Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e16f
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.70 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   6.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.6  
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    21   8.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 8/24 (33%), Positives = 15/24 (62%)
 Frame = -3

Query: 232 FFYINHPVFRFSLHKGMNVINNSS 161
           F+ +NHPV+    H G + + N++
Sbjct: 434 FYKMNHPVYHKDPHYGFHNVTNTT 457


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 56  IVQFY*PYIFYQAHLIIYC 112
           I  FY  +I +  HL+ YC
Sbjct: 212 IYYFYSAFIIFTIHLLFYC 230


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +2

Query: 5   YDWVSVLCTRITAAKYIIVQ 64
           + W+ +L TR+ A  Y I+Q
Sbjct: 546 HPWIPLLDTRLQAIIYPIIQ 565


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -3

Query: 196 LHKGMNVINNSSSLSIEHSVCLCHFATK 113
           L +GMN ++       +H   +CH  T+
Sbjct: 116 LREGMNSLSRVLKSIEKHQGAVCHLETR 143


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRC 254
           P C   F + S+   +   +S +R  RC
Sbjct: 53  PVCDRRFSQSSSVTTHMRTHSGERPYRC 80


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -3

Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRC 254
           P C   F + S+   +   +S +R  RC
Sbjct: 309 PVCDRRFSQSSSVTTHMRTHSGERPYRC 336


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 163 SSLSIEHSVCLCHFATKTI 107
           S+L   + VC+CH    TI
Sbjct: 915 STLYTANVVCICHVCYSTI 933


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +1

Query: 28   YAHHCSKIHY 57
            Y HH SK+H+
Sbjct: 1069 YRHHLSKMHF 1078


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,251
Number of Sequences: 336
Number of extensions: 3315
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)