Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e13r
         (440 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    42   0.006
UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;...    33   3.6  
UniRef50_UPI00006CF808 Cluster: hypothetical protein TTHERM_0054...    32   4.7  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 41.9 bits (94), Expect = 0.006
 Identities = 21/62 (33%), Positives = 31/62 (50%)
 Frame = -3

Query: 357 RAVNVRYTAPXXXXXXXXXXXGSTQFASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVW 178
           + VNVRYT             GS Q A+ R   G +G   + +Q  +A  RGF + +++W
Sbjct: 103 QTVNVRYTGSSSIIILAVRAYGSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIW 162

Query: 177 GR 172
           GR
Sbjct: 163 GR 164


>UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 136

 Score = 32.7 bits (71), Expect = 3.6
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -3

Query: 279 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR*NAY 160
           A   R  GGVG++ V L+F +    G +F VQ++ R   Y
Sbjct: 97  AIASRVDGGVGYSNVTLKFKSQRSHGINFVVQIYARPRYY 136


>UniRef50_UPI00006CF808 Cluster: hypothetical protein
           TTHERM_00543650; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00543650 - Tetrahymena
           thermophila SB210
          Length = 1199

 Score = 32.3 bits (70), Expect = 4.7
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +1

Query: 85  KKWGERIFCANEKTKTS-CLCM*TSRICILASPNLYCKAKS 204
           + +  +  C  EK+K S CLC    + CI +  N YCK +S
Sbjct: 359 RNFNNQEICFTEKSKNSGCLCQENIQECIKSQKNKYCKDQS 399


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 392,132,747
Number of Sequences: 1657284
Number of extensions: 7038428
Number of successful extensions: 19518
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19503
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 22340008747
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)