Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e24f
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...   138   4e-33
AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...   134   6e-32
AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...    30   1.2  
Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical pr...    29   2.7  
U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical pr...    29   3.6  
U49944-4|AAA93419.1|  457|Caenorhabditis elegans Neuropeptide re...    27   8.2  
U41007-18|AAA82262.2|  295|Caenorhabditis elegans Hypothetical p...    27   8.2  
AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical ...    27   8.2  
AF040641-4|AAB94945.1|  451|Caenorhabditis elegans Hypothetical ...    27   8.2  
AF040641-3|AAT81205.1|  509|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score =  138 bits (333), Expect = 4e-33
 Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 1/165 (0%)
 Frame = +3

Query: 81  RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           +FP +F + TATA+YQIEGA N DG+G + WD +   N   + D S  D++       + 
Sbjct: 6   KFPKNFQLATATAAYQIEGAKNLDGRGFSTWDSIRSEN-GRIHDNSDPDLSCEGRLKYKE 64

Query: 261 DVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVDYYNRLINEMLKYGITPMITLFHW 440
           DV ++ ++G+  YRFS+SWSRILP G    INE G+ +Y  +   +   GI P++TLFH+
Sbjct: 65  DVALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHF 124

Query: 441 DLPQKLQELG-GFANPLASIWFEDYARVVYTNFGDRVKHWITINE 572
           D+P  + + G  + N      FE +A + +  FGD VK WIT NE
Sbjct: 125 DMPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFNE 169


>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score =  134 bits (323), Expect = 6e-32
 Identities = 66/165 (40%), Positives = 100/165 (60%), Gaps = 1/165 (0%)
 Frame = +3

Query: 81  RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           +FP +F + TATA+YQIEGA + +G+G + WD +    P  + D S  D++ +     + 
Sbjct: 6   KFPKNFKLATATAAYQIEGAKDLNGRGFSTWDAI-RLEPGRILDNSDPDLSCDGLLKYKE 64

Query: 261 DVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVDYYNRLINEMLKYGITPMITLFHW 440
           DV ++ E+G+  YRFS+SWSRILP G  + INE G+ +Y  L   + +  I P++TLFH+
Sbjct: 65  DVALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHF 124

Query: 441 DLPQKLQELG-GFANPLASIWFEDYARVVYTNFGDRVKHWITINE 572
           D+P  + + G  + N      FE +A + +  FGD VK WIT NE
Sbjct: 125 DMPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYNE 169


>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 117 ASYQIEGA--WNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           A YQ++    W+ D   E++ D L+H NP  + D        N  H + R
Sbjct: 459 ALYQMDAPDNWHHDDPSEDLDDLLSHENPETLDDTMRNSNTDNDLHLILR 508


>Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical
           protein F31F6.5 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 551 FDSVTEIRVDHARVVFKPNGSQWIGEASQF 462
           F  +TE+RVD    VF P+ ++W  E S F
Sbjct: 43  FFRMTELRVDDPSYVFTPSDARWRREISVF 72


>U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical
           protein F49E8.6 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 43  WCAAPHYRPSSREGFRMTSSSGLPPPPT 126
           +CA P    SS      TSS  LPPPPT
Sbjct: 126 YCAPPPGPSSSAPPTLPTSSGNLPPPPT 153


>U49944-4|AAA93419.1|  457|Caenorhabditis elegans Neuropeptide
           receptor family protein1 protein.
          Length = 457

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
 Frame = +3

Query: 405 YGITPMITLFHWDLPQKLQELGGFANPLASIWFEDYAR--VVYTNFGDRVKHWITINEPR 578
           Y I+ ++ LF   +      L    NP+   W     R  V+ T FGDR K    IN+  
Sbjct: 317 YDISYLLNLFTHSIAMSNNVL----NPVLYAWLNPSFRQLVIKTYFGDRRKSDRIINQTS 372

Query: 579 EYATRVTALFIKHLS 623
            Y T++     KHL+
Sbjct: 373 VYKTKIVH-DTKHLN 386


>U41007-18|AAA82262.2|  295|Caenorhabditis elegans Hypothetical
           protein C33H5.1 protein.
          Length = 295

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
 Frame = +3

Query: 387 INEMLKYGITPMITLFHWDLPQKLQELGGFA--NPLASIWFEDYARVVYTNFGDR 545
           I++ ++ GIT    +FH D   +L E   +    P    W+ D+ R+V  N  D+
Sbjct: 234 IHKDIENGITGERKMFH-DFVWRLMEDKRYIMIRPFNVFWYHDFIRIVLINVADK 287


>AL117202-1|CAB55091.2|  454|Caenorhabditis elegans Hypothetical
           protein Y47D3A.1 protein.
          Length = 454

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
 Frame = -1

Query: 578 SRLINGDPMFDSVTEIRVDHARVVF-KPNGSQWIGEASQFLQLLRQVPVE*SNHRGYA 408
           SRL+N    F  +  IR++H  V+F KP     I         L  V +   N R YA
Sbjct: 48  SRLVNKAFNFGIIHSIRIEHQTVIFHKPTRCDIIRRCPNCTVNLNSVELNVKNIRKYA 105


>AF040641-4|AAB94945.1|  451|Caenorhabditis elegans Hypothetical
           protein D1069.3a protein.
          Length = 451

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +3

Query: 72  QQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKD 212
           Q    PD  L+  +  +  ++  W+++ +GE +W    H +    +D
Sbjct: 295 QYEMLPDTLLVVNSLRNSLLDNMWSKEKRGELMWTRPQHKDQTKRRD 341


>AF040641-3|AAT81205.1|  509|Caenorhabditis elegans Hypothetical
           protein D1069.3b protein.
          Length = 509

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/47 (21%), Positives = 22/47 (46%)
 Frame = +3

Query: 72  QQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKD 212
           Q    PD  L+  +  +  ++  W+++ +GE +W    H +    +D
Sbjct: 295 QYEMLPDTLLVVNSLRNSLLDNMWSKEKRGELMWTRPQHKDQTKRRD 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,309,134
Number of Sequences: 27780
Number of extensions: 248305
Number of successful extensions: 782
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)