Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e24r
         (644 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...   128   3e-30
U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...   109   1e-24
AF077536-11|AAK31413.1|  217|Caenorhabditis elegans Hypothetical...    29   3.7  
Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF077537-1|AAC26273.2|  111|Caenorhabditis elegans Hypothetical ...    27   8.6  

>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score =  128 bits (309), Expect = 3e-30
 Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 8/195 (4%)
 Frame = -3

Query: 621 KRRLPVVQNSGITDEERELVRGASDFFGVNHYTGFLVSANEQISDRPTIPILPDITVGNY 442
           + R+P +     ++EE+E+++G++DF G+N+Y  FLV A +   ++ +     D   G Y
Sbjct: 280 RERMPFIPK--FSEEEKEIIKGSTDFIGINYYLSFLVRAPKD-GEKASSQSQHD---GGY 333

Query: 441 IPPE--WPQ-SASYWLTLSPDSIYDTLTYLQKRY-NDPIFYITENGW----SSPPTNGLL 286
           +  E  W +     W+  +PD +   L Y++++Y N P+F ITENG          +   
Sbjct: 334 VFVEGKWDKICGETWIRYAPDGLLKILRYVKEKYANTPVF-ITENGCMDIVGQDQEDAFH 392

Query: 285 DDDRIRYYRAALESVLDCLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDFSDPARP 106
           D  RI Y    LE+V   LD G  + GY  W+LMDNFEW +G+  +FGL EVDF  P + 
Sbjct: 393 DQHRIDYISGHLEAVAKALDEGCNVIGYTVWTLMDNFEWDDGFELKFGLCEVDFESPDKT 452

Query: 105 RTPRKSAFVYKEILR 61
           RT +KSA+ YKE ++
Sbjct: 453 RTMKKSAYFYKEFIK 467


>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score =  109 bits (263), Expect = 1e-24
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 8/195 (4%)
 Frame = -3

Query: 621 KRRLPVVQNSGITDEERELVRGASDFFGVNHYTGFLVSANEQISDRPTIPILPDITVGNY 442
           + +LP +     ++EE++L++G++DF G+N+Y   +V  N    + P      D     +
Sbjct: 280 REKLPFLPK--FSEEEKKLIKGSTDFLGINYYLSHIVR-NLNDGEEPASQSERDAAYA-F 335

Query: 441 IPPEWPQ-SASYWLTLSPDSIYDTLTYLQKRYNDPIFYITENGW------SSPPTNGLLD 283
              +W +     W+  +PD ++  L Y++ +YN+   +ITENG              +LD
Sbjct: 336 NEGKWEKICGETWVRYAPDGLFGLLKYVRDKYNNIPVFITENGCMDLVGGEGRKEEEILD 395

Query: 282 DD-RIRYYRAALESVLDCLDAGIRLKGYMAWSLMDNFEWLEGYTERFGLYEVDFSDPARP 106
           D  RI++    LE+V   L+ G  + GY  W+LMDNFEW +G+  +FG+  VDF  P + 
Sbjct: 396 DKHRIKFISGHLEAVAKALEEGCNVIGYTLWTLMDNFEWDDGFGVKFGICRVDFDSPDKT 455

Query: 105 RTPRKSAFVYKEILR 61
           RT + SA  Y+  +R
Sbjct: 456 RTMKYSAKYYQTFIR 470


>AF077536-11|AAK31413.1|  217|Caenorhabditis elegans Hypothetical
           protein C16A11.8 protein.
          Length = 217

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = -3

Query: 636 AEKKCKRRLPVVQNSGITDEERELVRGASDFFGVNHYT 523
           A++ C R   V+      DE++ +VR AS +F  N+ T
Sbjct: 79  AQEACNREGSVLSTFACYDEQKHIVRHASKYFRRNNIT 116


>Z82057-2|CAD89759.1|  561|Caenorhabditis elegans Hypothetical
           protein T26H8.4 protein.
          Length = 561

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 13/41 (31%), Positives = 19/41 (46%)
 Frame = -1

Query: 551 RTSLGSTITPASWCLPTSKFLIALLYLYSLTSLWEITSPPN 429
           +  +  TIT  S    T+   I LL  Y L  +W ++  PN
Sbjct: 101 KAQMFKTITRFSVITATTSITIILLIFYELFKIWSLSHVPN 141


>U00048-5|AAB53832.2|  621|Caenorhabditis elegans Hypothetical
           protein C05D11.7a protein.
          Length = 621

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 546 FFGVNHYTGFLVSANEQISDRPTIPILPDITVGNYIPPEWPQSASYWLTLSPDSI 382
           F GV +  G  VS N+ I D  T+ + P     +  PP+W   +   +  +  SI
Sbjct: 160 FRGVQYIDGG-VSDNQPIYDEHTVTVSPFSGESDICPPDWDSGSMLGVDFNGTSI 213


>U00048-4|AAM15547.1|  751|Caenorhabditis elegans Hypothetical
           protein C05D11.7b protein.
          Length = 751

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 16/55 (29%), Positives = 25/55 (45%)
 Frame = -3

Query: 546 FFGVNHYTGFLVSANEQISDRPTIPILPDITVGNYIPPEWPQSASYWLTLSPDSI 382
           F GV +  G  VS N+ I D  T+ + P     +  PP+W   +   +  +  SI
Sbjct: 160 FRGVQYIDGG-VSDNQPIYDEHTVTVSPFSGESDICPPDWDSGSMLGVDFNGTSI 213


>AF077537-1|AAC26273.2|  111|Caenorhabditis elegans Hypothetical
           protein F16G10.5 protein.
          Length = 111

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 154 RTFRFVRG*LFGSRPPSHPAQVRLRLQGDLEKQGHRPRLRAQ 29
           R  R+VRG      PP  P + R RLQ  ++++    R+R++
Sbjct: 30  REGRWVRGAREDREPPPPPRRPRTRLQVRVDREAAEARMRSR 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,445,354
Number of Sequences: 27780
Number of extensions: 349052
Number of successful extensions: 921
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 875
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)