Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11e13f
(471 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p pro... 31 1.0
AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-P... 31 1.0
AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p pro... 30 1.4
AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA... 30 1.4
AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-P... 30 1.4
AF273708-1|AAL35411.1| 118|Drosophila melanogaster PFTAIRE-inte... 24 3.5
AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA... 24 3.5
AY113517-1|AAM29522.1| 738|Drosophila melanogaster RE59932p pro... 28 7.3
AE014298-1309|AAF46469.1| 738|Drosophila melanogaster CG12121-P... 28 7.3
>BT023029-1|AAY55445.1| 112|Drosophila melanogaster IP04046p
protein.
Length = 112
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 162 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 269
AS GG G+ F + RG + TV++WGR
Sbjct: 77 ASPSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AE013599-1627|AAF58432.1| 112|Drosophila melanogaster CG13323-PA
protein.
Length = 112
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 162 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 269
AS GG G+ F + RG + TV++WGR
Sbjct: 77 ASPSLYSGGPGYRFATVNLRGQVNRGINSTVEIWGR 112
>AY102693-1|AAM27522.1| 433|Drosophila melanogaster LD45181p
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = -3
Query: 265 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 86
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 85 RELV 74
R++V
Sbjct: 176 RKIV 179
>AE014297-1932|AAF55129.1| 433|Drosophila melanogaster CG6912-PA
protein.
Length = 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/64 (29%), Positives = 23/64 (35%)
Frame = -3
Query: 265 PQTCTVKLNPLRGAFTN*RFTKVKPTPPPVRRTLANCVDPRTRTALTRLPAGAVYLTLTA 86
P T T P T T T P T P T LTR P G++Y
Sbjct: 117 PTTTTTTTEPTTTTTTT-EPTTTTTTTEPTTTTTTTTTAPPVITELTRCPPGSIYFDSQC 175
Query: 85 RELV 74
R++V
Sbjct: 176 RKIV 179
>AE013599-1628|AAF58431.1| 112|Drosophila melanogaster CG13324-PA
protein.
Length = 112
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +3
Query: 162 ASVRRTGGGVGFTFVNLQFVNAPRRGFSFTVQVWGR 269
AS GG G+ F + RG TV++WGR
Sbjct: 77 ASPSLYSGGPGYRFATVNLRGQVNRGIDSTVEIWGR 112
>AF273708-1|AAL35411.1| 118|Drosophila melanogaster
PFTAIRE-interacting factor 2 protein.
Length = 118
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 44 CKLCCEPCCYN*LAGCQREVHGAC 115
C CC PCC C G C
Sbjct: 81 CTPCCTPCCTPCCTPCCSPCCGPC 104
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 29 PVQVSCKLCCEPCC 70
P C CC PCC
Sbjct: 64 PCCTPCCKCCTPCC 77
>AE014297-475|AAF54113.3| 118|Drosophila melanogaster CG31483-PA
protein.
Length = 118
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 44 CKLCCEPCCYN*LAGCQREVHGAC 115
C CC PCC C G C
Sbjct: 81 CTPCCTPCCTPCCTPCCSPCCGPC 104
Score = 23.4 bits (48), Expect(2) = 3.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +2
Query: 29 PVQVSCKLCCEPCC 70
P C CC PCC
Sbjct: 64 PCCTPCCKCCTPCC 77
>AY113517-1|AAM29522.1| 738|Drosophila melanogaster RE59932p
protein.
Length = 738
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 269 LKCIFWTFTCKDTKFLFFRLHKKFVLPIFLINDSRIYYEASLSF 400
L +FW F K +K +++H + +FL + S +++ + F
Sbjct: 441 LSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHF 484
>AE014298-1309|AAF46469.1| 738|Drosophila melanogaster CG12121-PA
protein.
Length = 738
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/44 (25%), Positives = 23/44 (52%)
Frame = +2
Query: 269 LKCIFWTFTCKDTKFLFFRLHKKFVLPIFLINDSRIYYEASLSF 400
L +FW F K +K +++H + +FL + S +++ + F
Sbjct: 441 LSGLFWVFILKKSKHTVYKIHYLMAVLVFLKSLSLMFHSINYHF 484
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,282,223
Number of Sequences: 53049
Number of extensions: 348016
Number of successful extensions: 969
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 936
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1601407269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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