Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e16r
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   2.3  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   5.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    21   9.5  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 498 DKTFDFFKNPDYYSCPSPRR 557
           D  F+ + NP YY+   P R
Sbjct: 81  DNHFEQYPNPTYYNLADPAR 100


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +3

Query: 552 RRILDSYKSSMHLGESYTLPRFF 620
           R+ LD  KS ++   S+T  RFF
Sbjct: 280 RKNLDVMKSFVNFRPSFTAARFF 302


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 88  QERIHNYNYEKICLRNK*KKS 26
           Q+ I  YN+E++C  NK K++
Sbjct: 237 QQIIARYNFERLC--NKLKRA 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,480
Number of Sequences: 336
Number of extensions: 3030
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)