Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e16f
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related fa... 33 0.32
X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related fa... 33 0.32
AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p pro... 33 0.32
AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA... 33 0.32
BT001629-1|AAN71384.1| 805|Drosophila melanogaster RE37929p pro... 31 1.3
AE014297-4755|AAN14274.1| 833|Drosophila melanogaster CG1499-PB... 31 1.3
AE014297-4754|AAF57159.1| 833|Drosophila melanogaster CG1499-PA... 31 1.3
X53417-1|CAA37496.1| 508|Drosophila melanogaster protein ( Dros... 29 7.0
X52591-1|CAA36827.1| 507|Drosophila melanogaster protein ( Dros... 29 7.0
AY069393-1|AAL39538.1| 508|Drosophila melanogaster LD09973p pro... 29 7.0
AL031765-3|CAA21122.1| 508|Drosophila melanogaster EG:22E5.1,FB... 29 7.0
AE014298-312|AAF45707.1| 508|Drosophila melanogaster CG4380-PA ... 29 7.0
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 28 9.2
BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p pro... 28 9.2
AY102684-1|AAM27513.1| 872|Drosophila melanogaster LD24134p pro... 28 9.2
AE014297-1234|AAF54579.2| 872|Drosophila melanogaster CG6621-PA... 28 9.2
>X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 GVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQI 568
GVI R +H+ T T + + +N+I +R RI++ LGF K ++ Q
Sbjct: 85 GVIMR-MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQN 143
Query: 569 LIERTDIRFQ-RIEYLQRM 622
++ D+RF R+E L +
Sbjct: 144 IVATVDLRFPIRLENLNHV 162
>X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 GVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQI 568
GVI R +H+ T T + + +N+I +R RI++ LGF K ++ Q
Sbjct: 85 GVIMR-MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQN 143
Query: 569 LIERTDIRFQ-RIEYLQRM 622
++ D+RF R+E L +
Sbjct: 144 IVATVDLRFPIRLENLNHV 162
>AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p
protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 GVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQI 568
GVI R +H+ T T + + +N+I +R RI++ LGF K ++ Q
Sbjct: 85 GVIMR-MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQN 143
Query: 569 LIERTDIRFQ-RIEYLQRM 622
++ D+RF R+E L +
Sbjct: 144 IVATVDLRFPIRLENLNHV 162
>AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA
protein.
Length = 224
Score = 33.1 bits (72), Expect = 0.32
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 389 GVIKRCIHNFHITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQI 568
GVI R +H+ T T + + +N+I +R RI++ LGF K ++ Q
Sbjct: 85 GVIMR-MHSPRCTALIFRTGKVICTGARNEIEADIGSRKFARILQKLGFPVKFMEYKLQN 143
Query: 569 LIERTDIRFQ-RIEYLQRM 622
++ D+RF R+E L +
Sbjct: 144 IVATVDLRFPIRLENLNHV 162
>BT001629-1|AAN71384.1| 805|Drosophila melanogaster RE37929p
protein.
Length = 805
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 260 DSSVATVKRIIQEGGGELPKIFRTPGKKRPRDK 358
D VATV GGGELPK TP + +P K
Sbjct: 71 DQEVATVGSAALAGGGELPKPLVTPIEAQPEAK 103
>AE014297-4755|AAN14274.1| 833|Drosophila melanogaster CG1499-PB,
isoform B protein.
Length = 833
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 260 DSSVATVKRIIQEGGGELPKIFRTPGKKRPRDK 358
D VATV GGGELPK TP + +P K
Sbjct: 71 DQEVATVGSAALAGGGELPKPLVTPIEAQPEAK 103
>AE014297-4754|AAF57159.1| 833|Drosophila melanogaster CG1499-PA,
isoform A protein.
Length = 833
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 260 DSSVATVKRIIQEGGGELPKIFRTPGKKRPRDK 358
D VATV GGGELPK TP + +P K
Sbjct: 71 DQEVATVGSAALAGGGELPKPLVTPIEAQPEAK 103
>X53417-1|CAA37496.1| 508|Drosophila melanogaster protein (
Drosophila mRNA for XR2C. ).
Length = 508
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 214 PVFRFSLHKGMNVINNSSSLSIEHSVCLCHFATKTINN*MSLIKNVWLIKLHNNVFCCS 38
P ++ ++ V+N +E++ + HFA +++ + L+K W+ L NV CS
Sbjct: 272 PDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS 330
>X52591-1|CAA36827.1| 507|Drosophila melanogaster protein (
Drosophila melanogastermRNA for steroid hormone
receptor-like gene.).
Length = 507
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 214 PVFRFSLHKGMNVINNSSSLSIEHSVCLCHFATKTINN*MSLIKNVWLIKLHNNVFCCS 38
P ++ ++ V+N +E++ + HFA +++ + L+K W+ L NV CS
Sbjct: 272 PDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS 330
>AY069393-1|AAL39538.1| 508|Drosophila melanogaster LD09973p
protein.
Length = 508
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 214 PVFRFSLHKGMNVINNSSSLSIEHSVCLCHFATKTINN*MSLIKNVWLIKLHNNVFCCS 38
P ++ ++ V+N +E++ + HFA +++ + L+K W+ L NV CS
Sbjct: 272 PDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS 330
>AL031765-3|CAA21122.1| 508|Drosophila melanogaster
EG:22E5.1,FBgn0003964;usp protein.
Length = 508
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 214 PVFRFSLHKGMNVINNSSSLSIEHSVCLCHFATKTINN*MSLIKNVWLIKLHNNVFCCS 38
P ++ ++ V+N +E++ + HFA +++ + L+K W+ L NV CS
Sbjct: 272 PDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS 330
>AE014298-312|AAF45707.1| 508|Drosophila melanogaster CG4380-PA
protein.
Length = 508
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = -3
Query: 214 PVFRFSLHKGMNVINNSSSLSIEHSVCLCHFATKTINN*MSLIKNVWLIKLHNNVFCCS 38
P ++ ++ V+N +E++ + HFA +++ + L+K W+ L NV CS
Sbjct: 272 PDYKGAVSALCQVVNKQLFQMVEYARMMPHFAQVPLDDQVILLKAAWIELLIANVAWCS 330
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +2
Query: 419 HITEKELPTTEKLRIKLKNDINFQGSARSLGRIIKNLGFKWKKIQNNKQILIE 577
H+TEK + +K I +K+D N ++ G I + + ++ KQIL++
Sbjct: 647 HLTEKPINYFKKQIIFIKSDKNKVEHSKIFGNSITTIQYDVMTLEKAKQILLD 699
>BT015177-1|AAT94406.1| 1462|Drosophila melanogaster SD19814p protein.
Length = 1462
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 203 SEDGVINIKKVQKRTAMATDSSVATVKRIIQEGGGELPKIFRTPGKKRPR 352
S G +I K+++ + S + +V R +LPK TP K+RP+
Sbjct: 896 SSPGSADISKIEQNIDLIVKSPLVSVLRKSGNVADKLPKEQTTPTKQRPK 945
>AY102684-1|AAM27513.1| 872|Drosophila melanogaster LD24134p
protein.
Length = 872
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 194 KRESEDGVINIKKVQKRTAMATDSSVATVKRIIQEGGGELPKIFRTPGKKRPRDKP 361
K E+ED + +KK+ + A+ D+ + R +E ++ + GK+ P P
Sbjct: 539 KSETEDPIELLKKIDFQEALRQDNKLMNSTRSDEERKAKIKSYLKEGGKESPPPPP 594
>AE014297-1234|AAF54579.2| 872|Drosophila melanogaster CG6621-PA
protein.
Length = 872
Score = 28.3 bits (60), Expect = 9.2
Identities = 14/56 (25%), Positives = 27/56 (48%)
Frame = +2
Query: 194 KRESEDGVINIKKVQKRTAMATDSSVATVKRIIQEGGGELPKIFRTPGKKRPRDKP 361
K E+ED + +KK+ + A+ D+ + R +E ++ + GK+ P P
Sbjct: 539 KSETEDPIELLKKIDFQEALRQDNKLMNSTRSDEERKAKIKSYLKEGGKESPPPPP 594
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,854,280
Number of Sequences: 53049
Number of extensions: 539885
Number of successful extensions: 1235
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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