Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11e12r
         (315 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2; ...    83   9e-16
UniRef50_Q0UVC6 Cluster: Putative uncharacterized protein; n=1; ...    33   1.2  
UniRef50_A4J380 Cluster: YD repeat protein; n=1; Desulfotomaculu...    32   2.9  
UniRef50_Q7RYB7 Cluster: Predicted protein; n=1; Neurospora cras...    31   3.8  
UniRef50_Q0IBD7 Cluster: Phosphatidate cytidylyltransferase; n=2...    31   6.6  
UniRef50_A4XRA4 Cluster: Drug resistance transporter, Bcr/CflA s...    31   6.6  
UniRef50_Q3IP42 Cluster: Putative uncharacterized protein; n=1; ...    31   6.6  
UniRef50_A5K998 Cluster: Putative uncharacterized protein; n=1; ...    30   8.7  

>UniRef50_Q5MGF5 Cluster: Putative uncharacterized protein; n=2;
           Bombycoidea|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 74

 Score = 83.4 bits (197), Expect = 9e-16
 Identities = 39/74 (52%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
 Frame = -1

Query: 273 MGFFTALIVNIVGGAVLC-MGGFLIPIVAPLLGFXXXXXXXXXXXXXXXSYYGNLMAGSI 97
           MG   AL VN+VGGA++   GG L PIVAP+LGF               +YYGN++AGS+
Sbjct: 1   MGLLAALAVNLVGGAIIYGTGGLLTPIVAPMLGFGSAGIAAGSTAAAAQAYYGNVVAGSV 60

Query: 96  ISKLTAAAMIAPTP 55
           IS+LT+AAM+APTP
Sbjct: 61  ISQLTSAAMLAPTP 74


>UniRef50_Q0UVC6 Cluster: Putative uncharacterized protein; n=1;
           Phaeosphaeria nodorum|Rep: Putative uncharacterized
           protein - Phaeosphaeria nodorum (Septoria nodorum)
          Length = 887

 Score = 33.1 bits (72), Expect = 1.2
 Identities = 20/43 (46%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = +2

Query: 179 PSRGATIGIKNP-PMQRTAPPTMLTIRAV-KNPMILKSQ*LLT 301
           PS GA    ++P P    AP    T+R V KNP +LKS  LLT
Sbjct: 739 PSNGAAFAPRSPSPSPAPAPSLTATVRFVSKNPTLLKSSYLLT 781


>UniRef50_A4J380 Cluster: YD repeat protein; n=1; Desulfotomaculum
            reducens MI-1|Rep: YD repeat protein - Desulfotomaculum
            reducens MI-1
          Length = 2558

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -1

Query: 276  IMGFFTALIVNIVGGAVLCMGGFLIPIVAPLLG 178
            + G  TAL V ++GGA +  G +  P+VA L G
Sbjct: 2255 LYGGLTALAVGLIGGAAVGTGDYASPVVAALAG 2287


>UniRef50_Q7RYB7 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 247

 Score = 31.5 bits (68), Expect = 3.8
 Identities = 17/62 (27%), Positives = 29/62 (46%)
 Frame = -1

Query: 255 LIVNIVGGAVLCMGGFLIPIVAPLLGFXXXXXXXXXXXXXXXSYYGNLMAGSIISKLTAA 76
           +++ + G  +L + G L+  +   LGF               S  G++ AGS  + LT+A
Sbjct: 151 IVLGVTGIVILAVPGLLMTPILSGLGFGASGIAAGSMAAAIQSGIGSVAAGSAFAGLTSA 210

Query: 75  AM 70
           AM
Sbjct: 211 AM 212


>UniRef50_Q0IBD7 Cluster: Phosphatidate cytidylyltransferase; n=20;
           Cyanobacteria|Rep: Phosphatidate cytidylyltransferase -
           Synechococcus sp. (strain CC9311)
          Length = 306

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +2

Query: 131 WAEAAMLPAIIPDALKPSRGATI 199
           WA +  LPA++PDA+ P  GA I
Sbjct: 87  WANSGGLPALLPDAVLPLSGAAI 109


>UniRef50_A4XRA4 Cluster: Drug resistance transporter, Bcr/CflA
           subfamily precursor; n=1; Pseudomonas mendocina ymp|Rep:
           Drug resistance transporter, Bcr/CflA subfamily
           precursor - Pseudomonas mendocina ymp
          Length = 399

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/35 (37%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = -1

Query: 282 LRIMGFFTALIVN-IVGGAVLCMGGFLIPIVAPLL 181
           L ++G FTA++++ ++GG +   GG+  P+VA L+
Sbjct: 133 LTVLGMFTAIVLSPLLGGLLTQYGGWRAPLVASLV 167


>UniRef50_Q3IP42 Cluster: Putative uncharacterized protein; n=1;
           Natronomonas pharaonis DSM 2160|Rep: Putative
           uncharacterized protein - Natronomonas pharaonis (strain
           DSM 2160 / ATCC 35678)
          Length = 586

 Score = 30.7 bits (66), Expect = 6.6
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 315 GIVYLVRSYCDLRIMGFFTALIVNIVGGAVLCMGG 211
           G+V+ VR   +L  +G+   +   +VGG VL  GG
Sbjct: 93  GVVFFVRLAIELGWLGYLGRVAAGVVGGGVLFFGG 127


>UniRef50_A5K998 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 665

 Score = 30.3 bits (65), Expect = 8.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -3

Query: 118 EFNGRKHYIKVDCRRHDSTNSVRHY 44
           EFNGR HY+ V  +  DST++V HY
Sbjct: 593 EFNGRTHYVLVLSKGGDSTDAV-HY 616


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,471,934
Number of Sequences: 1657284
Number of extensions: 6305355
Number of successful extensions: 14886
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14879
length of database: 575,637,011
effective HSP length: 81
effective length of database: 441,397,007
effective search space used: 10152131161
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)