHCERILWRGWVASTVTEFVLSALAIFLVSFLYEALKFLRQQLARREARRASE 76
Query: 462 QYCAVA--PPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSY 289
Q A + A C ++ P + +P + + +++H Q++L+ +Q+++SY
Sbjct: 77 QLAAEQRRKNEAPAAGGCCSEAP-LAEPREQTYWQR---LFASSHIVQSLLNLLQIVISY 132
Query: 288 MLMLVFMTYNTWLCAAVVLGSATGYFLFGWRE 193
+LML+FMT+N WLC AV+LG GYF FGW +
Sbjct: 133 LLMLIFMTFNYWLCLAVILGLGLGYFFFGWNK 164
>AE014297-4689|AAF57103.1| 270|Drosophila melanogaster CG15551-PA,
isoform A protein.
Length = 270
Score = 70.5 bits (165), Expect = 2e-12
Identities = 33/63 (52%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = -2
Query: 345 STAHAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLF-GWRESVVVDFTE 169
S H QT LH +QVL+S++LMLVFMT+N WLC AV+LG+ GY++F +R +V E
Sbjct: 212 SGMHILQTFLHVLQVLISFLLMLVFMTFNVWLCVAVLLGAGVGYYIFCAFRTNV----QE 267
Query: 168 HCH 160
HC+
Sbjct: 268 HCN 270
Score = 67.3 bits (157), Expect = 2e-11
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 3/78 (3%)
Frame = -2
Query: 711 HNTDMN---DHNVHTFSGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEVGEFVGSFFA 541
H+ +MN +H HT GH + +H+M M+M FH G ETILF +W S
Sbjct: 35 HSPEMNHHGNHGEHTKHGHHEGGAHDMSMAMFFHTGDSETILFKFWRTESAMALTLSCLL 94
Query: 540 IFIIALLYEGLKYYRKHL 487
IF++A+LYE LK++R+ L
Sbjct: 95 IFMVAVLYEALKFFREWL 112
>AY122262-1|AAM52774.1| 1544|Drosophila melanogaster SD13096p protein.
Length = 1544
Score = 31.1 bits (67), Expect = 1.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -2
Query: 711 HNTDMNDHNVHTFSGHGDHSSHNMGMSMTFHGG 613
HN + N H+ H H +HS H +G+ GG
Sbjct: 1429 HNHNHNHHHHHHHHSHHNHSQHGIGIGSASIGG 1461
>BT015257-1|AAT94486.1| 988|Drosophila melanogaster LP04173p
protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = -2
Query: 540 IFIIALLYEGLKYYRKH--LLWKTYAGLQYCAVAPPDKGVANICAADEPQIVQPIPHMLE 367
+F + +KY + +LW Y+ +YC + I A D P+++ PI +L
Sbjct: 23 LFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPIYAPDMPRVL-PIKDVLV 81
Query: 366 RNVPTMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTW 253
+ ++ A W LH V +++ ++ Y T+
Sbjct: 82 GLMSAVLEGARCW---LHYTLVGLAWFGVVPLSAYRTY 116
>AY051821-1|AAK93245.1| 1343|Drosophila melanogaster LD33044p
protein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 465 LQYCAVAPPDKGVANICAADEPQIVQPI 382
++YC+ PP + VAN A P ++ P+
Sbjct: 621 MEYCSTIPPHRQVANSPGAPPPSVIVPV 648
>AJ310804-1|CAC37791.1| 1343|Drosophila melanogaster Smad Anchor for
Receptor Activationprotein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 465 LQYCAVAPPDKGVANICAADEPQIVQPI 382
++YC+ PP + VAN A P ++ P+
Sbjct: 621 MEYCSTIPPHRQVANSPGAPPPSVIVPV 648
>AF239997-1|AAF64468.1| 1343|Drosophila melanogaster smad anchor for
receptor activationprotein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 465 LQYCAVAPPDKGVANICAADEPQIVQPI 382
++YC+ PP + VAN A P ++ P+
Sbjct: 621 MEYCSTIPPHRQVANSPGAPPPSVIVPV 648
>AE014296-443|AAF47637.2| 988|Drosophila melanogaster CG1317-PB
protein.
Length = 988
Score = 30.3 bits (65), Expect = 2.8
Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 2/98 (2%)
Frame = -2
Query: 540 IFIIALLYEGLKYYRKH--LLWKTYAGLQYCAVAPPDKGVANICAADEPQIVQPIPHMLE 367
+F + +KY + +LW Y+ +YC + I A D P+++ PI +L
Sbjct: 23 LFYPCICTGSIKYIHQDCLMLWMRYSHKEYCELCSYSFSFQPIYAPDMPRVL-PIKDVLV 81
Query: 366 RNVPTMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTW 253
+ ++ A W LH V +++ ++ Y T+
Sbjct: 82 GLMSAVLEGARCW---LHYTLVGLAWFGVVPLSAYRTY 116
>AE013599-3203|AAM70899.1| 1343|Drosophila melanogaster CG15667-PB,
isoform B protein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 465 LQYCAVAPPDKGVANICAADEPQIVQPI 382
++YC+ PP + VAN A P ++ P+
Sbjct: 621 MEYCSTIPPHRQVANSPGAPPPSVIVPV 648
>AE013599-3202|AAF46725.2| 1343|Drosophila melanogaster CG15667-PA,
isoform A protein.
Length = 1343
Score = 30.3 bits (65), Expect = 2.8
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 465 LQYCAVAPPDKGVANICAADEPQIVQPI 382
++YC+ PP + VAN A P ++ P+
Sbjct: 621 MEYCSTIPPHRQVANSPGAPPPSVIVPV 648
>AJ243264-1|CAB53640.1| 1035|Drosophila melanogaster putative orphan
neurotransmittertransporter protein.
Length = 1035
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 379 RNWLYNLWFICCTNIGNSLVWWC 447
R W++ LW IC + LVWWC
Sbjct: 638 RVWMW-LWVICPAILTGILVWWC 659
>AE014296-2901|AAN11709.1| 809|Drosophila melanogaster CG3897-PC,
isoform C protein.
Length = 809
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 379 RNWLYNLWFICCTNIGNSLVWWC 447
R W++ LW IC + LVWWC
Sbjct: 471 RVWMW-LWVICPAILTGILVWWC 492
>AE014296-2900|AAF49348.2| 769|Drosophila melanogaster CG3897-PA,
isoform A protein.
Length = 769
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 379 RNWLYNLWFICCTNIGNSLVWWC 447
R W++ LW IC + LVWWC
Sbjct: 431 RVWMW-LWVICPAILTGILVWWC 452
>AE014296-2899|AAN11708.1| 976|Drosophila melanogaster CG3897-PD,
isoform D protein.
Length = 976
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 379 RNWLYNLWFICCTNIGNSLVWWC 447
R W++ LW IC + LVWWC
Sbjct: 638 RVWMW-LWVICPAILTGILVWWC 659
>AE014296-2898|AAN11707.1| 976|Drosophila melanogaster CG3897-PB,
isoform B protein.
Length = 976
Score = 29.9 bits (64), Expect = 3.8
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +1
Query: 379 RNWLYNLWFICCTNIGNSLVWWC 447
R W++ LW IC + LVWWC
Sbjct: 638 RVWMW-LWVICPAILTGILVWWC 659
>AE014134-2941|AAF53675.2| 1365|Drosophila melanogaster CG10231-PA
protein.
Length = 1365
Score = 29.1 bits (62), Expect = 6.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -2
Query: 711 HNTDMNDHNVHTFSGHGDHSSHNMGMSMTFHGG 613
H+ + N H+ H H +HS H +G+ GG
Sbjct: 1250 HSHNHNHHHHHHHHSHHNHSQHGIGIGSASIGG 1282
>U07607-1|AAA19593.1| 894|Drosophila melanogaster Lola protein long
isoform protein.
Length = 894
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 806 KSTLRRHENVECGGKEPSHQCPYCPY 831
>AE013599-1116|AAO41425.2| 891|Drosophila melanogaster CG12052-PR,
isoform R protein.
Length = 891
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 803 KSTLRRHENVECGGKEPSHQCPYCPY 828
>AE013599-1115|AAF58782.2| 891|Drosophila melanogaster CG12052-PG,
isoform G protein.
Length = 891
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 803 KSTLRRHENVECGGKEPSHQCPYCPY 828
>AB107351-1|BAC67656.1| 894|Drosophila melanogaster Lola protein
isoform T protein.
Length = 894
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 806 KSTLRRHENVECGGKEPSHQCPYCPY 831
>AB107331-1|BAC67636.1| 894|Drosophila melanogaster Lola protein
isoform T protein.
Length = 894
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 806 KSTLRRHENVECGGKEPSHQCPYCPY 831
>AB107311-1|BAC67616.1| 894|Drosophila melanogaster Lola protein
isoform T protein.
Length = 894
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 806 KSTLRRHENVECGGKEPSHQCPYCPY 831
>AB107291-1|BAC67596.1| 894|Drosophila melanogaster Lola protein
isoform T protein.
Length = 894
Score = 28.7 bits (61), Expect = 8.7
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +3
Query: 579 RSTKRR-E*FQCSHRETSWTCPYCGY 653
+ST RR E +C +E S CPYC Y
Sbjct: 806 KSTLRRHENVECGGKEPSHQCPYCPY 831
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,613,303
Number of Sequences: 53049
Number of extensions: 805898
Number of successful extensions: 2549
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 2403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2540
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -