Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e13r
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repe... 29 5.4
AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repe... 29 5.4
AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repe... 29 5.4
AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repe... 29 5.4
AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repe... 29 5.4
AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repe... 29 5.4
AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repe... 29 5.4
AK095887-1|BAC04641.1| 699|Homo sapiens protein ( Homo sapiens ... 29 5.4
BC075022-1|AAH75022.1| 543|Homo sapiens potassium channel, subf... 29 7.1
BC075021-1|AAH75021.1| 543|Homo sapiens potassium channel, subf... 29 7.1
AF385400-1|AAL95706.1| 543|Homo sapiens potassium channel TREK2... 29 7.1
AF385399-1|AAL95705.1| 543|Homo sapiens potassium channel TREK2... 29 7.1
AF279890-1|AAG15191.1| 538|Homo sapiens 2P domain potassium cha... 29 7.1
BC146666-1|AAI46667.1| 689|Homo sapiens SLC34A2 protein protein. 25 8.8
BC142704-1|AAI42705.1| 689|Homo sapiens SLC34A2 protein protein. 25 8.8
AF146796-1|AAF31328.1| 689|Homo sapiens sodium dependent phosph... 25 8.8
AF111856-1|AAC98695.1| 690|Homo sapiens sodium dependent phosph... 25 8.8
AK075015-1|BAC11354.1| 397|Homo sapiens protein ( Homo sapiens ... 25 9.2
AL109810-2|CAI19160.1| 746|Homo sapiens tripartite motif-contai... 29 9.4
AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens ... 29 9.4
>AY497060-1|AAS45485.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-P protein.
Length = 1472
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 947 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 986
>AY497059-1|AAS45484.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-O protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497058-1|AAS45483.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-N protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497057-1|AAS45482.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-M protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497056-1|AAS45481.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-L protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497055-1|AAS45480.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-K protein.
Length = 1472
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 947 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 986
>AY497054-1|AAS45479.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-I protein.
Length = 1472
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 947 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 986
>AY497053-1|AAS45478.1| 1472|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-H protein.
Length = 1472
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 947 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 986
>AY497052-1|AAS45477.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-G protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497051-1|AAS45476.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-F protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497050-1|AAS45475.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-E protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497049-1|AAS45474.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-D protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497048-1|AAS45473.1| 1398|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-C protein.
Length = 1398
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 873 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 912
>AY497047-1|AAS45472.1| 1631|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-B protein.
Length = 1631
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 1106 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 1145
>AY497046-1|AAS45471.1| 1802|Homo sapiens bromodomain and WD repeat
domain containing 3 variant BRWD3-A protein.
Length = 1802
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 1277 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 1316
>AK095887-1|BAC04641.1| 699|Homo sapiens protein ( Homo sapiens
cDNA FLJ38568 fis, clone HCHON2005987. ).
Length = 699
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 298 DADGPDASTGRRRVPHVDSPRVSCSSTAHNKACRKLVLVL 417
D+DGP S+GRR + C+ A K C++L+ ++
Sbjct: 590 DSDGPGTSSGRRVKCRGRRQSLKCNPDAWKKQCKELLSLI 629
>BC075022-1|AAH75022.1| 543|Homo sapiens potassium channel,
subfamily K, member 10, isoform 3 protein.
Length = 543
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 30 GPKKKDKEAS**IRESLIKKMGRTNFLCKRKNKNF-VSLHVNVQNMH 167
GP++ +K +++I K G T+ L KRKNK+ +L +VQ ++
Sbjct: 432 GPEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQKIY 478
>BC075021-1|AAH75021.1| 543|Homo sapiens potassium channel,
subfamily K, member 10, isoform 3 protein.
Length = 543
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 30 GPKKKDKEAS**IRESLIKKMGRTNFLCKRKNKNF-VSLHVNVQNMH 167
GP++ +K +++I K G T+ L KRKNK+ +L +VQ ++
Sbjct: 432 GPEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQKIY 478
>AF385400-1|AAL95706.1| 543|Homo sapiens potassium channel TREK2
splice variant c protein.
Length = 543
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 30 GPKKKDKEAS**IRESLIKKMGRTNFLCKRKNKNF-VSLHVNVQNMH 167
GP++ +K +++I K G T+ L KRKNK+ +L +VQ ++
Sbjct: 432 GPEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQKIY 478
>AF385399-1|AAL95705.1| 543|Homo sapiens potassium channel TREK2
splice variant b protein.
Length = 543
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 30 GPKKKDKEAS**IRESLIKKMGRTNFLCKRKNKNF-VSLHVNVQNMH 167
GP++ +K +++I K G T+ L KRKNK+ +L +VQ ++
Sbjct: 432 GPEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQKIY 478
>AF279890-1|AAG15191.1| 538|Homo sapiens 2P domain potassium
channel TREK2 protein.
Length = 538
Score = 29.1 bits (62), Expect = 7.1
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +3
Query: 30 GPKKKDKEAS**IRESLIKKMGRTNFLCKRKNKNF-VSLHVNVQNMH 167
GP++ +K +++I K G T+ L KRKNK+ +L +VQ ++
Sbjct: 427 GPEQLNKHGQGASEDNIINKFGSTSRLTKRKNKDLKKTLPEDVQKIY 473
>BC146666-1|AAI46667.1| 689|Homo sapiens SLC34A2 protein protein.
Length = 689
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 397 CKLCCEPCCYN*LAGCQR 344
C++CC CC L GC +
Sbjct: 621 CRVCCRACCL--LCGCPK 636
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 406 QVSCKLCCEPCC 371
Q+ C CC CC
Sbjct: 614 QMRCCCCCRVCC 625
>BC142704-1|AAI42705.1| 689|Homo sapiens SLC34A2 protein protein.
Length = 689
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 397 CKLCCEPCCYN*LAGCQR 344
C++CC CC L GC +
Sbjct: 621 CRVCCRACCL--LCGCPK 636
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 406 QVSCKLCCEPCC 371
Q+ C CC CC
Sbjct: 614 QMRCCCCCRVCC 625
>AF146796-1|AAF31328.1| 689|Homo sapiens sodium dependent phosphate
transporter isoform NaPi-IIb protein.
Length = 689
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 397 CKLCCEPCCYN*LAGCQR 344
C++CC CC L GC +
Sbjct: 621 CRVCCRACCL--LCGCPK 636
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 406 QVSCKLCCEPCC 371
Q+ C CC CC
Sbjct: 614 QMRCCCCCRVCC 625
>AF111856-1|AAC98695.1| 690|Homo sapiens sodium dependent phosphate
transporter isoform NaPi-3b protein.
Length = 690
Score = 25.4 bits (53), Expect(2) = 8.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 397 CKLCCEPCCYN*LAGCQR 344
C++CC CC L GC +
Sbjct: 622 CRVCCRACCL--LCGCPK 637
Score = 21.8 bits (44), Expect(2) = 8.8
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 406 QVSCKLCCEPCC 371
Q+ C CC CC
Sbjct: 615 QMRCCYCCRVCC 626
>AK075015-1|BAC11354.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ90534 fis, clone OVARC1000003, highly similar to
Homo sapiens sodium dependent phosphate transporter
isoform ).
Length = 397
Score = 25.4 bits (53), Expect(2) = 9.2
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -2
Query: 397 CKLCCEPCCYN*LAGCQR 344
C++CC CC L GC +
Sbjct: 329 CRVCCRACCL--LCGCPK 344
Score = 21.8 bits (44), Expect(2) = 9.2
Identities = 6/12 (50%), Positives = 7/12 (58%)
Frame = -2
Query: 406 QVSCKLCCEPCC 371
Q+ C CC CC
Sbjct: 322 QMRCCCCCRVCC 333
>AL109810-2|CAI19160.1| 746|Homo sapiens tripartite
motif-containing 67 protein.
Length = 746
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 185 CTVKLNPLRGAFTN*RFTKVKPTPPP 262
C +K +P RG F R + P PPP
Sbjct: 234 CQLKCHPSRGPFAKHRLVQPPPPPPP 259
>AK126782-1|BAC86689.1| 756|Homo sapiens protein ( Homo sapiens
cDNA FLJ44831 fis, clone BRACE3047482, moderately
similar to Homo sapiens tripartite motif-containing 9
(TRIM9). ).
Length = 756
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 185 CTVKLNPLRGAFTN*RFTKVKPTPPP 262
C +K +P RG F R + P PPP
Sbjct: 234 CQLKCHPSRGPFAKHRLVQPPPPPPP 259
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,028,677
Number of Sequences: 237096
Number of extensions: 1086209
Number of successful extensions: 2315
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2315
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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