Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e24f
         (623 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   3.6  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   3.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.3  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   8.4  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -1

Query: 548 DSVTEIRVDHARVVFKPNGSQWIG 477
           +  T I  D  +V +  NG QWIG
Sbjct: 379 NGATYIWDDEMKVPYAVNGDQWIG 402



 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 548 DSVTEIRVDHARVVFKPNGSQWIG 477
           D+ T +  +  +V F   G+QW+G
Sbjct: 809 DNTTLVWDNEQQVPFAYRGNQWVG 832


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 141 WNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANS 242
           W +D K  N  +     NPA V   + G + A +
Sbjct: 288 WKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKT 321


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = -1

Query: 524 DHARVVFKPNGSQWIG 477
           +H +V +   G+QW+G
Sbjct: 329 EHGKVPYAYKGNQWVG 344


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 10/34 (29%), Positives = 15/34 (44%)
 Frame = +3

Query: 141 WNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANS 242
           W +D K  N  +     NPA V   + G + A +
Sbjct: 288 WKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKT 321


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -1

Query: 101  EEVIRKPSLLLGR*CGAAHH 42
            E  +RK SL  G+ C   HH
Sbjct: 1291 ETEVRKKSLDFGKLCSLHHH 1310


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/31 (25%), Positives = 16/31 (51%)
 Frame = +3

Query: 486  LASIWFEDYARVVYTNFGDRVKHWITINEPR 578
            +A +++     VV+ N    + +WI+   PR
Sbjct: 1603 VAPLYYHPEDEVVFYNANFSINYWISEGVPR 1633


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = +3

Query: 480 NPLASIWFEDYARVVYTNFGDRVKHWITINEPREYATRVTAL 605
           NP   I +E Y R +  +  +++  ++T+N        +TA+
Sbjct: 440 NPTPEITWELYGRRLSNSERNQIGQYVTVNGDVVSHLNITAI 481


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,075
Number of Sequences: 336
Number of extensions: 2760
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)