Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e21r
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0811 - 19909128-19912214                                         29   2.7  
12_02_0304 + 17112677-17113195                                         29   3.6  
12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649     29   4.7  
07_03_0951 - 22836167-22836358,22836455-22837213                       29   4.7  
03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11...    29   4.7  
02_02_0549 + 11410129-11412180                                         29   4.7  
03_06_0203 - 32337928-32338025,32338745-32338820,32338905-323389...    28   6.2  
08_02_1480 + 27401923-27402158,27402847-27402982,27403119-274031...    28   8.3  
01_07_0385 - 43212580-43213142,43213234-43213612                       28   8.3  

>04_03_0811 - 19909128-19912214
          Length = 1028

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 596  GCWSVRKLRRLKFCHS*VRSQVQQDGGEHXRWR 694
            GCWS+R+L  L+  HS   SQ  +  GE   WR
Sbjct: 962  GCWSLRRLPLLRQEHS---SQAVEVSGERAWWR 991


>12_02_0304 + 17112677-17113195
          Length = 172

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -2

Query: 556 PRLVSSPSLLAQLTSSPEAPGSPPPV 479
           PR   SPS+ A+ T +P    SPPPV
Sbjct: 42  PRRAPSPSVTAEPTPAPVIAPSPPPV 67


>12_02_0367 - 18053979-18054618,18055844-18055988,18056049-18056649
          Length = 461

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 623 CGASLLTNTRSVTAAHCWRSR 561
           CG+ ++T TRSVT A C  S+
Sbjct: 275 CGSRIITTTRSVTVASCCSSQ 295


>07_03_0951 - 22836167-22836358,22836455-22837213
          Length = 316

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 297 SQQPTKTPSQPSGHY*RRLRPDFWK 223
           S  PT TPSQPS  Y RR R + W+
Sbjct: 63  SPPPTPTPSQPSSSYHRR-RRESWE 86


>03_01_0014 +
           113638-113754,113836-113950,114570-114835,115365-115575,
           115915-115979,118723-118930,119457-119566,119663-119913,
           120250-120356,120442-120509,120624-120701,121070-121198,
           121341-121481,122297-122344,122648-122743,124071-124183,
           124441-124591,124745-124818,124913-125072,125356-125454,
           125532-125618,125761-125907
          Length = 946

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/39 (28%), Positives = 15/39 (38%)
 Frame = +2

Query: 275 GVFVGCWLPKQHRKFCRSRQPRPKYQQSCCFHWLG*CAE 391
           G + G +  +  RK+     P       CC HW   C E
Sbjct: 149 GTYTGIFRQELQRKYHLKNSPCDPCMVHCCLHWCANCQE 187


>02_02_0549 + 11410129-11412180
          Length = 683

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = -1

Query: 536 LAFGTANIFSGGTRVTTSSVHMHGSYNMNNLHN-DVAVINHNHVGFNNNIQRINLASGSN 360
           LA     +F+G   V ++S H+  +  ++ + N D   IN+NHVG N N    +LAS  N
Sbjct: 129 LANNYMGLFNGTGSVGSASNHLF-AVELDTIQNPDFRDINNNHVGININ----DLASRDN 183

Query: 359 N 357
           +
Sbjct: 184 D 184


>03_06_0203 -
           32337928-32338025,32338745-32338820,32338905-32338971,
           32339181-32339275,32340062-32340151,32340293-32340340,
           32340764-32341069
          Length = 259

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 556 PRLVSSPSLLAQLTSSPEAPGSPPP 482
           PRLVSSP+ L    + P+ P  P P
Sbjct: 49  PRLVSSPAKLTDDATPPQPPPQPQP 73


>08_02_1480 +
           27401923-27402158,27402847-27402982,27403119-27403168,
           27403810-27403813,27404394-27404494,27405084-27406305
          Length = 582

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 544 SSPSLLAQLTSSPEAPGSPPP 482
           SS S  +  +SSP AP SPPP
Sbjct: 7   SSTSSSSSASSSPRAPSSPPP 27


>01_07_0385 - 43212580-43213142,43213234-43213612
          Length = 313

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 483 GGGDPGASGEDVSCAKSEGELTSLGIPGPP--AVSSGHR 593
           GGGD GAS   VS A +      +G+  PP   V +G R
Sbjct: 182 GGGDGGASSVVVSAAAAAARRLPVGVRKPPLHVVVTGER 220


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,600,931
Number of Sequences: 37544
Number of extensions: 325679
Number of successful extensions: 1340
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1339
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)