Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f02r
         (821 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.      29   0.17 
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        24   6.5  

>AY973196-1|AAY41590.1|   94|Anopheles gambiae defensin 4 protein.
          Length = 94

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = -1

Query: 662 CNIRGCDQSCRRIGFPGGVCVNGRCKCDII 573
           C    C   CR  G+  G C  GRC C  +
Sbjct: 65  CTNPTCSAQCRGRGYRRGSCTIGRCFCSYV 94



 Score = 25.8 bits (54), Expect = 1.6
 Identities = 10/41 (24%), Positives = 14/41 (34%)
 Frame = -1

Query: 575 IATQFLGKFIRNLKCNTVECNEICHRLNYAGGICKGNECSC 453
           +  Q     ++ L C    C+  C    Y  G C    C C
Sbjct: 51  LVAQSRSAMVQTLTCTNPTCSAQCRGRGYRRGSCTIGRCFC 91


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 511 SLHSTVLHFKFLINFPRNCVAIISHLHRPLTHTPPGNP 624
           +L  ++LH     + P+ C A  S  H  + H  P NP
Sbjct: 77  ALLQSLLHEHIKYDVPKPCCAPSSLDHIDVLHADPKNP 114


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,261
Number of Sequences: 2352
Number of extensions: 17528
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)