Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e16f
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 4.5
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 4.5
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 4.5
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 4.5
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 4.5
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 4.5
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 4.5
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 4.5
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 4.5
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 4.5
D31763-1|BAA06541.1| 848|Homo sapiens KIAA0065 protein. 30 7.9
BC126119-1|AAI26120.1| 811|Homo sapiens ZNF33A protein protein. 30 7.9
BC107726-1|AAI07727.1| 606|Homo sapiens ZNF33B protein protein. 30 7.9
AY184389-1|AAO24702.1| 810|Homo sapiens zinc finger ZAK-associa... 30 7.9
AL161931-1|CAH69953.1| 810|Homo sapiens zinc finger protein 33A... 30 7.9
AL117337-4|CAH73315.1| 810|Homo sapiens zinc finger protein 33A... 30 7.9
AL022345-3|CAI23623.1| 778|Homo sapiens zinc finger protein 33B... 30 7.9
AJ491697-1|CAD36956.1| 778|Homo sapiens zinc finger protein 33b... 30 7.9
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 476 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 526
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 366 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 416
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 408
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 408
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 408
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 394 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 444
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 476 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 526
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 358 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 408
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 394 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 444
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 4.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 434 ELPTTEKLRIKLKNDI--NFQGSARSLGRIIKNLGFKWKKIQNNKQILIER 580
ELP +LR K +I + SA L RI+KNL F K N + I++
Sbjct: 476 ELPAPRRLRWKCSPEIQGHLASSAEKLQRIVKNLDFIVYKFDNYGKTFIKK 526
>D31763-1|BAA06541.1| 848|Homo sapiens KIAA0065 protein.
Length = 848
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 593 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 628
>BC126119-1|AAI26120.1| 811|Homo sapiens ZNF33A protein protein.
Length = 811
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 556 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 591
>BC107726-1|AAI07727.1| 606|Homo sapiens ZNF33B protein protein.
Length = 606
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 556 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 591
>AY184389-1|AAO24702.1| 810|Homo sapiens zinc finger ZAK-associated
protein protein.
Length = 810
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 555 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 590
>AL161931-1|CAH69953.1| 810|Homo sapiens zinc finger protein 33A
protein.
Length = 810
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 555 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 590
>AL117337-4|CAH73315.1| 810|Homo sapiens zinc finger protein 33A
protein.
Length = 810
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 555 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 590
>AL022345-3|CAI23623.1| 778|Homo sapiens zinc finger protein 33B
protein.
Length = 778
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 556 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 591
>AJ491697-1|CAD36956.1| 778|Homo sapiens zinc finger protein 33b
protein.
Length = 778
Score = 29.9 bits (64), Expect = 7.9
Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -3
Query: 337 PRCSEYFRELSAAFLYYTLYSSDRTIRCH-CGSLLY 233
P C ++F S +Y ++ ++ CH CG + Y
Sbjct: 556 PECGKFFSHKSTLSQHYRTHTGEKPYECHECGKIFY 591
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,381,728
Number of Sequences: 237096
Number of extensions: 1830993
Number of successful extensions: 8999
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8999
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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