Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e17r
(344 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14; Eukaryota|... 116 1e-25
UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33; Eukary... 107 5e-23
UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S riboso... 105 3e-22
UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24; Eukary... 102 1e-21
UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core eu... 90 1e-17
UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9; T... 83 9e-16
UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep: LO... 82 2e-15
UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep: Pr... 77 8e-14
UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1; ... 63 1e-09
UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=... 59 2e-08
UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of s... 59 2e-08
UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of str... 58 3e-08
UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1; ... 55 3e-07
UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative; ... 53 1e-06
UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 53 2e-06
UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8; Fungi/M... 51 6e-06
UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative; ... 50 1e-05
UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa... 44 7e-04
UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169, w... 43 0.001
UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Re... 42 0.004
UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropy... 41 0.005
UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative; ... 38 0.046
UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1; ... 38 0.060
UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2; ... 34 0.75
UniRef50_A5FP19 Cluster: Septum formation initiator; n=2; Flavob... 33 0.98
UniRef50_Q4Y2B8 Cluster: Putative uncharacterized protein; n=1; ... 32 2.3
UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Re... 32 3.0
UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5; ... 32 3.0
UniRef50_Q4EBT3 Cluster: Ankyrin repeat domain protein; n=4; Wol... 31 4.0
UniRef50_Q4N7X6 Cluster: Putative uncharacterized protein; n=1; ... 31 4.0
UniRef50_A5GSE8 Cluster: Permease of the major facilitator super... 31 5.3
UniRef50_Q3V2G4 Cluster: Adult male small intestine cDNA, RIKEN ... 31 6.9
UniRef50_A6CKF6 Cluster: Putative helicase; n=1; Bacillus sp. SG... 31 6.9
UniRef50_A0EFV2 Cluster: Chromosome undetermined scaffold_94, wh... 31 6.9
UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4; Peziz... 31 6.9
UniRef50_Q82RE7 Cluster: Putative uncharacterized protein; n=3; ... 30 9.2
UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Se... 30 9.2
UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora cras... 30 9.2
>UniRef50_Q962S5 Cluster: Ribosomal protein L38; n=14;
Eukaryota|Rep: Ribosomal protein L38 - Spodoptera
frugiperda (Fall armyworm)
Length = 70
Score = 116 bits (278), Expect = 1e-25
Identities = 55/58 (94%), Positives = 57/58 (98%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MPREIKDIKDFL+KARRKDAKSVKIKKN +NVKFKVRCSRFLYTLVITDKEKAEKLKQ
Sbjct: 1 MPREIKDIKDFLLKARRKDAKSVKIKKNQQNVKFKVRCSRFLYTLVITDKEKAEKLKQ 58
>UniRef50_P63173 Cluster: 60S ribosomal protein L38; n=33;
Eukaryota|Rep: 60S ribosomal protein L38 - Homo sapiens
(Human)
Length = 70
Score = 107 bits (257), Expect = 5e-23
Identities = 50/58 (86%), Positives = 56/58 (96%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MPR+I++IKDFL+ ARRKDAKSVKIKKN +NVKFKVRCSR+LYTLVITDKEKAEKLKQ
Sbjct: 1 MPRKIEEIKDFLLTARRKDAKSVKIKKNKDNVKFKVRCSRYLYTLVITDKEKAEKLKQ 58
>UniRef50_UPI0000F201A6 Cluster: PREDICTED: similar to 60S ribosomal
protein L38; n=1; Danio rerio|Rep: PREDICTED: similar to
60S ribosomal protein L38 - Danio rerio
Length = 154
Score = 105 bits (251), Expect = 3e-22
Identities = 49/58 (84%), Positives = 55/58 (94%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
+PREI++IKDFL+ A+RKDAKSVKIKKN +NVKFKVRCSR LYTLVITDKEKAEKLKQ
Sbjct: 17 LPREIEEIKDFLLTAKRKDAKSVKIKKNKDNVKFKVRCSRHLYTLVITDKEKAEKLKQ 74
>UniRef50_O17570 Cluster: 60S ribosomal protein L38; n=24;
Eukaryota|Rep: 60S ribosomal protein L38 -
Caenorhabditis elegans
Length = 70
Score = 102 bits (245), Expect = 1e-21
Identities = 46/58 (79%), Positives = 53/58 (91%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MP+EIK+IKDFL+KARRKDAKSVKIKKN N KFKVRC+ +LYTLV+ DK+KAEKLKQ
Sbjct: 1 MPKEIKEIKDFLVKARRKDAKSVKIKKNSNNTKFKVRCASYLYTLVVADKDKAEKLKQ 58
>UniRef50_O22860 Cluster: 60S ribosomal protein L38; n=2; core
eudicotyledons|Rep: 60S ribosomal protein L38 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 69
Score = 89.8 bits (213), Expect = 1e-17
Identities = 40/58 (68%), Positives = 52/58 (89%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MP++I +IKDFL+ ARRKDA+SVKIK++ + VKFKVRCSR+LYTL + D+EKA+KLKQ
Sbjct: 1 MPKQIHEIKDFLLTARRKDARSVKIKRSKDIVKFKVRCSRYLYTLCVFDQEKADKLKQ 58
>UniRef50_Q8MXL3 Cluster: Ribosomal protein L38, putative; n=9;
Trypanosomatidae|Rep: Ribosomal protein L38, putative -
Leishmania major
Length = 83
Score = 83.4 bits (197), Expect = 9e-16
Identities = 36/58 (62%), Positives = 47/58 (81%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MPREIK +K+FL RKDA+ VK+K NP KFKVRCSR+LYTLV+ DK+KA+K+++
Sbjct: 1 MPREIKTLKEFLAICSRKDARCVKVKHNPSATKFKVRCSRYLYTLVVNDKKKADKIER 58
>UniRef50_Q0V9Y6 Cluster: LOC548667 protein; n=5; Xenopus|Rep:
LOC548667 protein - Xenopus tropicalis (Western clawed
frog) (Silurana tropicalis)
Length = 419
Score = 82.2 bits (194), Expect = 2e-15
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = -1
Query: 128 RKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
RKDAKSVKIKKN +NVKFKVRCS++LYTLVITDKEKAEKLKQ
Sbjct: 366 RKDAKSVKIKKNKDNVKFKVRCSKYLYTLVITDKEKAEKLKQ 407
>UniRef50_A6R3N8 Cluster: Predicted protein; n=4; Dikarya|Rep:
Predicted protein - Ajellomyces capsulatus NAm1
Length = 79
Score = 77.0 bits (181), Expect = 8e-14
Identities = 36/60 (60%), Positives = 45/60 (75%), Gaps = 2/60 (3%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPEN--VKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MP E+ DIK F+ RRKDA S +IK+N + +KFKVRC RFLYTLV+ D +KA+KLKQ
Sbjct: 1 MPSEVSDIKQFIEICRRKDASSARIKRNRKTSQIKFKVRCQRFLYTLVLKDSDKADKLKQ 60
>UniRef50_UPI00004985A3 Cluster: 60S ribosomal protein L38; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L38 - Entamoeba histolytica HM-1:IMSS
Length = 77
Score = 62.9 bits (146), Expect = 1e-09
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MP+++++ K L + ++V++K N EN KFKVRC+++LYT + DK KAE+LK+
Sbjct: 1 MPKQVQEFKQILKLLKSGSIRAVRVKTNGENTKFKVRCAKYLYTYICADKAKAEELKK 58
>UniRef50_Q4UGN5 Cluster: 60S ribosomal protein L38, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L38, putative -
Theileria annulata
Length = 79
Score = 59.3 bits (137), Expect = 2e-08
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 5/62 (8%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPE-----NVKFKVRCSRFLYTLVITDKEKAEK 12
MP+E+KD+KD+L +R DAKSV + K + KFKVRCSR+LYT + ++ KA K
Sbjct: 1 MPKELKDLKDYLNVLKRPDAKSVVVYKKKSKGGLLSTKFKVRCSRYLYTFSVPNQVKAAK 60
Query: 11 LK 6
++
Sbjct: 61 VE 62
>UniRef50_Q6BYT4 Cluster: Debaryomyces hansenii chromosome A of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
A of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 78
Score = 59.3 bits (137), Expect = 2e-08
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 9/67 (13%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNP---------ENVKFKVRCSRFLYTLVITDKE 24
M REIKDIK+F+ ARR D KS +K N + KFKVR SR+ YTLV+ D
Sbjct: 1 MAREIKDIKEFVELARRSDIKSAVVKVNKALNANGKKIKQTKFKVRGSRYQYTLVVNDAA 60
Query: 23 KAEKLKQ 3
KA+KL+Q
Sbjct: 61 KAKKLQQ 67
>UniRef50_Q6CF08 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 84
Score = 58.4 bits (135), Expect = 3e-08
Identities = 25/54 (46%), Positives = 35/54 (64%)
Frame = -1
Query: 164 IKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
+ IKDFL R D +SV +K + + KFK+RC R LYTL + D+ KA+K+ Q
Sbjct: 18 LTSIKDFLATCSRDDVESVTVKYSANDTKFKIRCPRMLYTLTVDDRTKADKIVQ 71
>UniRef50_A2ETM7 Cluster: Ribosomal protein L38e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L38e,
putative - Trichomonas vaginalis G3
Length = 98
Score = 55.2 bits (127), Expect = 3e-07
Identities = 26/55 (47%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Frame = -1
Query: 188 FVFNMPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDK 27
F +MP+++ K+FL A R DAK VK+KK + EN KFK+R +++LYTL + K
Sbjct: 21 FFTSMPKQVTTPKEFLALAARSDAKWVKVKKSSDENTKFKLRTTKYLYTLTVKPK 75
>UniRef50_A2DFD5 Cluster: 60S ribosomal protein L38-2, putative;
n=4; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-2, putative - Trichomonas vaginalis G3
Length = 74
Score = 53.2 bits (122), Expect = 1e-06
Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDK 27
MP+++ K+FL A R DAK VK+KK N + KFK+R ++FLYTLV+ K
Sbjct: 1 MPKQVATPKEFLALAARPDAKWVKVKKVNDDLTKFKLRTTKFLYTLVVKPK 51
>UniRef50_Q6CSS8 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome C of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Saccharomycetales|Rep: Kluyveromyces lactis
strain NRRL Y-1140 chromosome C of strain NRRL Y- 1140
of Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 78
Score = 52.8 bits (121), Expect = 2e-06
Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 9/67 (13%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 24
M +EI DIK+FL RR+D S +K N + KFK+R SR+LYTL++ D
Sbjct: 1 MAKEIADIKEFLELIRRQDVNSATVKINKKLNKNGKAFRQTKFKLRGSRYLYTLIVNDAG 60
Query: 23 KAEKLKQ 3
KA+KL Q
Sbjct: 61 KAKKLLQ 67
>UniRef50_P49167 Cluster: 60S ribosomal protein L38; n=8;
Fungi/Metazoa group|Rep: 60S ribosomal protein L38 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 78
Score = 50.8 bits (116), Expect = 6e-06
Identities = 33/67 (49%), Positives = 37/67 (55%), Gaps = 9/67 (13%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPE---------NVKFKVRCSRFLYTLVITDKE 24
M REI DIK FL RR D K+ +K N + KFKVR S LYTLVI D
Sbjct: 1 MAREITDIKQFLELTRRADVKTATVKINKKLNKAGKPFRQTKFKVRGSSSLYTLVINDAG 60
Query: 23 KAEKLKQ 3
KA+KL Q
Sbjct: 61 KAKKLIQ 67
>UniRef50_A5K4W1 Cluster: 60S ribosomal protein L38-1, putative;
n=4; Plasmodium|Rep: 60S ribosomal protein L38-1,
putative - Plasmodium vivax
Length = 93
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 7/64 (10%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSV-------KIKKNPENVKFKVRCSRFLYTLVITDKEKA 18
MP++I DI+ FL +R+ D +V K KKN K K+R ++LYT+V DK+KA
Sbjct: 1 MPKQITDIRKFLKISRKPDTTAVIIMKKKSKTKKNTIITKLKLRTKKYLYTMVFADKKKA 60
Query: 17 EKLK 6
E+++
Sbjct: 61 ERIE 64
>UniRef50_Q0D5N4 Cluster: Os07g0546700 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os07g0546700 protein -
Oryza sativa subsp. japonica (Rice)
Length = 94
Score = 44.0 bits (99), Expect = 7e-04
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = -3
Query: 177 HAA*NQRYQRLFN*GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 19
HA + R Q L GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 16 HAEADPRDQGLPPDGEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 68
>UniRef50_A0CD01 Cluster: Chromosome undetermined scaffold_169,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_169,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 177
Score = 43.2 bits (97), Expect = 0.001
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 10/65 (15%)
Frame = -1
Query: 176 MPREIKDIKDFLI-----KARRKDA-----KSVKIKKNPENVKFKVRCSRFLYTLVITDK 27
MP+EI+D+K+FL +A+ KDA K++ IK++ + KFK+R ++L+T DK
Sbjct: 1 MPKEIQDVKEFLSLMKGSEAQGKDANKEPKKNLYIKESKKITKFKLRGKKYLFTFKTADK 60
Query: 26 EKAEK 12
KA +
Sbjct: 61 NKASR 65
>UniRef50_P93679 Cluster: Ribosomal protein; n=1; Oryza sativa|Rep:
Ribosomal protein - Oryza sativa (Rice)
Length = 79
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/39 (46%), Positives = 29/39 (74%)
Frame = -3
Query: 135 GEEERRQIGQNKEEP*ECQVQGSMLKVPVHPGHH*QREG 19
GEEE R++G ++E+ QVQG++L+VP+HP +R+G
Sbjct: 15 GEEEGREVGADQEDQGRRQVQGALLQVPLHPLRLRRRQG 53
>UniRef50_Q9YFR9 Cluster: 50S ribosomal protein L38E; n=1; Aeropyrum
pernix|Rep: 50S ribosomal protein L38E - Aeropyrum
pernix
Length = 67
Score = 41.1 bits (92), Expect = 0.005
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLKQ 3
MP E+K +F+ R A ++K+ + VK K R R+LYTL + +++AE L+Q
Sbjct: 1 MPVELKSFDEFVKVVER--AVECRVKRGKDVVKIKARTKRYLYTLKVPPEKEAEVLEQ 56
>UniRef50_A2E8L9 Cluster: 60S ribosomal protein L38-1, putative;
n=1; Trichomonas vaginalis G3|Rep: 60S ribosomal protein
L38-1, putative - Trichomonas vaginalis G3
Length = 93
Score = 37.9 bits (84), Expect = 0.046
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Frame = -1
Query: 176 MPREIKDIKDFLIKARRKDAKSVKIKK-NPENVKFKVRCSRFLYTLVITDKEKAEKL 9
MP+++ + F+ + DAK+V I + N E KFK++ ++ LYTL + E +++
Sbjct: 1 MPKQVLTARQFVERCMAPDAKNVVILRVNDETAKFKLKTTKQLYTLTVKKGELIQQV 57
>UniRef50_Q22SV3 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 89
Score = 37.5 bits (83), Expect = 0.060
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = -1
Query: 176 MPREIKDIKDFL-IKARRKDA-------KSVKIKKNPENVKFKVRCSRFLYTLVITDKEK 21
MP+EI DIK F+ + KD K V +K N KFK+R ++LYT D +
Sbjct: 1 MPKEITDIKKFMKLWQNNKDTPATAGAKKVVYVKTNKRITKFKLRGKKYLYTFKTADPKI 60
Query: 20 AEKLK 6
A+ +K
Sbjct: 61 AKGIK 65
>UniRef50_Q55IY1 Cluster: Putative uncharacterized protein; n=2;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 162
Score = 33.9 bits (74), Expect = 0.75
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -2
Query: 79 SSRFDAQGSCTPWSSLTKRRLRNLSR 2
SSR DA +CTP S+T RRLR+ SR
Sbjct: 114 SSRSDAPSTCTPLFSMTLRRLRSSSR 139
>UniRef50_A5FP19 Cluster: Septum formation initiator; n=2;
Flavobacterium|Rep: Septum formation initiator -
Flavobacterium johnsoniae UW101
Length = 110
Score = 33.5 bits (73), Expect = 0.98
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 248 FVIIFFVKSVYF--SYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKF 75
+V++FFV + F +YS F+ E+KD K + + +KD + +K KNPE ++
Sbjct: 22 WVLLFFVIWMLFLDNYSYFDHRFLDGQINELKDNKKYYQEEIKKDQEQIKQLKNPEQIEK 81
Query: 74 KVRCSRFL 51
R F+
Sbjct: 82 YAREKYFM 89
>UniRef50_Q4Y2B8 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 127
Score = 32.3 bits (70), Expect = 2.3
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -1
Query: 248 FVIIFFVKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKV 69
F I+FF+ ++ Y F F ++IKD K K+ K +IKKN + +K K
Sbjct: 48 FTILFFLYPFFYIY-----FFKFLKEKKIKDTKKVRFGKHEKNKKQ-QIKKNTKVIKNKY 101
Query: 68 RCSR 57
C++
Sbjct: 102 MCAK 105
>UniRef50_Q76IK9 Cluster: Pol-like protein; n=8; Clupeocephala|Rep:
Pol-like protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 1148
Score = 31.9 bits (69), Expect = 3.0
Identities = 12/59 (20%), Positives = 32/59 (54%)
Frame = -1
Query: 182 FNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 6
F+ EIK++K ++ ++++ V ++ + ++ +C+R+ + +IT K+K
Sbjct: 335 FDFNNEIKEVKKEMLVLAEENSRGVILRAKEKKIEENEKCTRYFFKKIITKGGGISKIK 393
>UniRef50_Q600T7 Cluster: Putative uncharacterized protein; n=5;
Mycoplasma hyopneumoniae|Rep: Putative uncharacterized
protein - Mycoplasma hyopneumoniae (strain 232)
Length = 524
Score = 31.9 bits (69), Expect = 3.0
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -1
Query: 191 LFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRF 54
+F FN + IKDI+D + + R K + V + P N KF S F
Sbjct: 335 IFYFNYAKFIKDIEDLINRVRAKGQEFVNSIELPANEKFDNFVSNF 380
>UniRef50_Q4EBT3 Cluster: Ankyrin repeat domain protein; n=4;
Wolbachia|Rep: Ankyrin repeat domain protein - Wolbachia
endosymbiont of Drosophila ananassae
Length = 1094
Score = 31.5 bits (68), Expect = 4.0
Identities = 22/71 (30%), Positives = 34/71 (47%)
Frame = -1
Query: 230 VKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFL 51
+KSVY + LF+F+ RE KDI FL + D K + + K++ R +
Sbjct: 452 IKSVYRYFKDVKSLFIFDNAREYKDISKFLPLSLYPDYKKPYVLITSRDNKWEARGDIEV 511
Query: 50 YTLVITDKEKA 18
L I +K +A
Sbjct: 512 IKLDIFNKTEA 522
>UniRef50_Q4N7X6 Cluster: Putative uncharacterized protein; n=1;
Theileria parva|Rep: Putative uncharacterized protein -
Theileria parva
Length = 1506
Score = 31.5 bits (68), Expect = 4.0
Identities = 17/57 (29%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +3
Query: 147 VFDIFDFTR--HVEDE*FSTSTVREIYTFNEKNYHKSL*PRHFSFKGENIFYNRMKI 311
+F +F+F + H+ D+ F T++ ++I N+ +Y L R + KG+ ++NR++I
Sbjct: 1198 LFSVFNFFKYAHLLDDSFDTNS-KQIENINDLHYLSHLVLRVWRSKGDEGYFNRLEI 1253
>UniRef50_A5GSE8 Cluster: Permease of the major facilitator
superfamily; n=1; Synechococcus sp. RCC307|Rep: Permease
of the major facilitator superfamily - Synechococcus sp.
(strain RCC307)
Length = 522
Score = 31.1 bits (67), Expect = 5.3
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 72 LELDILRVLLYFDRFGVFPPRLN*KVFDIFDF 167
L ++ V+L+F RF PP LN KVF +F
Sbjct: 238 LTFSLIHVILFFIRFASSPPLLNPKVFSDINF 269
>UniRef50_Q3V2G4 Cluster: Adult male small intestine cDNA, RIKEN
full-length enriched library, clone:2010008K21
product:hypothetical protein, full insert sequence; n=3;
Euarchontoglires|Rep: Adult male small intestine cDNA,
RIKEN full-length enriched library, clone:2010008K21
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 71
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/57 (26%), Positives = 28/57 (49%)
Frame = -1
Query: 239 IFFVKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKV 69
+ F+ +F +S ++ P E + DF +K +R+ K K KKN + + K+
Sbjct: 10 VAFILLAFFIFSLFTLASIYTSPNERNEDDDFHLKEKRRKRKEFKGKKNCSDEEHKI 66
>UniRef50_A6CKF6 Cluster: Putative helicase; n=1; Bacillus sp.
SG-1|Rep: Putative helicase - Bacillus sp. SG-1
Length = 1049
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 144 KVFDIFDFTRHVEDE*FSTSTVREIYTFNEKNYH 245
K DIF T + ++ FS ST+ E Y NEK +H
Sbjct: 931 KNLDIFFITLNKSEKDFSPSTLYEDYAINEKLFH 964
>UniRef50_A0EFV2 Cluster: Chromosome undetermined scaffold_94, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_94,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 650
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/51 (29%), Positives = 30/51 (58%)
Frame = -1
Query: 230 VKSVYFSYSAG*KLFVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVK 78
V+S + +Y+ G KLF++++ K I+ LIK K + + ++ N + +K
Sbjct: 65 VESTFLTYNVGNKLFLYHLASHQKIIQSTLIKNSDKITQMLLVQVNVKIIK 115
>UniRef50_Q7RWI3 Cluster: DNA-directed RNA polymerase; n=4;
Pezizomycotina|Rep: DNA-directed RNA polymerase -
Neurospora crassa
Length = 1674
Score = 30.7 bits (66), Expect = 6.9
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = -1
Query: 188 FVFNMPREIKDIKDFLIKARRKDAKSVKIKKNPENVKFKVRCSRFLYTLV 39
F M + +K+ KD LIK ++ D+ + ++KN E K+ ++++ +LV
Sbjct: 1134 FFEKMTKYVKENKDGLIKEKKGDSSGIIVRKNAE----KILAAKYIRSLV 1179
>UniRef50_Q82RE7 Cluster: Putative uncharacterized protein; n=3;
Streptomyces|Rep: Putative uncharacterized protein -
Streptomyces avermitilis
Length = 606
Score = 30.3 bits (65), Expect = 9.2
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 196 QPAL*EKYTLLTKKIITNHFNHGT 267
QPAL E LLT +++TN F HG+
Sbjct: 60 QPALVETAELLTTELVTNAFRHGS 83
>UniRef50_A6ATM9 Cluster: Sel1 repeat family; n=7; Vibrio|Rep: Sel1
repeat family - Vibrio harveyi HY01
Length = 326
Score = 30.3 bits (65), Expect = 9.2
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 107 KIKKNPENVKFKVRCSRFLYTLVITDKEKAEKLK 6
KIK PEN K + C+ F YT KA KL+
Sbjct: 257 KIKGQPENQKLLIACAMFGYTPQTIPDSKAVKLR 290
>UniRef50_Q7SE76 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 1007
Score = 30.3 bits (65), Expect = 9.2
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = -2
Query: 139 LRRGGKTPNRSK*RRTLRMSSSRFDAQGSCTPWSSLTKRRLRNLSR 2
L+ G +TP RS + + RMS SR DA+ + SS++ S+
Sbjct: 280 LKEGDQTPERSDSKSSNRMSRSRSDARSKLSKVSSVSSEATETQSQ 325
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 306,513,044
Number of Sequences: 1657284
Number of extensions: 5276465
Number of successful extensions: 11757
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 11526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11739
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 10703468375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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