Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e24r
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   157   9e-39
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   157   9e-39

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  157 bits (382), Expect = 9e-39
 Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 3/188 (1%)
 Frame = -3

Query: 585 TDEERELVRGASDFFGVNHYTGFLVSAN--EQISDRPTIPILPDI-TVGNYIPPEWPQSA 415
           T EE   +RG SDFFG+N YT  LV++N        P      D+  V +    +WP S 
Sbjct: 315 TTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFPVPSFNHDMGVVESQEGVDWPGSG 374

Query: 414 SYWLTLSPDSIYDTLTYLQKRYNDPIFYITENGWSSPPTNGLLDDDRIRYYRAALESVLD 235
           S WL + P  +Y+ L ++ + YN P   +TENG S     GL D  R+ YY   L +VLD
Sbjct: 375 SVWLKVYPKGMYNLLMWIHREYNAPEIIVTENGVSD--RGGLEDYARVDYYNLYLSAVLD 432

Query: 234 CLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDFSDPARPRTPRKSAFVYKEILRSR 55
            ++ G  + GY+AWSLMD++EW  G++E+FGLY VDF+ P R RTP+ SA V+ ++ ++ 
Sbjct: 433 AMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSPQRTRTPKISARVFAQLCKTN 492

Query: 54  VIDHDYEP 31
            ID  Y P
Sbjct: 493 TIDWSYRP 500


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  157 bits (382), Expect = 9e-39
 Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 3/188 (1%)
 Frame = -3

Query: 585 TDEERELVRGASDFFGVNHYTGFLVSAN--EQISDRPTIPILPDI-TVGNYIPPEWPQSA 415
           T EE   +RG SDFFG+N YT  LV++N        P      D+  V +    +WP S 
Sbjct: 315 TTEEIHRIRGTSDFFGINSYTSNLVTSNGHNNTGKFPVPSFNHDMGVVESQEGVDWPGSG 374

Query: 414 SYWLTLSPDSIYDTLTYLQKRYNDPIFYITENGWSSPPTNGLLDDDRIRYYRAALESVLD 235
           S WL + P  +Y+ L ++ + YN P   +TENG S     GL D  R+ YY   L +VLD
Sbjct: 375 SVWLKVYPKGMYNLLMWIHREYNAPEIIVTENGVSD--RGGLEDYARVDYYNLYLSAVLD 432

Query: 234 CLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDFSDPARPRTPRKSAFVYKEILRSR 55
            ++ G  + GY+AWSLMD++EW  G++E+FGLY VDF+ P R RTP+ SA V+ ++ ++ 
Sbjct: 433 AMEDGANISGYIAWSLMDSYEWKAGFSEKFGLYHVDFNSPQRTRTPKISARVFAQLCKTN 492

Query: 54  VIDHDYEP 31
            ID  Y P
Sbjct: 493 TIDWSYRP 500


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,677,576
Number of Sequences: 53049
Number of extensions: 705857
Number of successful extensions: 2152
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2148
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)