Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f02f
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 25 0.54
U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor prot... 25 0.94
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 25 0.94
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 5.0
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 22 6.6
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 22 6.6
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 22 6.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 22 6.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.8
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.8
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 25.4 bits (53), Expect = 0.54
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 168 TACDQLCRELGFPSGACDGEQCVC 239
+AC C LG G C+ C+C
Sbjct: 33 SACAANCHSLGKAGGHCEKGVCIC 56
Score = 25.4 bits (53), Expect = 0.54
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 453 CDQSCRRIGFPGGVCVNGRCKC 518
C +C +G GG C G C C
Sbjct: 35 CAANCHSLGKAGGHCEKGVCIC 56
Score = 25.0 bits (52), Expect = 0.71
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 582 NSRGCDQSCRRIGFPGGVCVNGRC 653
N C +C +G GG C G C
Sbjct: 31 NDSACAANCHSLGKAGGHCEKGVC 54
>U15955-1|AAA67443.1| 95|Apis mellifera defensin precursor
protein.
Length = 95
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 168 TACDQLCRELGFPSGACDGEQCVC 239
+AC C LG G C+ C+C
Sbjct: 58 SACAANCLSLGKAGGHCEKVGCIC 81
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 453 CDQSCRRIGFPGGVCVNGRCKC 518
C +C +G GG C C C
Sbjct: 60 CAANCLSLGKAGGHCEKVGCIC 81
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 168 TACDQLCRELGFPSGACDGEQCVC 239
+AC C LG G C+ C+C
Sbjct: 58 SACAANCLSLGKAGGHCEKGVCIC 81
Score = 24.6 bits (51), Expect = 0.94
Identities = 9/22 (40%), Positives = 11/22 (50%)
Frame = +3
Query: 453 CDQSCRRIGFPGGVCVNGRCKC 518
C +C +G GG C G C C
Sbjct: 60 CAANCLSLGKAGGHCEKGVCIC 81
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +3
Query: 582 NSRGCDQSCRRIGFPGGVCVNGRC 653
N C +C +G GG C G C
Sbjct: 56 NDSACAANCLSLGKAGGHCEKGVC 79
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 5.0
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = -2
Query: 586 LLQSLREDRSPSRSAIL--LLAIMSHLHRPLTHTPP 485
+++ L D + + S + L A +SH R + H PP
Sbjct: 671 MIEHLSPDHNGNYSCVARNLAAEVSHTQRLVVHVPP 706
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.8 bits (44), Expect = 6.6
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +1
Query: 151 CVTVTLRLVTSSAVNLGFQVARAMVNNAFAIISSKHV 261
C+ + + VTS+AVN + A + ++ I KH+
Sbjct: 10 CLGIACQDVTSAAVNHQRKSANNLAHSMKVIYEWKHI 46
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 605 VSQNWISWRCVRQRTMQCDIIAN 673
+S WI++ C+ DI+ N
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVN 139
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 605 VSQNWISWRCVRQRTMQCDIIAN 673
+S WI++ C+ DI+ N
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVN 139
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 21.8 bits (44), Expect = 6.6
Identities = 7/23 (30%), Positives = 12/23 (52%)
Frame = +2
Query: 605 VSQNWISWRCVRQRTMQCDIIAN 673
+S WI++ C+ DI+ N
Sbjct: 117 LSTRWIAFNCLSDTIFLIDIVVN 139
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 223 PSHAPLGNPSSRQSWSQAVKSQLRN 149
P H GNP +Q ++ + Q N
Sbjct: 105 PQHVVYGNPQQQQLAAETQQQQQHN 129
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.4 bits (43), Expect = 8.8
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +3
Query: 216 CDGEQCVCDNFLKTRGS 266
CDG+ +CD T+G+
Sbjct: 493 CDGKPGLCDAMKPTKGT 509
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,339
Number of Sequences: 438
Number of extensions: 4603
Number of successful extensions: 30
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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