Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f03f
         (608 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.7  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   4.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.1  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.1  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 266 HGVHAQHGPYP 234
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 266 HGVHAQHGPYP 234
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 266 HGVHAQHGPYP 234
           +G H+QHG YP
Sbjct: 8   YGHHSQHGTYP 18


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +3

Query: 180 SAPT*PRTRWTNIMNTTIWIWAMLGMNTM 266
           S+PT     +TN  N++IW  A +   T+
Sbjct: 201 SSPTIASATYTNSANSSIWSPASIDSFTL 229


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.1
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 515 IFIIALLYEGLKYYRKHLLWKTYAGLQYCA 604
           IFII ++ +  +    HLL+    G+ Y A
Sbjct: 615 IFIICVIVQSEQIAWLHLLYIFLVGIMYAA 644


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 515 IFIIALLYEGLKYYRKHLLWKTYAGLQYCA 604
           IF+I +L +  K    HL++ ++ G+  CA
Sbjct: 259 IFVICVLVQSEKIVWLHLVYISFLGI-ICA 287


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,965
Number of Sequences: 336
Number of extensions: 3905
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)