Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e13f
         (471 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.5  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   3.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.6  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.6  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.6  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    21   7.6  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.6  

>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 311  FLFFRLHKKFVLPIFLINDSRIYYEASLSF 400
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 311  FLFFRLHKKFVLPIFLINDSRIYYEASLSF 400
            F FF ++  FVL +FL+   + Y      F
Sbjct: 1270 FAFFMMNALFVLIVFLLTLKKDYLHIKWPF 1299


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 3.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 245 LYSTSLGTLKCIFWTFTCKDTKF 313
           L ST LGT   I+    CK+ +F
Sbjct: 50  LLSTILGTCWIIYVRIYCKEIRF 72


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 280 ILDVYMQRHEVFVFSFAQKIRSPHFFN 360
           + D++ + HE+ VFS   K   P++++
Sbjct: 235 VQDLHRRGHEIAVFSLTHK-EDPNYWS 260


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +1

Query: 280 ILDVYMQRHEVFVFSFAQKIRSPHFFN 360
           + D++ + HE+ VFS   K   P++++
Sbjct: 242 VQDLHRRGHEIAVFSLTHK-EDPNYWS 267


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 187  PPPVRRTLANCVDPRT 140
            PPP   T  + VDP++
Sbjct: 1806 PPPQHSTTQSLVDPKS 1821


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 257 SLGTLKCIFWTFTCKDTKFLFFRLHKKFVL 346
           S G+  CI   F   + K +   + KKF+L
Sbjct: 429 SAGSRNCIGQKFAMLEIKTVLCGILKKFIL 458


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 311  FLFFRLHKKFVLPIFLI 361
            F FF  +  FVL +FL+
Sbjct: 1270 FAFFMFNALFVLVVFLL 1286


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 311  FLFFRLHKKFVLPIFLI 361
            F FF  +  FVL +FL+
Sbjct: 1270 FAFFMFNALFVLVVFLL 1286


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 342 FSPFF*LMIRVFITKLPYLFF 404
           F P +   + +F+ ++P+ FF
Sbjct: 173 FLPVYVSYLLIFVQQIPFCFF 193


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +2

Query: 257 SLGTLKCIFWTFTCKDTKFLFFRLHKKFVL 346
           S G+  CI   F   + K +   + KKF+L
Sbjct: 429 SAGSRNCIGQKFAMLEIKTVLCGILKKFIL 458


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,677
Number of Sequences: 336
Number of extensions: 2005
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10931752
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)