Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11f02f
         (713 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    24   1.1  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    23   2.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.3  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   5.7  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.5  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   7.5  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    21   7.5  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/36 (27%), Positives = 16/36 (44%)
 Frame = +3

Query: 489 GVCVNGRCKCDIIANNNIADLDGDRSSLKDCNSRGC 596
           G+  NG   C   ++ N  D+D D +    C+   C
Sbjct: 133 GLFCNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVC 168


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +2

Query: 65  ECFVHYTCISD 97
           +C V+YTC+SD
Sbjct: 454 DCSVYYTCVSD 464


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 388 FPHSHCPPIQIPPENPNLRHN 326
           +P+   PP  IP +NP L  N
Sbjct: 179 YPNFGVPPAGIPLQNPGLNLN 199


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 13/51 (25%), Positives = 20/51 (39%)
 Frame = +3

Query: 192 ELGFPSGACDGEQCVCDNFLKTRGSRTKTDNQLPQLDCTTSECDQLCRRFG 344
           +LG P G     +C C    K R    +   +  + +C    CD+   R G
Sbjct: 52  DLGVPIGVLYCMKCECVPLQKKRRIVARVQCRSIKNECPEPTCDEPVHRPG 102


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 396  KNADLNENQSTLENCDMRECD 458
            KN  +NE+   +   D ++CD
Sbjct: 1386 KNLQVNESGKLIHKIDAQDCD 1406


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -2

Query: 670 GYNVALHRPLTHTPPGNPILRHD*SHPRLLQSLREDRSPSRSAI 539
           G++ + + PLTH    NP   H       L  L   ++ S+S I
Sbjct: 329 GHSTSPNLPLTHNIAHNPYPSHSIYPSSNLMPLNNIQNLSQSGI 372


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = -3

Query: 639 RTHRQEIQFCDTTDRILGY 583
           R+H +    CD+ +RI G+
Sbjct: 518 RSHDKLCDVCDSVNRIFGF 536


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 244 LSQTHCSPSHAPLGNPSSRQSWS 176
           + QTH SPSH+   + SS +  S
Sbjct: 244 IRQTHKSPSHSVDNSNSSEKKSS 266


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,483
Number of Sequences: 336
Number of extensions: 4153
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)