Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e16f
(636 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI00006CB722 Cluster: hypothetical protein TTHERM_0049... 36 1.1
UniRef50_A0BQ88 Cluster: Chromosome undetermined scaffold_120, w... 36 1.1
UniRef50_Q4T828 Cluster: Chromosome undetermined SCAF7910, whole... 34 3.3
UniRef50_Q3VK95 Cluster: Radical SAM; n=1; Pelodictyon phaeoclat... 34 3.3
UniRef50_Q2SF67 Cluster: Uncharacterized conserved protein; n=12... 33 4.4
UniRef50_Q0C681 Cluster: Putative uncharacterized protein; n=1; ... 33 4.4
UniRef50_UPI0000397489 Cluster: COG5283: Phage-related tail prot... 33 5.8
UniRef50_A7F4C7 Cluster: Predicted protein; n=1; Sclerotinia scl... 33 5.8
UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep: T... 33 5.8
UniRef50_UPI0000E82356 Cluster: PREDICTED: hypothetical protein,... 33 7.6
UniRef50_Q19151 Cluster: Amino acid transporter protein 2; n=1; ... 33 7.6
>UniRef50_UPI00006CB722 Cluster: hypothetical protein
TTHERM_00494830; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00494830 - Tetrahymena
thermophila SB210
Length = 402
Score = 35.5 bits (78), Expect = 1.1
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Frame = +2
Query: 122 KMTKTNRVFNRQ-ARRIIYNVHSFMKRESEDGVINIKKVQKRTAMATDSSVATVKRIIQE 298
K+++T V + Q A+R+ +S + ++ +I+IKK ++ +T+ S+++VK + Q
Sbjct: 243 KLSQTGNVNDSQYAKRMNSMNNSTFQNKTNTSIIDIKKAAEKKLNSTNLSISSVKSLSQS 302
Query: 299 GGGELPKIFRTPGKKRP 349
G P P +K P
Sbjct: 303 KLGMPPPFSEFPEQKNP 319
>UniRef50_A0BQ88 Cluster: Chromosome undetermined scaffold_120, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_120, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 2467
Score = 35.5 bits (78), Expect = 1.1
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 313 ELSAAFLYYTLYSSDRTIRCHCGSLLYFFYINHPVFRFSLHKGMNVINNSSSLSIEH 143
+L+ LYY+LY D ++ + LLYF YIN F + + + NS L+ ++
Sbjct: 1491 KLNRITLYYSLYIGDDGVQKYVNDLLYFEYINIERFEVQVTNWNDAMTNSLCLAAQN 1547
>UniRef50_Q4T828 Cluster: Chromosome undetermined SCAF7910, whole
genome shotgun sequence; n=8; Euteleostomi|Rep:
Chromosome undetermined SCAF7910, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 989
Score = 33.9 bits (74), Expect = 3.3
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = -1
Query: 420 WKLCIHRLITPRSIEFKPVIGLSRGLFFPGVLNI 319
W C RL+ P S+ +GL +GL PGV+N+
Sbjct: 659 WLYCRPRLLAPGSLPALTALGLRQGLHHPGVVNL 692
>UniRef50_Q3VK95 Cluster: Radical SAM; n=1; Pelodictyon
phaeoclathratiforme BU-1|Rep: Radical SAM - Pelodictyon
phaeoclathratiforme BU-1
Length = 525
Score = 33.9 bits (74), Expect = 3.3
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 18/111 (16%)
Frame = +2
Query: 353 DKPITGLNSIDLGVIKRCIHNFHITEKEL-PTTEKLRIKL----KNDINFQGSAR----- 502
D P NSI+ + K IHNF E+ + P T K KL +INF+G R
Sbjct: 303 DNPTHVFNSINESIQKYNIHNFSFVEETMHPKTIKEIAKLVAESNININFEGYIRFESIW 362
Query: 503 ---SLGRIIKNLGFK-----WKKIQNNKQILIERTDIRFQRIEYLQRMMKY 631
SL ++ N G K + I N + + + D Q +E+L++ KY
Sbjct: 363 LNDSLLLLLSNSGLKKVFIGMELISNKNRNNLNKNDNANQIVEFLKKFKKY 413
>UniRef50_Q2SF67 Cluster: Uncharacterized conserved protein; n=12;
Proteobacteria|Rep: Uncharacterized conserved protein -
Hahella chejuensis (strain KCTC 2396)
Length = 126
Score = 33.5 bits (73), Expect = 4.4
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 212 GVINIKKVQKRTAMATDS-SVATVKRIIQEGGGELPKIFRTPGKKRPRDKPITGLNSIDL 388
G N+ ++ A+A D +A + I GGG P + K +PI ++ L
Sbjct: 15 GCSNVAQLANNAAVAMDRRGLAEMSCISGVGGGVKPLV-----KVACSGRPIVAVDGCLL 69
Query: 389 GVIKRCIHNFHITEK 433
G +K+C++N ++T K
Sbjct: 70 GCVKQCLNNLNVTPK 84
>UniRef50_Q0C681 Cluster: Putative uncharacterized protein; n=1;
Hyphomonas neptunium ATCC 15444|Rep: Putative
uncharacterized protein - Hyphomonas neptunium (strain
ATCC 15444)
Length = 342
Score = 33.5 bits (73), Expect = 4.4
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +2
Query: 185 SFMKRESEDGVINIKKVQKRTAMATDSSVATVKRIIQEGGGELPKIFRTPGKK 343
S + + D +N Q+R D A+++ ++Q GG+ P+ ++TP K+
Sbjct: 92 SLILEDYADEWLNKAMFQQRWGQMPDRDAASIRVLVQINGGKRPRAYKTPAKQ 144
>UniRef50_UPI0000397489 Cluster: COG5283: Phage-related tail
protein; n=1; Haemophilus somnus 2336|Rep: COG5283:
Phage-related tail protein - Haemophilus somnus 2336
Length = 805
Score = 33.1 bits (72), Expect = 5.8
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Frame = +2
Query: 371 LNSIDLGVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKI 550
L+++D G+IK + +F E LPT K+ + + D N G+ L +++KN GFK + +
Sbjct: 212 LSALD-GMIKNGL-SFDQAEATLPTAMKMMVAGQTDGNQVGA---LLQVLKNYGFKGEDL 266
Query: 551 QNNKQILIER-TDIRFQRIEYLQRM 622
Q ++ ++ D +F+ + +Q +
Sbjct: 267 QKALEVTLQSGFDGKFEVSDMIQHL 291
>UniRef50_A7F4C7 Cluster: Predicted protein; n=1; Sclerotinia
sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
sclerotiorum 1980
Length = 470
Score = 33.1 bits (72), Expect = 5.8
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = +2
Query: 425 TEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQILIE 577
T+ + TTE+L +L N++ S + K WK+++N K++++E
Sbjct: 98 TKSRIQTTEQLEQELNNELGRNASTLFQQEVEKERQVHWKEMENLKKVILE 148
>UniRef50_Q27896 Cluster: TBP-related factor; n=4; Diptera|Rep:
TBP-related factor - Drosophila melanogaster (Fruit fly)
Length = 224
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 GVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQI 568
GVI R +H+ T T + + +N+I +R RI++ LGF K ++ Q
Sbjct: 85 GVIMR-MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQN 143
Query: 569 LIERTDIRFQ-RIEYLQRM 622
++ D+RF R+E L +
Sbjct: 144 IVATVDLRFPIRLENLNHV 162
>UniRef50_UPI0000E82356 Cluster: PREDICTED: hypothetical protein,
partial; n=4; Gallus gallus|Rep: PREDICTED: hypothetical
protein, partial - Gallus gallus
Length = 538
Score = 32.7 bits (71), Expect = 7.6
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLYFFYINHPVFRFSLHKG 185
P C + FR S L++ +++ +R +CH CG F +H + +HKG
Sbjct: 376 PECGKSFRISSYLILHHRIHTGERPFQCHDCGK--RFKRSSHLIHHQRIHKG 425
>UniRef50_Q19151 Cluster: Amino acid transporter protein 2; n=1;
Caenorhabditis elegans|Rep: Amino acid transporter
protein 2 - Caenorhabditis elegans
Length = 483
Score = 32.7 bits (71), Expect = 7.6
Identities = 15/47 (31%), Positives = 28/47 (59%)
Frame = -1
Query: 624 IIRCRYSILWKRISVLSIRICLLFWIFFHLKPKFLMIRPKLRADPWK 484
+++ R+++ ++ I+I LL+ I F L FL+I P +DPW+
Sbjct: 385 LLKLRFTMPENVLNARPIKISLLWPILFFLMCLFLLILPFFHSDPWE 431
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 602,893,566
Number of Sequences: 1657284
Number of extensions: 11997784
Number of successful extensions: 30972
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 30070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30964
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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