Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e14r
(642 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 57 9e-09
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 52 3e-07
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 52 4e-07
Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like... 37 0.011
AF098996-1|AAM34815.1| 523|Caenorhabditis elegans Hypothetical ... 31 0.53
Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical pr... 29 2.1
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 29 2.1
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF067220-2|AAC16978.1| 588|Caenorhabditis elegans Hypothetical ... 28 4.9
Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical pr... 28 6.5
AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical ... 28 6.5
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 57.2 bits (132), Expect = 9e-09
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 6/165 (3%)
Frame = -1
Query: 501 GTRVETSSIVMHPNWSPATIRN-DVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSA 325
G+ +++ +HP ++ + D A++ + PV S T I LPS ++
Sbjct: 122 GSPHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLPAVENRL----C 177
Query: 324 VASGFGLTSSSGSITTNQVLSHVNLDVINNFVCTFAFPFVLQ---SSNLCTS-GRGGVGT 157
V +G+G T S++ L +++ +++ C+ ++ + S LC G + +
Sbjct: 178 VVTGWGSTIEGSSLSA-PTLREIHVPLLSTLFCSSLPNYIGRIHLPSMLCAGYSYGKIDS 236
Query: 156 CRGDSGGPLVVTRNNRPILIGITSFGSGLGC-QVNLPAAYARVTS 25
C+GDSGGPL+ R+ L G+ S+ G+GC + +P Y V S
Sbjct: 237 CQGDSGGPLMCARDGHWELTGVVSW--GIGCARPGMPGVYGNVHS 279
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 5/146 (3%)
Frame = -1
Query: 438 NDVAVIYLPSP-VTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLS 262
+D+A++ +P P + ++ I LPS + G V SG+G S + + L
Sbjct: 116 HDIAILEIPYPGIEFNEYAQPICLPSKDFVYTP--GRQCVVSGWG----SMGLRYAERLQ 169
Query: 261 HVNLDVINNFVCTFAFPFV--LQSSNLCTSG-RGGVGTCRGDSGGPLVVTRNNRP-ILIG 94
+ +IN F C + + S C GG+ +C+GDSGGP R + +L G
Sbjct: 170 AALIPIINRFDCVNSSQIYSSMSRSAFCAGYLEGGIDSCQGDSGGPFACRREDGAFVLAG 229
Query: 93 ITSFGSGLGCQVNLPAAYARVTSFMN 16
+ S+G G Q P Y V +++
Sbjct: 230 VISWGDGC-AQKKQPGIYTMVAPYLS 254
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 52.0 bits (119), Expect = 4e-07
Identities = 44/166 (26%), Positives = 81/166 (48%), Gaps = 15/166 (9%)
Frame = -1
Query: 471 MHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLT--- 301
+H ++ T ND+A++ + S ++ + +L + + + V G+GLT
Sbjct: 112 IHSGYNNQTADNDIALLRISSDLSKLGIKPVCLVHDDSKLLKQY--KNGVVIGYGLTLGE 169
Query: 300 SSSGS--ITTNQVLSHVNLDVINNFVCTFAFPFVLQSSNLCT-----SGRGGVGTCRGDS 142
SSG + +Q L ++ +I++ C + F+ S T +G GT GDS
Sbjct: 170 DSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKITGYQICAGAYLHGTAPGDS 229
Query: 141 GGPLVVTRNN-RPILIGITSFGS----GLGCQVNLPAAYARVTSFM 19
GGPL++ ++N + IGITS+G+ G+ Q P Y R++ ++
Sbjct: 230 GGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISKYV 275
>Z92832-5|CAB07374.2| 292|Caenorhabditis elegans Hypothetical
protein F31D4.6 protein.
Length = 292
Score = 44.8 bits (101), Expect = 5e-05
Identities = 39/150 (26%), Positives = 65/150 (43%), Gaps = 5/150 (3%)
Frame = -1
Query: 438 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 259
+D A++ + + S+ + I LP + S G+G + +++
Sbjct: 143 HDWAIVEVEKRIHFSENVRPICLPR----PNMYYTKSLAVPGWGRIFNESGPLIHEIPMR 198
Query: 258 VNLDVINNF---VCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNN--RPILIG 94
++ D + + A F+ +S + S TC GDSGG L +N R LI
Sbjct: 199 IDRDCKRPWSDRLPADADDFICATS-MNVSNYSAPRTCHGDSGGGLEYRDDNYGRAFLIA 257
Query: 93 ITSFGSGLGCQVNLPAAYARVTSFMNSSIN 4
ITSFG+ GC N+ A + RV ++N N
Sbjct: 258 ITSFGT-RGCPSNMLARFTRVDMYLNLICN 286
>U39848-2|AAT81211.1| 279|Caenorhabditis elegans Hypothetical
protein B0286.6 protein.
Length = 279
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 2/127 (1%)
Frame = -1
Query: 438 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 259
ND+AV L P+ S I LPS ++ +G+ L G ++ VL
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLPSAPKIPR------IRETGYKLFGY-GRDPSDSVLES 173
Query: 258 VNLDVINNFV--CTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNNRPILIGITS 85
L + +FV C+ FP+ CTS +C GDSG +V T + R + + +
Sbjct: 174 GKLKSLYSFVAECSDDFPY---GGVYCTSAVNRGLSCDGDSGSGVVRTSDTRNVQVLVGV 230
Query: 84 FGSGLGC 64
+G+ C
Sbjct: 231 LSAGMPC 237
>AF003384-12|AAB54236.2| 331|Caenorhabditis elegans Trypsin-like
protease protein 5 protein.
Length = 331
Score = 37.1 bits (82), Expect = 0.011
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Frame = -1
Query: 438 NDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSH 259
ND+ ++ L S + + N LP L E + S A + FG S G N
Sbjct: 176 NDIVILELESTIDDVEGANYACLPF---LPEVNIQSGANVTSFGWGSDPGKGFDNAAFPM 232
Query: 258 VNLDVINN---FVCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNN--RPILIG 94
+ + + C + + + CT+ C GDSGG L +++ R +I
Sbjct: 233 IQVLTLATETLATCEENWGTSIPFDSFCTAEEEDKNVCSGDSGGGLTFHQSDSAREFIIA 292
Query: 93 ITSFGS 76
I S+GS
Sbjct: 293 IVSYGS 298
>AF098996-1|AAM34815.1| 523|Caenorhabditis elegans Hypothetical
protein T11F1.7 protein.
Length = 523
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/29 (55%), Positives = 21/29 (72%)
Frame = -1
Query: 315 GFGLTSSSGSITTNQVLSHVNLDVINNFV 229
G+G TSS SIT N L+ N+DVI+NF+
Sbjct: 115 GYGCTSSGLSITNNSQLT--NIDVISNFL 141
>Z70684-8|CAA94603.2| 360|Caenorhabditis elegans Hypothetical
protein F28D1.8 protein.
Length = 360
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/75 (22%), Positives = 28/75 (37%)
Frame = -1
Query: 501 GTRVETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINTIALPSGQELQENFVGSSAV 322
G R ++ PN + D V P+P + T + G E V +
Sbjct: 187 GNRSTIMILLQKPNTMKEKEKEDQKVSNNPAPAASASTEGATTVTEGTTAAETTVATETT 246
Query: 321 ASGFGLTSSSGSITT 277
A+G G T ++ + T
Sbjct: 247 ATGTGTTEAAATTVT 261
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 29.5 bits (63), Expect = 2.1
Identities = 29/136 (21%), Positives = 58/136 (42%)
Frame = -1
Query: 417 LPSPVTLSDTINTIALPSGQELQENFVGSSAVASGFGLTSSSGSITTNQVLSHVNLDVIN 238
+ SP T + + + + +E+F S+ ++G SSS S + ++ ++ N
Sbjct: 233 MKSPATTGGSFGSSTVVASIRSEESFGIKSSASAGGSFNSSSASASQSRTVASFGSKPSN 292
Query: 237 NFVCTFAFPFVLQSSNLCTSGRGGVGTCRGDSGGPLVVTRNNRPILIGITSFGSGLGCQV 58
+ + + L SS+ C + + T G S G + +++P SFG G
Sbjct: 293 ENISSNS--SALSSSSSCFAAK-PTSTSAGGSFGNQPSSFSSKP------SFGGAFGAST 343
Query: 57 NLPAAYARVTSFMNSS 10
++ + + SF N S
Sbjct: 344 SVTGSSSMGGSFGNKS 359
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 4.9
Identities = 38/162 (23%), Positives = 57/162 (35%), Gaps = 9/162 (5%)
Frame = -1
Query: 504 GGTRV--ETSSIVMHPNWSPATIRNDVAVIYLPSPVTLSDTINT---IALPSGQELQENF 340
G T++ T S V P+ + + S T +++T I+ + Q + N
Sbjct: 1153 GSTQIPGSTGSTVTQPSTGSGSTSTSGEITSQGSTQTPRSSLSTSPAISTSTQQSVSTNS 1212
Query: 339 VGSSAVASGF--GLTSSSGSITTNQV--LSHVNLDVINNFVCTFAFPFVLQSSNLCTSGR 172
GS+ G TSS ++TT S + + P QS N TSG
Sbjct: 1213 PGSTVTQPSTVRGSTSSGSTVTTGSTEGSSTSGSSSATSLSSSSPVPSTSQSPNPSTSGS 1272
Query: 171 GGVGTCRGDSGGPLVVTRNNRPILIGITSFGSGLGCQVNLPA 46
S P+V T G T S +G V P+
Sbjct: 1273 STPTPNPSQSTSPVVSTTTGEMTSHGSTQTPSTIGSTVTQPS 1314
>AF067220-2|AAC16978.1| 588|Caenorhabditis elegans Hypothetical
protein C33E10.5 protein.
Length = 588
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +2
Query: 26 DVTRAYAAGKFTWQPRPEPNDVIPIKIGRLFLVTTRGPPESPRQVPTPPR 175
+V R A W+ PN + I+ LF V++ GP S R + PR
Sbjct: 309 NVCRMEAMFSLWWETPCVPNVIPRIEPAMLFPVSSSGPSSSERDISPLPR 358
>Z83237-6|CAE17879.1| 549|Caenorhabditis elegans Hypothetical
protein R06B9.6 protein.
Length = 549
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 455 LLLPFVMMWPSFTYPVPLLCLIQSIR 378
++L F + W S TY +P L LI +R
Sbjct: 285 VILDFPIEWISLTYRIPFLLLISDLR 310
>AF040650-4|AAB95009.2| 291|Caenorhabditis elegans Hypothetical
protein T04B8.3 protein.
Length = 291
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 155 QVPTPPRPLVHKFEDCKTKGKANVQTKLFITSRFT 259
++ P PL H + + K KGK +V + T +FT
Sbjct: 188 ELEAEPFPLYHIYGNTKAKGKMHVLVAPYSTQKFT 222
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,273,554
Number of Sequences: 27780
Number of extensions: 354814
Number of successful extensions: 1279
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1276
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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