Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e13f
         (471 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep: ...    42   0.007
UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;...    33   4.2  
UniRef50_UPI00006CF808 Cluster: hypothetical protein TTHERM_0054...    32   5.5  
UniRef50_Q4Q1E1 Cluster: Putative uncharacterized protein; n=3; ...    32   7.3  

>UniRef50_Q0MTA5 Cluster: HMG176; n=1; Helicoverpa armigera|Rep:
           HMG176 - Helicoverpa armigera (Cotton bollworm)
           (Heliothis armigera)
          Length = 176

 Score = 41.9 bits (94), Expect = 0.007
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +3

Query: 84  RAVNVRYTAPXXXXXXXXXXXXSTQFASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVW 263
           + VNVRYT              S Q A+ R   G +G   + +Q  +A  RGF + +++W
Sbjct: 103 QTVNVRYTGSSSIIILAVRAYGSGQGATARVVEGYLGRNSITIQLQSARGRGFHYRIEIW 162

Query: 264 GR 269
           GR
Sbjct: 163 GR 164


>UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 136

 Score = 32.7 bits (71), Expect = 4.2
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +3

Query: 162 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR*NAY 281
           A   R  GGVG++ V L+F +    G +F VQ++ R   Y
Sbjct: 97  AIASRVDGGVGYSNVTLKFKSQRSHGINFVVQIYARPRYY 136


>UniRef50_UPI00006CF808 Cluster: hypothetical protein
           TTHERM_00543650; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00543650 - Tetrahymena
           thermophila SB210
          Length = 1199

 Score = 32.3 bits (70), Expect = 5.5
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = -2

Query: 356 KKWGERIFCANEKTKTS-CLCM*TSRICILASPNLYCKAKS 237
           + +  +  C  EK+K S CLC    + CI +  N YCK +S
Sbjct: 359 RNFNNQEICFTEKSKNSGCLCQENIQECIKSQKNKYCKDQS 399


>UniRef50_Q4Q1E1 Cluster: Putative uncharacterized protein; n=3;
            Leishmania|Rep: Putative uncharacterized protein -
            Leishmania major
          Length = 2697

 Score = 31.9 bits (69), Expect = 7.3
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +3

Query: 402  FSDCKLLWQHYKLIS 446
            ++DCKLLWQHY+ +S
Sbjct: 2607 YADCKLLWQHYRSLS 2621


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,598,322
Number of Sequences: 1657284
Number of extensions: 7377616
Number of successful extensions: 19879
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 19314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19864
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26030843530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)