Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e14f
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    44   2e-06
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   2.4  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   2.4  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    23   2.4  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           21   9.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   9.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 43.6 bits (98), Expect = 2e-06
 Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 7/138 (5%)
 Frame = +1

Query: 172 TRIVGGSPATLGQFPYQGGLLITIVVNGQPRTGVCGASLVTTNRLLTAAHCWFD-GTNQX 348
           +RIVGG+   + +FP   G+  T     +P   +CGA++++   +LTAAHC  D  T + 
Sbjct: 159 SRIVGGTNTGINEFPMMAGIKRTY----EPGM-ICGATIISKRYVLTAAHCIIDENTTKL 213

Query: 349 XXXXXXXXXXXXFSGGTRV--ETSSIVMHPNWSPATIR----NDVAVIYLPSPVTLSDTI 510
                             V    + +++HP +          ND+A++     +   D +
Sbjct: 214 AIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKV 273

Query: 511 NTIALPSGQELQENFVGS 564
               LP  Q   ++F GS
Sbjct: 274 GPACLPF-QHFLDSFAGS 290


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 103 YLTKYGVPEAERIRKAEEAGLSN 171
           YLTK+ VPE       E+ GL++
Sbjct: 208 YLTKHNVPEQRLNYFTEDVGLNH 230


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 103 YLTKYGVPEAERIRKAEEAGLSN 171
           YLTK+ VPE       E+ GL++
Sbjct: 208 YLTKHNVPEQRLNYFTEDVGLNH 230


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +1

Query: 37  CLLLVAYGSAFTLPLHENPVYGYLTKYGVPEAERIRKAEEAGLSNTRIVGGS 192
           C  +  Y S+  +      V  +L+     E   IRK +E+   +  I+GGS
Sbjct: 217 CTYVALYPSSVQVIALGVGVSNFLSSTRTAETGTIRKCDESSPHDQVIIGGS 268


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 371 VP*HSSAVAPELRP 412
           VP HS   +P+LRP
Sbjct: 217 VPKHSKTKSPKLRP 230


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 342 PRHERNGRSWFRDTLQR 392
           P H  +   WF+ ++QR
Sbjct: 122 PNHSSHEHPWFKKSVQR 138


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,833
Number of Sequences: 438
Number of extensions: 3728
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)