Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11f01f
(616 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0) 50 1e-06
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 50 1e-06
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 48 8e-06
SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08) 44 1e-04
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 43 2e-04
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012) 42 4e-04
SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23) 42 5e-04
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 7e-04
SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12) 41 0.001
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 41 0.001
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 40 0.002
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_17112| Best HMM Match : Trypsin (HMM E-Value=0) 39 0.004
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.005
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.009
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.011
SB_33589| Best HMM Match : Trypsin (HMM E-Value=0) 37 0.015
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.020
SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.020
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.020
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.026
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 36 0.026
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 36 0.034
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.034
SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.046
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.060
SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08) 34 0.080
SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21) 34 0.080
SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.14
SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2) 33 0.14
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 33 0.18
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.18
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08) 32 0.32
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 31 0.56
SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 29 2.3
SB_32032| Best HMM Match : PAN (HMM E-Value=0.029) 29 3.0
SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_17803| Best HMM Match : SRCR (HMM E-Value=0) 28 5.2
SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 6.9
SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_2152| Best HMM Match : EGF (HMM E-Value=0) 27 9.1
>SB_37295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 620
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 3/101 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+R++GG A GA P IAL + ICG SL+++T VTAAHC R + Q+
Sbjct: 475 SRVIGGKDAIPGAWPWQ----IALKSRGNFICGGSLVSSTWVVTAAHC-VARSSNPAQYQ 529
Query: 361 LALGTANIFSGGTRVTTSNVQ---MHGSYNMDTLHNDVAII 474
+ +G N T NV+ H YN L ND+A+I
Sbjct: 530 IIVGEHNRNVNEVTEETLNVKKVIAHPQYNNPRLSNDIALI 570
>SB_37142| Best HMM Match : Peptidase_A22B (HMM E-Value=0)
Length = 1019
Score = 50.4 bits (115), Expect = 1e-06
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+RIVGG+AAN G P A L T G CG SL+ + +TAAHC ++R +
Sbjct: 389 SRIVGGAAANPGDWPWQAQL--RTTTG-FPYCGGSLIHSNWVLTAAHCISSKR--PAEVV 443
Query: 361 LALGTANIFSGGTR----VTTSNVQMHGSYNMDTLHNDVAII 474
+ LG + T + S + H +YN T++ND+A++
Sbjct: 444 VRLGAHSRLGSLTTDMQDIKVSAIITHSNYNSRTMYNDIALL 485
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 50.0 bits (114), Expect = 1e-06
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 7/125 (5%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQF 357
+RIVGG+ A G P A L+ G CG +L+ VTA+HC R + +
Sbjct: 209 SRIVGGNDAMHGEWPWQAMLMFQTPLGYKQFCGGALVHEDWVVTASHCINDIRPEDYKTH 268
Query: 358 TLALGTAN---IFSGGTRVTTSNVQMHGSYNM--DTLHNDVAIINHNHVGF-TNNIQRIN 519
++LG N I S R+ + + +H YN+ +NDVA+I T +Q +
Sbjct: 269 IISLGGHNKTGIMSVEQRIGIAKIYLHADYNLYPHQYNNDVALIRLAKPAIRTRYVQPVC 328
Query: 520 LASGS 534
LA G+
Sbjct: 329 LADGT 333
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 47.6 bits (108), Expect = 8e-06
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTL 363
RIV G A PH ++ + ICGASLLT ++TAAHC T A +TL
Sbjct: 240 RIVNGE----DAVPHSWPWQLSFRYKGSHICGASLLTPGWALTAAHC-LTLSDDASDYTL 294
Query: 364 ALGTANIFSGGTRVTTSNVQMHGSYNMDTLHNDVAIIN-HNHVGFTNNIQRINLAS 528
G + G S ++ H ++M + NDVA++ +V ++ + I L S
Sbjct: 295 VAGAHQRENDGQVFGISKIRKHKGFSMVHVRNDVALLKLSTYVQLSDKVGTICLPS 350
>SB_11235| Best HMM Match : Trypsin (HMM E-Value=1.1e-08)
Length = 235
Score = 44.0 bits (99), Expect = 1e-04
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
GTRI+ G A + P L + ++ CGASLL+ ++TAAHC + R + +
Sbjct: 83 GTRIINGEEAVPNSWPWQLSLRVYGSHN----CGASLLSPGWALTAAHCVQ-RSSNPADY 137
Query: 358 TLALGT-ANIFSGGTRV-TTSNVQMHGSYNMDTLHNDVAII 474
TLA G + +V S V H ++M L NDV ++
Sbjct: 138 TLAAGAHRRVNDAHAQVLRVSQVISHKEFSMGHLRNDVTLL 178
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 43.6 bits (98), Expect = 1e-04
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 6/147 (4%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+R+V G A + P L + NGR ICG SL+ VTAAHC R +T
Sbjct: 30 SRVVNGDNAQQHSWPWQISLRV---NGR-HICGGSLIAKDWVVTAAHC-VDRNPTPSGYT 84
Query: 361 LALGTANIFSGGTRVTTS----NVQMHGSYNMDTLHNDVAIIN-HNHVGFTNNIQRINL- 522
+ +G A+ +G T V + + H ++M L ND+A++ H V ++ + + L
Sbjct: 85 VVVG-AHHRTGNTPVQNTFRLKQLFKHEQFSMRHLKNDIALLQLHEPVKASDKVNTVCLP 143
Query: 523 ASGSNNXXXXXXXXXXXXRTSDAASGA 603
+SGS RT S A
Sbjct: 144 SSGSRAQAGARCYITGWGRTVGGGSAA 170
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 6/104 (5%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGL--VIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQ 354
TRIVGG+ A GA P + V ICG S++ VTAAHC+ + A+
Sbjct: 102 TRIVGGTRAKKGAWPWQISMNYVHNKVTKTPHICGGSVVAPEWIVTAAHCFAYSK-DAKD 160
Query: 355 FTLALG--TANIFSG-GTRVTTSNVQMHGSYNMDTLHN-DVAII 474
+T+A+G N G R + +H Y H+ DVA+I
Sbjct: 161 YTIAVGEHDLNATDGYEQRPDVERIILHPKYAPHNNHDYDVALI 204
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/123 (30%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+RIVGGS A GA P V+ + N CG +L+T +TAAHC + + Q
Sbjct: 629 SRIVGGSTAPPGAWPWQ---VMLIYNSGRQFCGGTLVTPEWVITAAHCVVDKNPASIQVR 685
Query: 361 LAL--GTANIFSGGTRVTTSNVQMHGSY-NMDTLHNDVAIINHNHVGFTNNIQRINLASG 531
L T+ S R++ ++ H Y + ND+A++ + T RINLA
Sbjct: 686 LGAQDRTSPDPSVEMRISIRSIHNHPDYGSPKRSSNDIALLRLSRP--TILTHRINLACM 743
Query: 532 SNN 540
N+
Sbjct: 744 PND 746
>SB_33775| Best HMM Match : Trypsin (HMM E-Value=0.012)
Length = 115
Score = 41.9 bits (94), Expect = 4e-04
Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 4/102 (3%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
TRIVGG+AA G P A L T CG SL+ +TA HC R QA
Sbjct: 9 TRIVGGTAAKHGDWPWQAQL---RTTSGFPYCGGSLIAPQWILTATHC--VERKQASSIV 63
Query: 361 LALGT-ANIFSGGTR--VTTSNVQMHGSYNM-DTLHNDVAII 474
+ LG + + GT + V H SY+ T +D+A++
Sbjct: 64 IRLGARRRVATVGTEKDYIVTKVITHPSYHKPKTYSHDIALL 105
>SB_21521| Best HMM Match : Trypsin (HMM E-Value=1.7e-23)
Length = 299
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 2/102 (1%)
Frame = +1
Query: 175 DGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQ 354
DG RIVGG A PH +++ + ICG SLL+ +TAAHC R +
Sbjct: 27 DGVRIVGGDEAV----PHSWPWQVSIRLKGSHICGGSLLSPLWLLTAAHC-VIRSNNSAD 81
Query: 355 FTLALGTANIFSGGTRVTTSNVQMHGSY--NMDTLHNDVAII 474
+T+ +G GT S H Y D H D+A+I
Sbjct: 82 YTVIVGAHKRVLDGTEHKLSTFYKHEKYVGGKDKKH-DLALI 122
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 41.5 bits (93), Expect = 5e-04
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC-WRTRRAQARQFT 360
RIVGG A AGA P LA + + + CG +L+ VTAAHC + +
Sbjct: 723 RIVGGREAKAGAWPWLAAIYVK----GSFRCGGALIARDWVVTAAHCFYYDGKIVPSDIL 778
Query: 361 LALG--TANIFSGGTR-VTTSNVQMHGSYNMDTLHNDVAII 474
+ LG + G + V SN+ +H N + L DVA+I
Sbjct: 779 VRLGEHDRTLEEGSEQNVRASNLVLHPLANKNGLDFDVALI 819
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 41.1 bits (92), Expect = 7e-04
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 4/116 (3%)
Frame = +1
Query: 187 IVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLA 366
I+GG+ A G P + + ++ ICG ++++ +TAAHC + RA L
Sbjct: 546 IMGGANAEHGEWPWQVSMKLN-SSSLPHICGGNVISPWWVLTAAHCVQDERAS--NIKLT 602
Query: 367 LGTANIFS-GGTR--VTTSNVQMHGSYNMDTLHNDVAIINHNH-VGFTNNIQRINL 522
+G +F+ GT + + H +Y+ +T+ D A++ + FT +Q + L
Sbjct: 603 MGEWRLFNVDGTEQVIPVERIISHANYSYNTVDYDYALLKLTRPLNFTQYVQPVCL 658
>SB_20791| Best HMM Match : Trypsin (HMM E-Value=4.8e-12)
Length = 227
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHCWRTRRAQARQF 357
+R++ G A A A P L + G CG SL+ + +TAAHC R R++
Sbjct: 36 SRVINGVDATAHAWPWQISLRMMSKKGDDYHFCGGSLIDSEWVLTAAHCVAGIR-NPRRY 94
Query: 358 TLALGTANIFSGGT----RVTTSNVQMHGSYNMDTLHNDVAII 474
++ +G A+ G T +++ S + H Y+ L +DVA+I
Sbjct: 95 SVYVG-AHELDGTTQVEEKISISKIYSHEKYSSSLLTSDVALI 136
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/68 (30%), Positives = 35/68 (51%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+RIVGG A + P +++ N T CG SL+ +T++HC+ T + QF
Sbjct: 244 SRIVGGREAPRNSWPWQVEIILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFE 303
Query: 361 LALGTANI 384
+ LG ++
Sbjct: 304 IRLGEHDV 311
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 5/103 (4%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
TRIVGG+ A GA P A L +N CG +L+ +TAAHC R F
Sbjct: 138 TRIVGGTKAPPGAWPWQAML---RSNYGGQFCGGTLVHPQWVITAAHC--VYRRGPNDFK 192
Query: 361 LALGTANIFSG--GTR--VTTSNVQMHGSYNMDTLH-NDVAII 474
+ +G A+ G GT + S V H SY+ T + +D+A+I
Sbjct: 193 IRMG-AHFRKGDYGTEQDFSLSRVITHPSYHKPTRYAHDIALI 234
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 39.5 bits (88), Expect = 0.002
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
TRIVGG+AA G P A L T+G CG SL+ +TA HC +RR
Sbjct: 662 TRIVGGTAAKQGDWPWQAQL--RSTSG-FPFCGGSLIHPQWVLTATHCVSSRRPTDLNIR 718
Query: 361 LALGTANIFSGGTR-VTTSNVQMHGSYNMDT-LHNDVAII 474
L G + + + MH Y L +D+A+I
Sbjct: 719 LGAHNRRANLGMEQDIKVEKIIMHPGYRKPVGLAHDIALI 758
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/80 (33%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +1
Query: 244 IALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGT-ANIFSGGTRVT--TS 414
IAL + ICG SL++ T VTAAHC + + + G GT T
Sbjct: 83 IALERSGSFICGGSLVSPTWVVTAAHC-IAGSSHTPSYKVVTGEHIRNSPEGTEQTHDVK 141
Query: 415 NVQMHGSYNMDTLHNDVAII 474
+ H +YN L ND+A+I
Sbjct: 142 RIITHPTYNSPQLSNDIALI 161
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 39.1 bits (87), Expect = 0.003
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 6/105 (5%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSI--CGASLLTNTRSVTAAHCWRTRRAQAR 351
G RI+ G A PH I+L GR+ CG SL+++ VTAAHC R
Sbjct: 103 GARIINGQ----NAQPHSWPWQISL-RGRSGFHTCGGSLISDRWVVTAAHCIH-RNKNPG 156
Query: 352 QFTLALGTANIFSGGTRV----TTSNVQMHGSYNMDTLHNDVAII 474
+T+ +G A+ G T V S + H YN + ND+A++
Sbjct: 157 GYTVVVG-AHKKRGSTSVQQSLRLSQIIEHPKYNDRRIVNDIALL 200
>SB_17112| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 636
Score = 38.7 bits (86), Expect = 0.004
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 6/122 (4%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRR--AQAR 351
GTRI+ GS A + P + + I NG CG +L++ VTAAHC +
Sbjct: 349 GTRIISGSDAQPNSWPWM--VQINYNNGHH--CGGTLVSPQWVVTAAHCVDHVKDPKNYN 404
Query: 352 QFTLALGT-ANIFSGGT--RVTTSNVQMHGSYNMDT-LHNDVAIINHNHVGFTNNIQRIN 519
+ + LG S GT R + + + +H Y T ++ND+A+I N N + +N
Sbjct: 405 ELAITLGEHKRSASEGTEQRFSVARIIVHPQYFEPTAINNDIALIKLNKPARLN--KYVN 462
Query: 520 LA 525
LA
Sbjct: 463 LA 464
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/47 (46%), Positives = 25/47 (53%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
RIVGG A P AGL L + T +CG SL+ VTAAHC
Sbjct: 432 RIVGGQTAKVEDWPWQAGLKKGLDD--TIVCGGSLINREWVVTAAHC 476
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 37.5 bits (83), Expect = 0.009
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 3/101 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+RI+GG+ A P A ++I + CG +L+ VTAAHC + + +
Sbjct: 283 SRIIGGTTAAPHDWPWQAQILIHVDKSWNHRCGGTLIDTEWVVTAAHC-VFQNIEPSNYK 341
Query: 361 LALGTANIFS--GGTRVTTSNVQMHGSYNMDTLHN-DVAII 474
+ LG + S G + + + MH + D + D+AI+
Sbjct: 342 IKLGAHDRESSEGALTIPVTAIHMHTRFMTDGSYGYDIAIM 382
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 37.5 bits (83), Expect = 0.009
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQ-ARQFT 360
R+VGG A AG P IAL R CG +L+ VT AHC+ ++ R +
Sbjct: 28 RVVGGDEAKAGQFPWQ----IALLFKRQQYCGGALVHERWVVTGAHCFNPYTSEDPRDWN 83
Query: 361 LALGTANI 384
+ LG N+
Sbjct: 84 VTLGEYNL 91
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 37.1 bits (82), Expect = 0.011
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 2/123 (1%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
G+RIVGG+ A P A +++ NG CG SL+ +TAAHC + +
Sbjct: 27 GSRIVGGTEAPINGWPWQA-MLLRSPNG-DQFCGGSLIDPGWVLTAAHCLVGEQPDSALL 84
Query: 358 TLALGTANIFSGGTRVTTSNVQMHGSYNMD-TLHNDVAIIN-HNHVGFTNNIQRINLASG 531
+ + + + H +Y+ + ND+A++ N N + + LA+
Sbjct: 85 GAHYRSNKTVGTEKDIKVAQIIPHKNYHSPIEMANDIALLKLENPANLVNGVGTVCLANN 144
Query: 532 SNN 540
+ +
Sbjct: 145 NTH 147
>SB_33589| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 289
Score = 36.7 bits (81), Expect = 0.015
Identities = 23/48 (47%), Positives = 25/48 (52%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 327
RIVGG A GA P L L NG T CG SL+ VTA HC+
Sbjct: 53 RIVGGVEAAPGAWPWQVAL---LMNG-TQFCGGSLVNENWVVTARHCF 96
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 36.3 bits (80), Expect = 0.020
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
GTRIVGG+ A P A L A G + CG SL+ +TAAHC + +
Sbjct: 257 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 313
Query: 358 TLALGTANIFSGGTRVTTSN 417
+L +F R+ +N
Sbjct: 314 SLITRAFILFIEVMRLLINN 333
>SB_29414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 72
Score = 36.3 bits (80), Expect = 0.020
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCW 327
RIVGG + GA P A L + NG CG S++ + VTAAHC+
Sbjct: 26 RIVGGIESANGAWPWQAALFL---NGTHHRCGGSVIKSQWVVTAAHCF 70
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
G RIV G A + + P +A L +N T CGA+L+ ++TAAHC + ++
Sbjct: 323 GARIVNGQEAVSHSWPWIASLRKGRSNYHT--CGATLIRPGWAITAAHC----VMRPDKY 376
Query: 358 TLALGTANIFS---GGTRVTTSNVQMHGSYNMDTLHNDVAII 474
T+ +G+ + + + V H ++M +D+A++
Sbjct: 377 TVIVGSHSRDASEPSAQNIKVRRVYRHRGFSMANYVDDIALL 418
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTN-GRTSICGASLLTNTRSVTAAHC 324
G R++ G A PH I+L GR CG +L+++ VTA+HC
Sbjct: 27 GARVINGQ----NAQPHSWPWQISLRPYGRYHSCGGTLISDRWVVTASHC 72
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 36.3 bits (80), Expect = 0.020
Identities = 26/80 (32%), Positives = 36/80 (45%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
GTRIVGG+ A P A L A G + CG SL+ +TAAHC + +
Sbjct: 217 GTRIVGGTEAPVNGWPWQAMLRSA---GGSQFCGGSLIHPEWVLTAAHCLENTQPSDIEI 273
Query: 358 TLALGTANIFSGGTRVTTSN 417
+L +F R+ +N
Sbjct: 274 SLITRAFILFIEVMRLLINN 293
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 35.9 bits (79), Expect = 0.026
Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +1
Query: 247 ALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSGGTRVTTSNVQM 426
A NG ICG SLL++T +TAAHC R +T+ +G GT S
Sbjct: 332 ATLNGH-HICGGSLLSSTWVLTAAHC-VIRSHNTSDYTVIVGAHKRVLDGTEHKLSAFYK 389
Query: 427 HGSY--NMDTLHNDVAII 474
H Y D H D+A+I
Sbjct: 390 HEKYVGGKDKKH-DLALI 406
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 35.9 bits (79), Expect = 0.026
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTL 363
+IVGG GA P + T G ICG S++ + VTAAHC T+ A ++T+
Sbjct: 1782 QIVGGKVTEHGAWPWQVQIGYK-TMGH--ICGGSIVNSQWIVTAAHCVTTKPPGASRYTM 1838
Query: 364 -ALGTANIFSG 393
A N+ G
Sbjct: 1839 YAFSDLNVTLG 1849
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNG-RTSICGASLLTNTRSVTAAHCW 327
RIVGG+ A G P G+ +G + ICG +L+ +TAAHC+
Sbjct: 126 RIVGGNEAGHGTWPWQVGIYRFDHSGNQMQICGGALINREWVLTAAHCF 174
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 35.5 bits (78), Expect = 0.034
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTR 336
RIVGG A+ + P LV+ NG CG SL+ VT+ HC+ R
Sbjct: 249 RIVGGREASPNSWPWQVDLVV---NGTRHNCGGSLIDKQWVVTSGHCFDQR 296
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 238 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALG 372
+++ N T CG SL+ +T++HC+ T + QF + LG
Sbjct: 3 IILKTPNLTTHYCGGSLIDPYWILTSSHCFWTYNNISTQFEIRLG 47
>SB_44751| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 842
Score = 35.5 bits (78), Expect = 0.034
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 96 GLFCHDHGRQRHQYCCEDLHDYYQLQVPSSRI 1
G FCH H R CC+DL Y + +PS+ I
Sbjct: 601 GSFCHIHPTDRFAVCCKDLLSSYTILIPSNGI 632
>SB_31648| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 656
Score = 35.1 bits (77), Expect = 0.046
Identities = 29/114 (25%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Frame = +1
Query: 169 DFDGTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQA 348
D +R+V G A G P A L + +G +CG SL+ +TA HC T +
Sbjct: 56 DSASSRVVSGDDATLGEWPWQAWLHVT-PHG--FVCGGSLIAPQWVLTAGHCILTEDPEK 112
Query: 349 RQFTLALGTANIFSGGTRV-TTSNVQMHGSYNMDTLH-NDVAIINHNHVGFTNN 504
+ L + G ++ + H Y+ D + NDVA++ + F +
Sbjct: 113 YRVVLGDVDRDTTEGSEQIFHVRRIIKHPHYSRDVPYDNDVALLQLSRPAFVTS 166
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 34.7 bits (76), Expect = 0.060
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQAR 351
RI+GG + HP + +++ CG SL+ VTAAHC+ + R + R
Sbjct: 40 RIMGGQRSTIEQHPWMVAMML----DSAQACGGSLVPEDWIVTAAHCFDSNRLRWR 91
>SB_11317| Best HMM Match : Trypsin (HMM E-Value=3e-08)
Length = 153
Score = 34.3 bits (75), Expect = 0.080
Identities = 38/119 (31%), Positives = 51/119 (42%), Gaps = 4/119 (3%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
TRIVGG+AA A P A L A CG +L+ VTA+HC + + +
Sbjct: 22 TRIVGGTAAPKNAWPWQAQLRSA---SGFPFCGGTLVHPRFVVTASHCIDKKTPSSLRIR 78
Query: 361 LALGTANIFSGGTRVTTSNVQ---MHGSY-NMDTLHNDVAIINHNHVGFTNNIQRINLA 525
L SG + V V+ H Y N L ND+A+I N + +NLA
Sbjct: 79 LG-AHRRAESGESTVQDFRVKRIIKHERYSNPVNLANDIAVIELEEPARLN--RAVNLA 134
>SB_48467| Best HMM Match : F5_F8_type_C (HMM E-Value=1.4e-21)
Length = 418
Score = 34.3 bits (75), Expect = 0.080
Identities = 20/69 (28%), Positives = 36/69 (52%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+ I+GG+ A G P L + +CG +LLT+ +TAA C+R + +A ++
Sbjct: 256 SNIIGGTDAAVGEWPWQVSLYLTHYG---PVCGGTLLTSEWVLTAARCFRDNK-RAGEWK 311
Query: 361 LALGTANIF 387
+ LG + +
Sbjct: 312 VILGETDFY 320
>SB_37284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1031
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+RIVGG+ A GA P A ++ NG CG +L+ VTA+HC
Sbjct: 247 SRIVGGTTAQRGAWPWQA--MLRYYNG-NHFCGGTLVHPRWVVTASHC 291
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 33.5 bits (73), Expect = 0.14
Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
TR++ GS A G P A L + T ICG SL+ +TAAHC + A +
Sbjct: 30 TRVISGSEALLGEWPWQAWLHLQHTG---FICGGSLVAPGWVLTAAHCILSDDASKYKVV 86
Query: 361 LA-LGTANIFSGGTRVTTSNVQMHGSY-NMDTLHNDVAII 474
L + I + + V H +Y N NDVA++
Sbjct: 87 LGDVDRKKIEGSEQMIDVAMVIKHYAYGNPVPNANDVALL 126
>SB_17890| Best HMM Match : Trypsin (HMM E-Value=3.2)
Length = 157
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/55 (34%), Positives = 29/55 (52%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQA 348
RIVGG ++ G P L++ N R +C SL+ +TA HC++ R+ A
Sbjct: 53 RIVGGVVSSEGLWPWQVALLL---NDR-QVCAGSLIEARWIITAGHCFKDPRSSA 103
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+R++GG AA + P ++++ G+ CG +L+++ +TAAHC
Sbjct: 475 SRVIGGEAARPYSWPWQ----VSVSMGKLHSCGGALISSKWVITAAHC 518
>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1864
Score = 33.1 bits (72), Expect = 0.18
Identities = 18/82 (21%), Positives = 42/82 (51%), Gaps = 3/82 (3%)
Frame = +1
Query: 238 LVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANI---FSGGTRVT 408
+ + L+ CG +L+ +TAAHC+ R + ++T+ +G +++ G ++
Sbjct: 1254 VALTLSGNPVQRCGGALIAADWVLTAAHCF-DRFSMPPEWTVQVGVSDMRRRDGKGQSLS 1312
Query: 409 TSNVQMHGSYNMDTLHNDVAII 474
+ +H YN + +D+A++
Sbjct: 1313 IKAIFVHPQYNSSSHEHDLAVL 1334
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/72 (34%), Positives = 34/72 (47%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFT 360
+R+V G+ A A P L TNG+ ICG SL+T +TAAHC +T
Sbjct: 36 SRVVNGANAPQHAWPWQISL---RTNGQ-HICGGSLITPEWVLTAAHC-VDHYPYPGAYT 90
Query: 361 LALGTANIFSGG 396
+ +G GG
Sbjct: 91 VVVGWGRTVGGG 102
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRT-SICGASLLTNTRSVTAAHC 324
G RI+ G A PH I+L GR +CG +L+++ VTA+HC
Sbjct: 843 GARIINGQ----NAQPHSWPWQISLRQGRRFHLCGGALISDRWVVTASHC 888
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = +1
Query: 178 GTRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQF 357
G R++GG A PH I+L +CG +L++ +TA HC + +
Sbjct: 433 GARVIGGE----DAAPHSWPWQISLRVRGKHMCGGTLISPDWVLTAGHCVH-GQLDPSGY 487
Query: 358 TLALGTAN 381
T+ +GT N
Sbjct: 488 TVVVGTLN 495
>SB_10942| Best HMM Match : PDZ (HMM E-Value=2.3e-08)
Length = 386
Score = 32.3 bits (70), Expect = 0.32
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
TRIVGG+AA + P A L T CG SL+ +TA HC
Sbjct: 52 TRIVGGTAAKQNSWPWQAQL---RTTSGFPYCGGSLIHPQWILTATHC 96
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 31.5 bits (68), Expect = 0.56
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
RIVGG GA+P + + G CG SL++ +TAAHC
Sbjct: 107 RIVGGHDTVKGAYPWH----VLIRKGGHVACGGSLISEKWVLTAAHC 149
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 31.5 bits (68), Expect = 0.56
Identities = 20/48 (41%), Positives = 26/48 (54%)
Frame = +1
Query: 181 TRIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
+R+V G A + P L + NGR ICG SL+T +TAAHC
Sbjct: 79 SRVVNGDNAAQHSWPWQISLRV---NGR-HICGGSLITPEWVLTAAHC 122
>SB_13096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1465
Score = 31.1 bits (67), Expect = 0.74
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIAL--TNGRTSICGASLLTNTRSVTAAHC 324
RI GGS + G +P L +N T CG +L+ +TAAHC
Sbjct: 1160 RIYGGSDSIPGGYPWQVALEFDTFQSNYNTFHCGGTLIAEDWVLTAAHC 1208
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/19 (68%), Positives = 14/19 (73%)
Frame = +2
Query: 113 TSRSVSPGPRVLDAPRKPL 169
TS P PRVLD+PRKPL
Sbjct: 379 TSLLAYPTPRVLDSPRKPL 397
>SB_32032| Best HMM Match : PAN (HMM E-Value=0.029)
Length = 610
Score = 29.1 bits (62), Expect = 3.0
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +3
Query: 489 WLHQQHPAHQPSQWKQQLCWYLGLGCRLRK 578
W+++ HP H+ ++LC+ +G C R+
Sbjct: 457 WMNESHPRHEDGIVSRRLCYRVGGDCCARR 486
>SB_38755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 471
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +1
Query: 421 QMHGSYNMDTLHNDVAIINHNHVGFTNNIQRINLASGSNN 540
Q H N+ ++N+ IIN+N++ NNI N+ +NN
Sbjct: 384 QQHHHQNI-IINNNNIIINNNNIIINNNINNNNIIINNNN 422
>SB_17803| Best HMM Match : SRCR (HMM E-Value=0)
Length = 1428
Score = 28.3 bits (60), Expect = 5.2
Identities = 28/107 (26%), Positives = 44/107 (41%), Gaps = 11/107 (10%)
Frame = +1
Query: 250 LTNGRTSICGASLLTNTRSVTAAHCWRTRRAQARQFTLALGTANIFSG------GTR--- 402
L R C L++ +TAAHC+ R + Q + LG SG G+R
Sbjct: 1106 LNRRRFPFCSGVLISARHVITAAHCF-DRIIRTDQIIVRLGAYIARSGRLDWGMGSRWEQ 1164
Query: 403 -VTTSNVQMHGSYNMDT-LHNDVAIINHNHVGFTNNIQRINLASGSN 537
+ + + H SY T ND+A++ N +R+N+ N
Sbjct: 1165 EIAVAAIHKHPSYQAPTRWANDIAVLKLARPAILN--KRVNVVCMEN 1209
>SB_35844| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 249
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +1
Query: 184 RIVGGSAANAGAHPHLAGLVIALTNGRTSICGASLLTNTRSVTAAHC 324
R+V GS + P L+ + CG +L+ VTAAHC
Sbjct: 43 RVVSGSEVEPQSWPWQVHLLQSRDGSFLHKCGGALIDREWVVTAAHC 89
>SB_27634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 711
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -2
Query: 240 KSSKMGVSTSVGGRTTHNPGTVEVSGFLGASKTLGPG 130
KSSK S+S TTH P V + T GPG
Sbjct: 61 KSSKSSKSSSTSSSTTHGPTPVPATPSSPPRPTPGPG 97
>SB_7929| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 149
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/27 (55%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +2
Query: 80 SWQKSPSNSTTTSRSVSPG-PRVLDAP 157
S+ K SNS T S S SPG P VL+ P
Sbjct: 14 SYPKRNSNSHTASNSCSPGDPLVLERP 40
>SB_47534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 274 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 191
RW + + ++++DG H RW NHP
Sbjct: 77 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 103
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = -1
Query: 274 RWKFCHSSVRSQVQQDGGEHQRWRQNHP 191
RW + + ++++DG H RW NHP
Sbjct: 165 RWSLPWAVAQPRIEEDGPYHGRW-HNHP 191
>SB_2152| Best HMM Match : EGF (HMM E-Value=0)
Length = 1603
Score = 27.5 bits (58), Expect = 9.1
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -2
Query: 240 KSSKMGVSTSVGGRT-THNPGTVEVSGFLGASKTLGPGDTDLD 115
KS+++ V G + TH G VEVSG L LG + + D
Sbjct: 1190 KSAQLDVKEGKGYKQLTHQLGLVEVSGLLRCRGRLGNSELEAD 1232
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.129 0.378
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,045,105
Number of Sequences: 59808
Number of extensions: 315825
Number of successful extensions: 1486
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1455
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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