Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f02r
         (821 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft ...    33   0.47 
AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD2272...    33   0.47 
AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA...    33   0.47 
AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB...    33   0.47 
X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II transm...    32   1.1  
AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-P...    32   1.1  
BT022088-1|AAY33504.1|  787|Drosophila melanogaster RE03647p pro...    29   7.7  
BT010028-1|AAQ22497.1|  787|Drosophila melanogaster RE03551p pro...    29   7.7  
AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein...    29   7.7  
AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT prot...    29   7.7  
AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA...    29   7.7  

>U09306-1|AAB60255.1| 1106|Drosophila melanogaster shuttle craft
           protein protein.
          Length = 1106

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 662 CNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKC---NTVECNEICHRLN 492
           C I GC  +C  +  P G C    C+ +++ +   G+  + ++C     V C EIC +L 
Sbjct: 469 CRIEGCSHACTLLCHP-GPC--PPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLL 525

Query: 491 YAG 483
             G
Sbjct: 526 NCG 528


>AF145679-1|AAD38654.1| 1106|Drosophila melanogaster BcDNA.LD22726
           protein.
          Length = 1106

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 662 CNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKC---NTVECNEICHRLN 492
           C I GC  +C  +  P G C    C+ +++ +   G+  + ++C     V C EIC +L 
Sbjct: 469 CRIEGCSHACTLLCHP-GPC--PPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLL 525

Query: 491 YAG 483
             G
Sbjct: 526 NCG 528


>AE014134-2570|AAN10891.1| 1099|Drosophila melanogaster CG3647-PA,
           isoform A protein.
          Length = 1099

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 662 CNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKC---NTVECNEICHRLN 492
           C I GC  +C  +  P G C    C+ +++ +   G+  + ++C     V C EIC +L 
Sbjct: 462 CRIEGCSHACTLLCHP-GPC--PPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLL 518

Query: 491 YAG 483
             G
Sbjct: 519 NCG 521


>AE014134-2569|AAF53441.2| 1106|Drosophila melanogaster CG3647-PB,
           isoform B protein.
          Length = 1106

 Score = 33.1 bits (72), Expect = 0.47
 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 662 CNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKC---NTVECNEICHRLN 492
           C I GC  +C  +  P G C    C+ +++ +   G+  + ++C     V C EIC +L 
Sbjct: 469 CRIEGCSHACTLLCHP-GPC--PPCQANVVRSCGCGRSTKTMQCAMKEEVLCGEICDKLL 525

Query: 491 YAG 483
             G
Sbjct: 526 NCG 528


>X68794-1|CAA48691.2| 3004|Drosophila melanogaster type II
           transmembrane protein protein.
          Length = 3004

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = -1

Query: 665 DCNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKCNTVECNEICHRLNYA 486
           DC+   C   C R     GVC +G+C+C+   + + G     L C++  C+E  H     
Sbjct: 720 DCSQAVCSLDCGR----NGVCESGKCRCN---SGWTGNLCDQLPCDS-RCSE--H----- 764

Query: 485 GGICKGNECSC 453
            G CK   C C
Sbjct: 765 -GQCKNGTCVC 774


>AE014298-1757|AAF48154.2| 3004|Drosophila melanogaster CG32659-PA
           protein.
          Length = 3004

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 22/71 (30%), Positives = 32/71 (45%)
 Frame = -1

Query: 665 DCNIRGCDQSCRRIGFPGGVCVNGRCKCDIIATQFLGKFIRNLKCNTVECNEICHRLNYA 486
           DC+   C   C R     GVC +G+C+C+   + + G     L C++  C+E  H     
Sbjct: 720 DCSQAVCSLDCGR----NGVCESGKCRCN---SGWTGNLCDQLPCDS-RCSE--H----- 764

Query: 485 GGICKGNECSC 453
            G CK   C C
Sbjct: 765 -GQCKNGTCVC 774


>BT022088-1|AAY33504.1|  787|Drosophila melanogaster RE03647p
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 821 RSISXKDVIAEDAISRVAELDFXR 750
           +S+S +DVI   A+ RV+ +DF R
Sbjct: 285 KSVSDRDVICHQALERVSSIDFDR 308


>BT010028-1|AAQ22497.1|  787|Drosophila melanogaster RE03551p
           protein.
          Length = 787

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 821 RSISXKDVIAEDAISRVAELDFXR 750
           +S+S +DVI   A+ RV+ +DF R
Sbjct: 285 KSVSDRDVICHQALERVSSIDFDR 308


>AF279586-1|AAF82381.1| 1384|Drosophila melanogaster TIM2 protein
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 821 RSISXKDVIAEDAISRVAELDFXR 750
           +S+S +DVI   A+ RV+ +DF R
Sbjct: 285 KSVSDRDVICHQALERVSSIDFDR 308


>AF268472-1|AAF73481.1| 1384|Drosophila melanogaster TIMEOUT
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 821 RSISXKDVIAEDAISRVAELDFXR 750
           +S+S +DVI   A+ RV+ +DF R
Sbjct: 285 KSVSDRDVICHQALERVSSIDFDR 308


>AE014297-1632|AAF54908.3| 1384|Drosophila melanogaster CG7855-PA
           protein.
          Length = 1384

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 11/24 (45%), Positives = 17/24 (70%)
 Frame = -1

Query: 821 RSISXKDVIAEDAISRVAELDFXR 750
           +S+S +DVI   A+ RV+ +DF R
Sbjct: 285 KSVSDRDVICHQALERVSSIDFDR 308


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,522,485
Number of Sequences: 53049
Number of extensions: 742425
Number of successful extensions: 1757
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1757
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)